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Snipa22/gist:c981ece43b870645a3ddbaa4d57d89bd

Created April 5, 2016 01:12
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gistfile1.txt
>>> p.print_stats()
Tue Apr 5 00:50:34 2016 profile_data
980097047 function calls (958288563 primitive calls) in 3900.461 seconds
Ordered by: internal time
ncalls tottime percall cumtime percall filename:lineno(function)
8174838 629.375 0.000 1172.544 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:543(fillFormat)
10896000 184.174 0.000 553.155 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/connections/full.py:21(_backwardImplementation)
13620000 178.223 0.000 340.306 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/modules/module.py:82(reset)
24468095 176.095 0.000 176.095 0.000 {method 'reduce' of 'numpy.ufunc' objects}
10896000 159.529 0.000 212.994 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py:1015(outer)
54480254 127.864 0.000 127.864 0.000 {numpy.core.multiarray.zeros}
2724000 101.215 0.000 3674.851 0.001 /usr/local/lib/python2.7/site-packages/pybrain/supervised/trainers/backprop.py:78(_calcDerivs)
2724000 96.942 0.000 831.338 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/networks/recurrent.py:99(_backwardImplementation)
2724000 93.780 0.000 167.786 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:594(__call__)
21797690 92.665 0.000 216.293 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py:2576(seterr)
21796004 89.330 0.000 89.330 0.000 {method 'reshape' of 'numpy.ndarray' objects}
2724946 82.049 0.000 1691.236 0.001 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:237(_array2string)
10899984 79.226 0.000 176.476 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/connections/full.py:18(_forwardImplementation)
13620000/2724000 76.364 0.000 858.414 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/modules/module.py:75(backward)
2724996 71.727 0.000 432.513 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/networks/recurrent.py:76(_forwardImplementation)
1000 69.267 0.069 3869.007 3.869 /usr/local/lib/python2.7/site-packages/pybrain/supervised/trainers/backprop.py:48(train)
21797690 69.189 0.000 74.079 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py:2676(geterr)
10896000 64.582 0.000 617.737 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/connections/connection.py:80(backward)
21795984 62.884 0.000 62.884 0.000 {numpy.core.multiarray.dot}
2724946 53.864 0.000 93.084 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:635(__init__)
2724000 50.960 0.000 58.866 0.000 /usr/local/lib/python2.7/site-packages/pybrain/auxiliary/gradientdescent.py:54(__call__)
10899984 49.971 0.000 226.447 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/connections/connection.py:68(forward)
13624980/2724996 47.024 0.000 447.305 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/modules/module.py:70(forward)
8174838 43.967 0.000 1216.511 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:529(__init__)
2724000 43.616 0.000 43.616 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/modules/sigmoidlayer.py:13(_backwardImplementation)
21796004 43.378 0.000 132.708 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/fromnumeric.py:128(reshape)
10896000 42.951 0.000 42.951 0.000 {method 'flatten' of 'numpy.ndarray' objects}
8174840 42.163 0.000 42.163 0.000 {method 'compress' of 'numpy.ndarray' objects}
2724996 38.946 0.000 70.858 0.000 /usr/local/lib/python2.7/site-packages/pybrain/tools/functions.py:54(sigmoid)
21797691 35.913 0.000 35.913 0.000 {numpy.core.umath.seterrobj}
27241004 35.675 0.000 46.573 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py:414(asarray)
2724996 33.845 0.000 493.948 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/networks/recurrent.py:60(forward)
2724000 33.595 0.000 926.734 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/networks/recurrent.py:53(backActivate)
5390564 32.292 0.000 40.211 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:628(_digits)
10898845 29.633 0.000 130.401 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py:2972(__exit__)
2724011 28.368 0.000 28.369 0.000 {sum}
54492464/54492452 26.743 0.000 26.743 0.000 {getattr}
2724946 26.649 0.000 209.590 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:458(_formatArray)
2724000 26.517 0.000 366.823 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/networks/network.py:146(reset)
10898845 26.128 0.000 141.653 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py:2967(__enter__)
24516970 25.141 0.000 25.141 0.000 {method 'ravel' of 'numpy.ndarray' objects}
2724996 24.962 0.000 526.933 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/networks/recurrent.py:47(activate)
2725007 24.321 0.000 24.321 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/parametercontainer.py:78(resetDerivatives)
2726838/2724946 23.870 0.000 1718.145 0.001 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:340(array2string)
2724946 23.587 0.000 795.094 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:696(__init__)
10898845 22.528 0.000 27.080 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py:2963(__init__)
8120160 22.361 0.000 157.098 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/fromnumeric.py:1892(any)
8172996 21.607 0.000 21.607 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/networks/network.py:29(__setOffset)
73597143/73595876 21.061 0.000 21.067 0.000 {len}
2724000 18.913 0.000 21.766 0.000 /usr/local/lib/python2.7/site-packages/pybrain/datasets/dataset.py:217(getLinked)
43595382 18.526 0.000 18.526 0.000 {numpy.core.umath.geterrobj}
10845142 18.427 0.000 24.131 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py:484(asanyarray)
46315968 17.419 0.000 17.419 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/networks/network.py:26(__getOffset)
2724000 17.255 0.000 884.788 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/networks/recurrent.py:68(backward)
38086258 16.602 0.000 16.602 0.000 {numpy.core.multiarray.array}
3 16.066 5.355 16.066 5.355 {method 'execute' of 'psycopg2.extensions.cursor' objects}
8120160 15.996 0.000 115.053 0.000 {method 'any' of 'numpy.ndarray' objects}
2724996 14.669 0.000 31.912 0.000 /usr/local/lib/python2.7/site-packages/pybrain/tools/functions.py:49(safeExp)
5448000 13.329 0.000 13.329 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/modules/linearlayer.py:12(_backwardImplementation)
10841389 13.157 0.000 13.157 0.000 {max}
2724996 12.938 0.000 12.938 0.000 {method 'clip' of 'numpy.ndarray' objects}
5449992 12.368 0.000 12.368 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/modules/linearlayer.py:9(_forwardImplementation)
27244000 10.797 0.000 10.797 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/parametercontainer.py:43(params)
2724996 10.635 0.000 81.494 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/modules/sigmoidlayer.py:10(_forwardImplementation)
5448997 10.472 0.000 10.472 0.000 {method 'copy' of 'numpy.ndarray' objects}
2724946 10.066 0.000 13.867 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:685(__init__)
13535915 9.838 0.000 9.838 0.000 {method 'rstrip' of 'str' objects}
2724946 8.637 0.000 8.637 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:713(__init__)
8133053 8.620 0.000 8.620 0.000 {min}
8120160 8.292 0.000 99.057 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/_methods.py:37(_any)
2724969 8.271 0.000 22.212 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/fromnumeric.py:1383(ravel)
10897314/10897254 8.247 0.000 8.249 0.000 {issubclass}
13620010 7.183 0.000 7.183 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/parametercontainer.py:67(derivs)
2724946 6.757 0.000 8.921 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:450(_extendLine)
8174838 6.419 0.000 6.419 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:657(__init__)
2724996 5.891 0.000 5.891 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/modules/biasunit.py:15(_forwardImplementation)
5455511 5.309 0.000 5.309 0.000 {range}
2726838/2724946 5.236 0.000 1723.378 0.001 /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py:1835(array_str)
2750592/2750590 4.577 0.000 4.584 0.000 {isinstance}
10899292 4.552 0.000 4.552 0.000 {method 'pop' of 'dict' objects}
5450001 4.549 0.000 4.549 0.000 /usr/local/lib/python2.7/site-packages/pybrain/datasets/dataset.py:157(getLength)
2724000 4.486 0.000 5.313 0.000 /usr/local/lib/python2.7/site-packages/pybrain/structure/networks/recurrent.py:73(_isLastTimestep)
2724996 4.305 0.000 17.243 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/fromnumeric.py:1686(clip)
2725000 3.998 0.000 31.190 0.000 /usr/local/lib/python2.7/site-packages/pybrain/datasets/dataset.py:47(__iter__)
1365 3.457 0.003 36.906 0.027 {map}
111844 3.061 0.000 4.004 0.000 /usr/local/lib/python2.7/site-packages/django/db/models/base.py:388(__init__)
2724958 3.045 0.000 3.045 0.000 {_functools.reduce}
2725000 2.757 0.000 5.424 0.000 /usr/local/lib/python2.7/site-packages/pybrain/datasets/dataset.py:262(endOfData)
1000 2.571 0.003 2.896 0.003 /usr/local/lib/python2.7/random.py:277(shuffle)
2724946 2.197 0.000 2.197 0.000 /usr/local/lib/python2.7/site-packages/numpy/core/arrayprint.py:734(__init__)
1 2.129 2.129 3884.264 3884.264 ./history/models.py:503(get_nn)
1121 1.350 0.001 2.116 0.002 {method 'fetchmany' of 'psycopg2.extensions.cursor' objects}
2724000 1.172 0.000 1.172 0.000 /usr/local/lib/python2.7/site-packages/pybrain/datasets/supervised.py:64(<lambda>)
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