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@jblachly
jblachly / bcl2fastq build ubuntu 16 LTS.md
Last active Aug 5, 2020
How to build bcl2fastq2 on Ubuntu 16 LTS
View bcl2fastq build ubuntu 16 LTS.md

1. Make sure configure can find sys/stat.h:

Modify bcl2fastq/src/cmake/macros.cmake

Find the last block:

#
# Macro to find libraries, with support for static-only search
#
macro(bcl2fastq_find_header_or_die variable file)
@hadley
hadley / curriculum.md
Created Sep 27, 2013
My first stab at a basic R programming curriculum. I think teaching just these topics without overall motivating examples would be extremely boring, but if you're a self-taught R user, this might be useful to help spot your gaps.
View curriculum.md

Notes:

  • I've tried to break up in to separate pieces, but it's not always possible: e.g. knowledge of data structures and subsetting are tidy intertwined.

  • Level of Bloom's taxonomy listed in square brackets, e.g. http://bit.ly/15gqPEx. Few categories currently assess components higher in the taxonomy.

Programming R curriculum

Data structures

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