TATABOX42

import re
from string import digits, punctuation
from nltk.stem import SnowballStemmer
from nltk.tokenize import word_tokenize


class ProcessTextMethods:
    def __init__(self):
        self.stemmer = SnowballStemmer("english")
        self.emoji_pattern = re.compile("["

TATABOX42

TATABOX42

import tornado.ioloop
import tornado.web
import urllib2 as urllib                        
from PIL import Image
from cStringIO import StringIO
import numpy as np
import tesserwrap
import cv2

class MainHandler(tornado.web.RequestHandler):

TATABOX42

# ***********************************************
# ***********************************************
# Author: Benjamin Tovar
# Date: April 20, 2015
# Post: http://btovar.com/2015/04/introduction-to-k-means-in-r/ ‎
# ***********************************************
# ***********************************************

library(ggplot2)
library(reshape)

TATABOX42

# **********************************
# Author: Benjamin Tovar
# Date: March 25, 2015
# Post: Using Neural Networks to fit equations in R
# Post url: http://btovar.com/2015/03/neural-networks-fit-eq/
# **********************************

# load libraries
library(RSNNS
library(ggplot2)

TATABOX42

>gi|1620934|emb|Z80230.1| Calliphora vicina trp gene
AAAAGTTTAAATTGGATAAATTGCAAAAGGACAATTAAGGATACGGAATATATGCGTAGTTTGTGTAAAA
TGCGCTTATAGAAACACAGAAAAAAAAAATAAAAACGGATAAATCTTTAGAAACAATAAACACTAGCTTA
AAAATTAAAAGCAAAACAAACAATAAAACATGGCAACTGATCCGGAAAAAGGGAAAAATGAGGAAGAAAA
CTATAATATACAGTTTGCAGATGAATACGTGTTGACGGAGACAGAGAAAACCTTTATATTGGCTTGTGAG
CGCGGTGACATAGCAAGTGTCAAGGTAATAATTGAGGAAAATAAAGGTGCACCGGAAAAGTTTAATATTA
ATTGTGTTGATCCCATGAATCGTTCGGCCTTAATATCAGCCATTGAAAATGAAAATTTTGATTTAATGAT
TGTACTGTTGGAGGAAGGCATAGATGTGGGCGATGCATTGTTGCATGCTATTTCTGAAGAATATGTGGAG
GCTGTGGAGGAACTGTTGCAATGGGAAGAAACGCATCATAAGGAGGGTACACCATATAGTTGGGAGGCAG
TTGATCGTTCGAAATCGACATTTACGCCTGATATAACGCCTCTAATATTGGCAGCACATCGTAACAATTA

TATABOX42

# ******************************************************************************
#       FUNCTION: extract.five.utr.sequence | JULY/29/2012 | BENJAMIN TOVAR
# ******************************************************************************

extract.five.utr.sequence <- function(gene.list.refseq,
                                      number.bases.upstream=1000){
    
    # Author: Benjamin Tovar
    # Date: July 29, 2012
    # Post: http://btovar.com/2015/03/extracting-upstream-regions/

TATABOX42

#    Author: Benjamin Tovar
#    Date: March 14, 2015
#    Post: http://btovar.com/2015/03/markov-chains-in-r 
#
#    Example of a Markov Chain of zero order (the current nucleotide is
#    totally independent of the previous nucleotide).

# ***********************************************************************
# ***********************************************************************

TATABOX42

#
# PREDICTING LONG TERM CUSTOMER VALUE WITH BTYD PACKAGE
# Pareto/NBD (negative binomial distribution) modeling of 
# repeat-buying behavior in a noncontractual setting
#
# Matthew Baggott, matt@baggott.net
#
# Accompanying slides at:
# http://www.slideshare.net/mattbagg/baggott-predict-customerinrpart1#
#

TATABOX42

package crappyBird;

import java.awt.Graphics;
import java.awt.Rectangle;
import java.awt.event.ActionEvent;
import java.awt.event.ActionListener;
import java.awt.image.BufferedImage;
import java.io.IOException;
import java.net.URL;