SamStudio8

# Nicer syntax but leads to ugly job names,
# and doesn't work when variables strings are long
# See https://gitlab.com/gitlab-org/gitlab/-/issues/362262
my-job:
  extends: base-job
  parallel:
    matrix:
      - OWLS: 1
        CATS: 0
      - OWLS: 0

SamStudio8

#!/usr/bin/env bash
# Name subset_xam
# Description Safely subset a BAM (or CRAM) with samtools+picard
# Author @samstudio8
# Date 2022-11-01
# Version 1.0.3
PICARD_JAR=${PICARD_JAR:-}
xam=$1
ref=$2
seq=$3

SamStudio8

---
title: "Samposium v1"
url: "/v1/"
layout: "old_archive"
---

This listing enumerates the posts from the previous iteration of Samposium.
Posts range between long rambling posts about my PhD that I never expected anyone to read, and things that I did to distract myself from finishing my PhD that I hoped people would read.
Each link will take you to a static snapshot of the decommissioned Wordpress post.