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| > .libPaths() | |
| [1] "/Users/ram/miniconda3/envs/conda-r-test/lib/R/library" | |
| > install.packages(tidyverse) | |
| also installing the dependencies ‘colorspace’, ‘sys’, ‘ps’, ‘highr’, ‘markdown’, ‘plyr’, ‘labeling’, ‘munsell’, ‘RColorBrewer’, ‘zeallot’, ‘askpass’, ‘rematch’, ‘prettyunits’, ‘processx’, ‘knitr’, ‘yaml’, ‘htmltools’, ‘evaluate’, ‘base64enc’, ‘tinytex’, ‘xfun’, ‘utf8’, ‘backports’, ‘generics’, ‘reshape2’, ‘assertthat’, ‘glue’, ‘pkgconfig’, ‘R6’, ‘Rcpp’, ‘tidyselect’, ‘BH’, ‘plogr’, ‘DBI’, ‘ellipsis’, ‘digest’, ‘gtable’, ‘lazyeval’, ‘scales’, ‘viridisLite’, ‘withr’, ‘vctrs’, ‘curl’, ‘mime’, ‘openssl’, ‘clipr’, ‘cellranger’, ‘progress’, ‘callr’, ‘fs’, ‘rmarkdown’, ‘whisker’, ‘selectr’, ‘stringi’, ‘fansi’, ‘pillar’, ‘broom’, ‘cli’, ‘crayon’, ‘dplyr’, ‘dbplyr’, ‘forcats’, ‘ggplot2’, ‘haven’, ‘hms’, ‘httr’, ‘jsonlite’, ‘lubridate’, ‘magrittr’, ‘modelr’, ‘purrr’, ‘readr’, ‘readxl’, ‘reprex’, ‘rlang’, ‘rstudioapi’, ‘rvest’, ‘stringr’, ‘tibble’, ‘tidyr’, ‘xml2’ | |
| .. | |
| messages about downloading packages | |
| .. | |
| * installing *source* package ‘utf8’ ... | |
| ** package ‘utf8’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c as_utf8.c -o as_utf8.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c bytes.c -o bytes.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c context.c -o context.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c init.c -o init.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c render.c -o render.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c render_table.c -o render_table.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c string.c -o string.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c text.c -o text.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8_encode.c -o utf8_encode.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8_format.c -o utf8_format.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8_normalize.c -o utf8_normalize.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8_valid.c -o utf8_valid.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8_width.c -o utf8_width.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c util.c -o util.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/array.c -o utf8lite/src/array.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/char.c -o utf8lite/src/char.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/encode.c -o utf8lite/src/encode.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/error.c -o utf8lite/src/error.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/escape.c -o utf8lite/src/escape.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/graph.c -o utf8lite/src/graph.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/render.c -o utf8lite/src/render.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/text.c -o utf8lite/src/text.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I/Users/ram/miniconda3/envs/conda-r-test/include -Iutf8lite/src -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o | |
| ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o | |
| clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Users/ram/miniconda3/envs/conda-r-test/lib/R/lib -Wl,-dead_strip_dylibs -headerpad_max_install_names -mmacosx-version-min=10.9 -lc++ -Wl,-rpath,/Users/ram/miniconda3/envs/conda-r-test/lib -L/Users/ram/miniconda3/envs/conda-r-test/lib -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/Users/ram/miniconda3/envs/conda-r-test/lib/R/lib -lR -Wl,-framework -Wl,CoreFoundation | |
| ld: warning: ignoring file ./libcutf8lite.a, file was built for archive which is not the architecture being linked (x86_64): ./libcutf8lite.a | |
| installing to /Users/ram/miniconda3/envs/conda-r-test/lib/R/library/utf8/libs | |
| ** R | |
| ** inst | |
| ** byte-compile and prepare package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| Error: package or namespace load failed for ‘utf8’ in dyn.load(file, DLLpath = DLLpath, ...): | |
| unable to load shared object '/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/utf8/libs/utf8.so': | |
| dlopen(/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/utf8/libs/utf8.so, 6): Symbol not found: _utf8lite_graph_measure | |
| Referenced from: /Users/ram/miniconda3/envs/conda-r-test/lib/R/library/utf8/libs/utf8.so | |
| Expected in: flat namespace | |
| in /Users/ram/miniconda3/envs/conda-r-test/lib/R/library/utf8/libs/utf8.so | |
| Error: loading failed | |
| Execution halted | |
| ERROR: loading failed | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/utf8’ | |
| ... | |
| ... | |
| * installing *source* package ‘jsonlite’ ... | |
| ** package ‘jsonlite’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c base64.c -o base64.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c collapse_array.c -o collapse_array.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c collapse_object.c -o collapse_object.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c collapse_pretty.c -o collapse_pretty.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c escape_chars.c -o escape_chars.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c integer64_to_na.c -o integer64_to_na.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c is_datelist.c -o is_datelist.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c is_recordlist.c -o is_recordlist.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c is_scalarlist.c -o is_scalarlist.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c modp_numtoa.c -o modp_numtoa.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c null_to_na.c -o null_to_na.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c num_to_char.c -o num_to_char.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c parse.c -o parse.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c prettify.c -o prettify.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c push_parser.c -o push_parser.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c r-base64.c -o r-base64.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c register.c -o register.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c row_collapse.c -o row_collapse.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c transpose_list.c -o transpose_list.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c validate.c -o validate.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c yajl/yajl.c -o yajl/yajl.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c yajl/yajl_buf.c -o yajl/yajl_buf.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c yajl/yajl_encode.c -o yajl/yajl_encode.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c yajl/yajl_gen.c -o yajl/yajl_gen.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c yajl/yajl_lex.c -o yajl/yajl_lex.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c yajl/yajl_parser.c -o yajl/yajl_parser.o | |
| clang -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -Iyajl/api -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -m64 -fPIC -c yajl/yajl_tree.c -o yajl/yajl_tree.o | |
| ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o | |
| clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Users/ram/miniconda3/envs/conda-r-test/lib/R/lib -Wl,-dead_strip_dylibs -headerpad_max_install_names -mmacosx-version-min=10.9 -lc++ -Wl,-rpath,/Users/ram/miniconda3/envs/conda-r-test/lib -L/Users/ram/miniconda3/envs/conda-r-test/lib -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/Users/ram/miniconda3/envs/conda-r-test/lib/R/lib -lR -Wl,-framework -Wl,CoreFoundation | |
| ld: warning: ignoring file yajl/libstatyajl.a, file was built for archive which is not the architecture being linked (x86_64): yajl/libstatyajl.a | |
| installing to /Users/ram/miniconda3/envs/conda-r-test/lib/R/library/jsonlite/libs | |
| ** R | |
| ** inst | |
| ** byte-compile and prepare package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| Error: package or namespace load failed for ‘jsonlite’ in dyn.load(file, DLLpath = DLLpath, ...): | |
| unable to load shared object '/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/jsonlite/libs/jsonlite.so': | |
| dlopen(/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/jsonlite/libs/jsonlite.so, 6): Symbol not found: _push_parser_get | |
| Referenced from: /Users/ram/miniconda3/envs/conda-r-test/lib/R/library/jsonlite/libs/jsonlite.so | |
| Expected in: flat namespace | |
| in /Users/ram/miniconda3/envs/conda-r-test/lib/R/library/jsonlite/libs/jsonlite.so | |
| Error: loading failed | |
| Execution halted | |
| ERROR: loading failed | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/jsonlite’ | |
| ... | |
| ... | |
| * installing *source* package ‘fs’ ... | |
| ** package ‘fs’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| clang++ -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/Rcpp/include" -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -stdlib=libc++ -m64 -fPIC -c error.cc -o error.o | |
| clang++ -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/Rcpp/include" -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -stdlib=libc++ -m64 -fPIC -c dir.cc -o dir.o | |
| clang++ -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/Rcpp/include" -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -stdlib=libc++ -m64 -fPIC -c utils.cc -o utils.o | |
| clang++ -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/Rcpp/include" -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -stdlib=libc++ -m64 -fPIC -c link.cc -o link.o | |
| clang++ -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/Rcpp/include" -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -stdlib=libc++ -m64 -fPIC -c path.cc -o path.o | |
| clang++ -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/Rcpp/include" -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -stdlib=libc++ -m64 -fPIC -c file.cc -o file.o | |
| clang++ -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/Rcpp/include" -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -stdlib=libc++ -m64 -fPIC -c fs.cc -o fs.o | |
| clang++ -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/Rcpp/include" -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -stdlib=libc++ -m64 -fPIC -c id.cc -o id.o | |
| clang++ -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/Rcpp/include" -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -stdlib=libc++ -m64 -fPIC -c unix/getmode.cc -o unix/getmode.o | |
| clang++ -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/Rcpp/include" -I/Users/ram/miniconda3/envs/conda-r-test/include -fPIC -mmacosx-version-min=10.9 -stdlib=libc++ -m64 -fPIC -c RcppExports.cpp -o RcppExports.o | |
| cp -p -f libuv/m4/lt_obsolete.m4 libuv/m4/lt~obsolete.m4 | |
| (cd libuv \ | |
| && touch aclocal.m4 \ | |
| && touch -r aclocal.m4 configure Makefile.in \ | |
| && CC="clang" CFLAGS="-mmacosx-version-min=10.9 -m64 -fPIC -fPIC " AR="ar" RANLIB="ranlib" LDFLAGS="-Wl,-dead_strip_dylibs -headerpad_max_install_names -mmacosx-version-min=10.9 -lc++ -Wl,-rpath,/Users/ram/miniconda3/envs/conda-r-test/lib -L/Users/ram/miniconda3/envs/conda-r-test/lib" ./configure --quiet) | |
| make --directory=libuv \ | |
| HAVE_DTRACE=0 | |
| make[1]: Entering directory '/private/var/folders/sm/8hlrh2655g7bycnj4lc7zcvm0000gn/T/RtmpBhHb7Z/R.INSTALL5cca7e012274/fs/src/libuv' | |
| CC src/libuv_la-fs-poll.lo | |
| CC src/libuv_la-inet.lo | |
| CC src/libuv_la-threadpool.lo | |
| CC src/libuv_la-uv-common.lo | |
| CC src/libuv_la-version.lo | |
| CC src/unix/libuv_la-async.lo | |
| CC src/unix/libuv_la-core.lo | |
| CC src/unix/libuv_la-dl.lo | |
| CC src/unix/libuv_la-fs.lo | |
| CC src/unix/libuv_la-getaddrinfo.lo | |
| CC src/unix/libuv_la-getnameinfo.lo | |
| CC src/unix/libuv_la-loop-watcher.lo | |
| CC src/unix/libuv_la-loop.lo | |
| CC src/unix/libuv_la-pipe.lo | |
| CC src/unix/libuv_la-poll.lo | |
| CC src/unix/libuv_la-process.lo | |
| CC src/unix/libuv_la-signal.lo | |
| CC src/unix/libuv_la-stream.lo | |
| CC src/unix/libuv_la-tcp.lo | |
| CC src/unix/libuv_la-thread.lo | |
| CC src/unix/libuv_la-timer.lo | |
| CC src/unix/libuv_la-tty.lo | |
| CC src/unix/libuv_la-udp.lo | |
| CC src/unix/libuv_la-bsd-ifaddrs.lo | |
| CC src/unix/libuv_la-darwin.lo | |
| CC src/unix/libuv_la-darwin-proctitle.lo | |
| CC src/unix/libuv_la-fsevents.lo | |
| CC src/unix/libuv_la-kqueue.lo | |
| CC src/unix/libuv_la-proctitle.lo | |
| CCLD libuv.la | |
| ar: `u' modifier ignored since `D' is the default (see `U') | |
| make[1]: Leaving directory '/private/var/folders/sm/8hlrh2655g7bycnj4lc7zcvm0000gn/T/RtmpBhHb7Z/R.INSTALL5cca7e012274/fs/src/libuv' | |
| clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Users/ram/miniconda3/envs/conda-r-test/lib/R/lib -Wl,-dead_strip_dylibs -headerpad_max_install_names -mmacosx-version-min=10.9 -lc++ -Wl,-rpath,/Users/ram/miniconda3/envs/conda-r-test/lib -L/Users/ram/miniconda3/envs/conda-r-test/lib -o fs.so error.o dir.o utils.o link.o path.o file.o fs.o id.o unix/getmode.o RcppExports.o ./libuv/.libs/libuv.a -pthread -L/Users/ram/miniconda3/envs/conda-r-test/lib/R/lib -lR -Wl,-framework -Wl,CoreFoundation | |
| ld: warning: ignoring file ./libuv/.libs/libuv.a, file was built for archive which is not the architecture being linked (x86_64): ./libuv/.libs/libuv.a | |
| installing to /Users/ram/miniconda3/envs/conda-r-test/lib/R/library/fs/libs | |
| ** R | |
| ** inst | |
| ** byte-compile and prepare package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| Error: package or namespace load failed for ‘fs’ in dyn.load(file, DLLpath = DLLpath, ...): | |
| unable to load shared object '/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/fs/libs/fs.so': | |
| dlopen(/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/fs/libs/fs.so, 6): Symbol not found: _uv_default_loop | |
| Referenced from: /Users/ram/miniconda3/envs/conda-r-test/lib/R/library/fs/libs/fs.so | |
| Expected in: flat namespace | |
| in /Users/ram/miniconda3/envs/conda-r-test/lib/R/library/fs/libs/fs.so | |
| Error: loading failed | |
| Execution halted | |
| ERROR: loading failed | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/fs’ | |
| ... | |
| ... | |
| ERROR: dependencies ‘fs’, ‘rmarkdown’ are not available for package ‘reprex’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/reprex’ | |
| ERROR: dependency ‘httr’ is not available for package ‘rvest’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/rvest’ | |
| ERROR: dependency ‘pillar’ is not available for package ‘tibble’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/tibble’ | |
| ERROR: dependency ‘tibble’ is not available for package ‘cellranger’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/cellranger’ | |
| ERROR: dependency ‘tibble’ is not available for package ‘dplyr’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/dplyr’ | |
| ERROR: dependency ‘tibble’ is not available for package ‘forcats’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/forcats’ | |
| ERROR: dependency ‘tibble’ is not available for package ‘ggplot2’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/ggplot2’ | |
| ERROR: dependency ‘tibble’ is not available for package ‘readr’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/readr’ | |
| ERROR: dependencies ‘dplyr’, ‘tibble’ are not available for package ‘dbplyr’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/dbplyr’ | |
| ERROR: dependencies ‘forcats’, ‘readr’, ‘tibble’ are not available for package ‘haven’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/haven’ | |
| ERROR: dependencies ‘cellranger’, ‘tibble’ are not available for package ‘readxl’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/readxl’ | |
| ERROR: dependencies ‘dplyr’, ‘tibble’ are not available for package ‘tidyr’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/tidyr’ | |
| ERROR: dependencies ‘dplyr’, ‘tibble’, ‘tidyr’ are not available for package ‘broom’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/broom’ | |
| ERROR: dependencies ‘broom’, ‘dplyr’, ‘tibble’, ‘tidyr’ are not available for package ‘modelr’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/modelr’ | |
| ERROR: dependencies ‘broom’, ‘dplyr’, ‘dbplyr’, ‘forcats’, ‘ggplot2’, ‘haven’, ‘httr’, ‘jsonlite’, ‘lubridate’, ‘modelr’, ‘readr’, ‘readxl’, ‘reprex’, ‘rvest’, ‘tibble’, ‘tidyr’ are not available for package ‘tidyverse’ | |
| * removing ‘/Users/ram/miniconda3/envs/conda-r-test/lib/R/library/tidyverse’ | |
| The downloaded source packages are in | |
| ‘/private/var/folders/sm/8hlrh2655g7bycnj4lc7zcvm0000gn/T/RtmpUbjNLG/downloaded_packages’ | |
| Updating HTML index of packages in '.Library' | |
| Making 'packages.html' ... done | |
| There were 23 warnings (use warnings() to see them) | |
| > warnings() | |
| Warning messages: | |
| 1: In install.packages("tidyverse") : | |
| installation of package ‘utf8’ had non-zero exit status | |
| 2: In install.packages("tidyverse") : | |
| installation of package ‘jsonlite’ had non-zero exit status | |
| 3: In install.packages("tidyverse") : | |
| installation of package ‘fs’ had non-zero exit status | |
| 4: In install.packages("tidyverse") : | |
| installation of package ‘openssl’ had non-zero exit status | |
| 5: In install.packages("tidyverse") : | |
| installation of package ‘lubridate’ had non-zero exit status | |
| 6: In install.packages("tidyverse") : | |
| installation of package ‘rmarkdown’ had non-zero exit status | |
| 7: In install.packages("tidyverse") : | |
| installation of package ‘pillar’ had non-zero exit status | |
| 8: In install.packages("tidyverse") : | |
| installation of package ‘httr’ had non-zero exit status | |
| 9: In install.packages("tidyverse") : | |
| installation of package ‘reprex’ had non-zero exit status | |
| 10: In install.packages("tidyverse") : | |
| installation of package ‘rvest’ had non-zero exit status | |
| 11: In install.packages("tidyverse") : | |
| installation of package ‘tibble’ had non-zero exit status | |
| 12: In install.packages("tidyverse") : | |
| installation of package ‘cellranger’ had non-zero exit status | |
| 13: In install.packages("tidyverse") : | |
| installation of package ‘dplyr’ had non-zero exit status | |
| 14: In install.packages("tidyverse") : | |
| installation of package ‘forcats’ had non-zero exit status | |
| 15: In install.packages("tidyverse") : | |
| installation of package ‘ggplot2’ had non-zero exit status | |
| 16: In install.packages("tidyverse") : | |
| installation of package ‘readr’ had non-zero exit status | |
| 17: In install.packages("tidyverse") : | |
| installation of package ‘dbplyr’ had non-zero exit status | |
| 18: In install.packages("tidyverse") : | |
| installation of package ‘haven’ had non-zero exit status | |
| 19: In install.packages("tidyverse") : | |
| installation of package ‘readxl’ had non-zero exit status | |
| 20: In install.packages("tidyverse") : | |
| installation of package ‘tidyr’ had non-zero exit status | |
| 21: In install.packages("tidyverse") : | |
| installation of package ‘broom’ had non-zero exit status | |
| 22: In install.packages("tidyverse") : | |
| installation of package ‘modelr’ had non-zero exit status | |
| 23: In install.packages("tidyverse") : | |
| installation of package ‘tidyverse’ had non-zero exit status |
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