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❯ gdb ./md task3 82ac80d ✗ | |
GNU gdb (GDB) 7.5 | |
Copyright (C) 2012 Free Software Foundation, Inc. | |
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html> | |
This is free software: you are free to change and redistribute it. | |
There is NO WARRANTY, to the extent permitted by law. Type "show copying" | |
and "show warranty" for details. | |
This GDB was configured as "x86_64-unknown-linux-gnu". | |
For bug reporting instructions, please see: | |
<http://www.gnu.org/software/gdb/bugs/>... | |
Reading symbols from /local/pcs_ua/pcs13_19/Labs/Lab2/MolDyn/md...done. | |
(gdb) watch f_accumulation[0][1394] | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
(gdb) r | |
Starting program: /local/pcs_ua/pcs13_19/Labs/Lab2/MolDyn/md | |
[Thread debugging using libthread_db enabled] | |
Using host libthread_db library "/lib64/libthread_db.so.1". | |
Molecular Dynamics Simulation example program | |
--------------------------------------------- | |
number of particles is ............ 13500 | |
side length of the box is ......... 25.323179 | |
cut off is ........................ 3.750000 | |
reduced temperature is ............ 0.722000 | |
basic timestep is ................. 0.064000 | |
temperature scale interval ........ 10 | |
stop scaling at move .............. 20 | |
print interval .................... 5 | |
total no. of steps ................ 20 | |
i ke pe e temp pres vel rp | |
----- ---------- ---------- ---------- -------- -------- -------- ---- | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = <unreadable> | |
New value = 0 | |
L_main_128__par_region0_2_75 () at main.c:135 | |
135 for (i = 0; i < num_threads; i++) | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0 | |
New value = 3.2186704024134878e-57 | |
0x00000035b2c8e6df in __memset_x86_64 () from /lib64/libc.so.6 | |
(gdb) c | |
Continuing. | |
before forces in main: f[ii] = 0.00000000000000000000, f_a[ii] = 0.00000000000000000000 | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 3.2186704024134878e-57 | |
New value = 9.6628030960322677e-08 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 9.6628030960322677e-08 | |
New value = 0.00075563692285537172 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.00075563692285537172 | |
New value = -1.0562191859471437e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -1.0562191859471437e-05 | |
New value = -5.4163664839624227e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -5.4163664839624227e-05 | |
New value = 0.00010385563692257469 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.00010385563692257469 | |
New value = -5.3089004413032744e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -5.3089004413032744e-05 | |
New value = -5.4253550936388433e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -5.4253550936388433e-05 | |
New value = 0.00010022927042627636 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.00010022927042627636 | |
New value = -5.7336213366367551e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -5.7336213366367551e-05 | |
New value = -6.5739816946191063e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -6.5739816946191063e-05 | |
New value = 0.011350984887197787 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.011350984887197787 | |
New value = 0.011450963157510274 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.011450963157510274 | |
New value = 0.011350662605806954 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.011350662605806954 | |
New value = -0.00034586502829251839 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00034586502829251839 | |
New value = -0.0078432182577748352 | |
forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) at forces.c:13 | |
13 for (i=0; i<npart*3; i+=3) { | |
(gdb) c | |
Continuing. | |
=========f_a[0][1394] = -0.00784321825777483522 | |
in forces : f[ii] = -0.00784321825777483522, f_a[ii] = -0.00784321825777483522 | |
after forces in main : f[ii] = -0.00784321825777483522, f_a[ii] = -0.00784321825777483522 | |
-------------------------------------------------- | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.0078432182577748352 | |
New value = 3.2186704024134878e-57 | |
0x00000035b2c8e6df in __memset_x86_64 () from /lib64/libc.so.6 | |
(gdb) c | |
Continuing. | |
before forces in main: f[ii] = 0.00000000000000000000, f_a[ii] = 0.00000000000000000000 | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 3.2186704024134878e-57 | |
New value = 1.938927633459364e-07 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 1.938927633459364e-07 | |
New value = 0.00072209463806060105 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.00072209463806060105 | |
New value = -2.0311409687721535e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -2.0311409687721535e-05 | |
New value = -0.00010060481489796058 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00010060481489796058 | |
New value = 5.7966601979057931e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 5.7966601979057931e-05 | |
New value = -9.8480318898034369e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -9.8480318898034369e-05 | |
New value = -0.00010070653318253138 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00010070653318253138 | |
New value = 5.0896085729059548e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 5.0896085729059548e-05 | |
New value = -0.00010677186065530752 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00010677186065530752 | |
New value = -0.00012308773638087297 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00012308773638087297 | |
New value = 0.011017920061816802 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.011017920061816802 | |
New value = 0.011118022580452677 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.011118022580452677 | |
New value = 0.011017227114749582 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.011017227114749582 | |
New value = -0.00066401718458766745 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00066401718458766745 | |
New value = -0.016738278278316247 | |
forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) at forces.c:13 | |
13 for (i=0; i<npart*3; i+=3) { | |
(gdb) c | |
Continuing. | |
=========f_a[0][1394] = -0.01673827827831624732 | |
in forces : f[ii] = -0.01673827827831624732, f_a[ii] = -0.01673827827831624732 | |
after forces in main : f[ii] = -0.01673827827831624732, f_a[ii] = -0.01673827827831624732 | |
-------------------------------------------------- | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.016738278278316247 | |
New value = 3.2186704024134878e-57 | |
0x00000035b2c8e6df in __memset_x86_64 () from /lib64/libc.so.6 | |
(gdb) c | |
Continuing. | |
before forces in main: f[ii] = 0.00000000000000000000, f_a[ii] = 0.00000000000000000000 | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 3.2186704024134878e-57 | |
New value = 2.9338949131182376e-07 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 2.9338949131182376e-07 | |
New value = 0.00069039606387593462 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.00069039606387593462 | |
New value = -2.9227161792726728e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -2.9227161792726728e-05 | |
New value = -0.00014011914613065626 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00014011914613065626 | |
New value = 1.8960408092219517e-05 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 1.8960408092219517e-05 | |
New value = -0.00013699905590998287 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00013699905590998287 | |
New value = -0.00014017772326436654 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00014017772326436654 | |
New value = 8.6250167081086714e-06 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 8.6250167081086714e-06 | |
New value = -0.00014911557673938394 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00014911557673938394 | |
New value = -0.00017282172054241963 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = -0.00017282172054241963 | |
New value = 0.010688840708506947 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] | |
Old value = 0.010688840708506947 | |
New value = 0.010789019876857773 | |
0x0000000000403277 in forces (npart=13500, x=0x7ffffff0fce0, f=0x7ffffffae020, side=25.323178916891326, rcoff=3.75) | |
at forces.c:59 | |
59 f_accumulation[thread_num][j+2] -= zz*r148; | |
(gdb) c | |
Continuing. | |
Hardware watchpoint 1: f_accumulation[0][1394] |
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