Cases the script can't handle

These double includes weren't handlec by the script. If one of them is actually correct, please comment

Unuccessful typo corrections:9

./math/mathcore/inc/Math/BasicMinimizer.h:
ROOT_Math_MinimizerVariable
ROOT_Math_MinimTransformVariable

./math/mathcore/inc/Math/MinimTransformFunction.h:
ROOT_Math_MinimizerVariable
ROOT_Math_MinimTransformVariable

./math/mathcore/src/MinimizerOptions.cxx:
ROOT_TEnv
MATH_NO_PLUGIN_MANAGER

./math/smatrix/inc/Math/SVector.h:
ROOT_Math_Functions
ROOT_Math_MatrixFunctions

./math/mathmore/inc/Math/GSLNLSMinimizer.h:
ROOT_Math_MinimizerVariable
ROOT_Math_MinimTransformVariable

./io/io/inc/TMakeProject.h:
ROOT_TString
ROOT_TOBJECT_H

./tmva/tmva/inc/TMVA/Envelope.h:
ROOT_TMVA_DataLoader
ROOT_TMVA_ROCCurve

./hist/histpainter/inc/TGraphPainter.h:
ROOT_TVirtualGraphPainter
ROOT_Object

./graf2d/cocoa/src/CocoaPrivate.h:
ROOT_FontCache
ROOT_GuiFonts

Found typos (could have false positives, please check)

Dubious typo corrections:43

./graf3d/gl/inc/CsgOps.h
ROOT_Rtypes
ROOT_Rtype

./graf3d/gl/inc/TGLMarchingCubes.h
ROOT_TTKDEAdapter
ROOT_TKDEAdapter

./graf3d/gl/inc/TGLPadUtils.h
ROOT_Stipples
ROOT_RStipples

./graf3d/gl/inc/TGLPlotPainter.h
ROOT_TGLPlotFrame
ROOT_TGLPlotBox

./graf3d/g3d/inc/TPolyLine3D.h
ROOT_TString
ROOT_TTString

./graf3d/g3d/inc/TSPHE.h
ROOT_TShape
ROOT_TBRIK

./gui/sessionviewer/inc/TSessionLogView.h
ROOT_TGTextView
ROOT_TTextView

./tree/treeplayer/inc/TTreeFormula.h
ROOT_TFormula
ROOT_v5_TFormula

./tree/treeviewer/inc/TSpider.h
ROOT_TObject
ROOT_Object

./math/mathcore/inc/Math/IntegratorMultiDim.h
ROOT_Math_AllIntegrationTypes
ROOT_Math_IntegrationTypes

./math/quadp/inc/TQpProbDens.h
ROOT_TQpVar
ROOT_TQpVars

./math/quadp/inc/TQpProbSparse.h
ROOT_TQpVar
ROOT_TQpVars

./math/genvector/inc/Math/GenVector/PositionVector2D.h
ROOT_Math_DisplacementVector2D
ROOT_Math_GenVector_DisplacementVector2Dfwd

./math/smatrix/inc/Math/SVector.h
ROOT_Math_MConfig
ROOT_Math_MnConfig

./math/smatrix/inc/Math/SMatrix.h
ROOT_Math_MConfig
ROOT_Math_MnConfig

./math/mathmore/inc/Math/RootFinderAlgorithms.h
ROOT_Math_GSL_RootFinderDeriv
ROOT_Math_GSLRootFinderDeriv

./bindings/r/inc/TRInterface.h
ROOT_R_TRFunctionExport
ROOT_R_TFunctionExport

./bindings/r/inc/TRInterface.h
ROOT_R_TRFunctionImport
ROOT_R_TFunctionImport

./geom/geom/inc/TGeoNavigator.h
ROOT_TGeoCache
ROOT_TGeoNodeCache

./net/netx/inc/TXNetSystem.h
ROOT_TNetFile
ROOT_TNetSystem

./tmva/tmva/inc/TMVA/ModulekNN.h
ROOT_TRandom3
ROOT_TRandom

./tmva/tmva/src/ClassInfo.cxx
ROOT_TMatrixD
ROOT_TMatrix

./hist/histpainter/inc/TGraph2DPainter.h
ROOT_TObject
ROOT_Object

./hist/hist/inc/TAxisModLab.h
ROOT_TObject
ROOT_TAttText

./hist/hist/inc/v5/TF1Data.h
ROOT_TFormula
ROOT_v5_TFormula

./roofit/roostats/inc/RooStats/ConfidenceBelt.h
ROO_ABS_DATA
ROO_TREE_DATA

./roofit/roostats/inc/RooStats/MCMCIntervalPlot.h
ROO_NDKEYS_PDF
ROO_KEYS_PDF

./roofit/roostats/inc/RooStats/PointSetInterval.h
ROO_ABS_DATA
ROO_TREE_DATA

./roofit/roostats/src/MCMCInterval.cxx
ROO_NDKEYS_PDF
ROO_KEYS_PDF

./roofit/roostats/src/ProposalHelper.cxx
ROO_NDKEYS_PDF
ROO_KEYS_PDF

./graf2d/graf/inc/TCandle.h
ROOT_TAttMarker
ROOT_TAttMarket

./graf2d/ios/inc/IOSPainter.h
ROOT_IOSGraphicUtils
ROOT_GraphicUtils

./graf2d/ios/inc/IOSPad.h
ROOT_TList
ROOT_TLine

./graf2d/ios/inc/IOSPad.h
ROOT_TextOperations
ROOT_IOSTextOperations

./graf2d/ios/inc/IOSTextOperations.h
ROOT_ResourceManagement
ROOT_IOSResourceManagement

./graf2d/gpad/inc/TClassTree.h
ROOT_TNamed
ROOT_TTnamed

./core/base/src/TListOfTypes.h
ROOT_THashTable
ROOT_THastTable

./core/meta/inc/TListOfFunctionTemplates.h
ROOT_THashList
ROOT_THastList

./core/meta/inc/TListOfFunctionTemplates.h
ROOT_THashTable
ROOT_THastTable

./core/meta/inc/TListOfDataMembers.h
ROOT_THashList
ROOT_THastList

./core/meta/inc/TListOfFunctions.h
ROOT_THashList
ROOT_THastList

./core/meta/inc/TListOfFunctions.h
ROOT_THashTable
ROOT_THastTable

./core/meta/inc/TListOfEnums.h
ROOT_THashList
ROOT_THastList

Found typos (really low chance of false positives)

Probably correct typo corrections:110

./graf3d/gl/inc/TGLPadPainter.h:
ROOT_TGLFontManager
ROOT_TGLFontmanager

./tree/treeplayer/inc/TTreeGeneratorBase.h:
ROOT_TList
ROOT_Tlist

./math/mathcore/inc/Fit/FitResult.h:
ROOT_Math_IFunctionfwd
ROOT_Fit_IFunctionfwd

./math/mathcore/inc/Fit/FitResult.h:
ROOT_Math_IParamFunctionfwd
ROOT_Fit_IParamFunctionfwd

./math/genvector/inc/Math/GenVector/PxPyPzM4D.h:
ROOT_Math_PxPyPzE4D
ROOT_Math_GenVector_PxPyPzE4D

./math/genvector/inc/Math/GenVector/PxPyPzM4D.h:
ROOT_Math_PtEtaPhiM4D
ROOT_Math_GenVector_PtEtaPhiM4D

./math/genvector/inc/Math/GenVector/Transform3D.h:
ROOT_Math_DisplacementVector3D
ROOT_Math_GenVector_DisplacementVector3D

./math/genvector/inc/Math/GenVector/Transform3D.h:
ROOT_Math_PositionVector3D
ROOT_Math_GenVector_PositionVector3D

./math/genvector/inc/Math/GenVector/Transform3D.h:
ROOT_Math_Rotation3D
ROOT_Math_GenVector_Rotation3D

./math/genvector/inc/Math/GenVector/Transform3D.h:
ROOT_Math_Translation3D
ROOT_Math_GenVector_Translation3D

./math/genvector/inc/Math/GenVector/PxPyPzE4D.h:
ROOT_Math_PtEtaPhiE4D
ROOT_Math_GenVector_PtEtaPhiE4D

./math/genvector/inc/Math/GenVector/PxPyPzE4D.h:
ROOT_Math_PtEtaPhiM4D
ROOT_Math_GenVector_PtEtaPhiM4D

./math/genvector/inc/Math/GenVector/Cartesian3D.h:
ROOT_Math_CylindricalEta3D
ROOT_Math_GenVector_CylindricalEta3D

./math/genvector/inc/Math/GenVector/Cartesian3D.h:
ROOT_Math_Polar3D
ROOT_Math_GenVector_Polar3D

./math/genvector/inc/Math/GenVector/PtEtaPhiE4D.h:
ROOT_Math_PxPyPzE4D
ROOT_Math_GenVector_PxPyPzE4D

./math/genvector/inc/Math/GenVector/PtEtaPhiE4D.h:
ROOT_Math_PtEtaPhiM4D
ROOT_Math_GenVector_PtEtaPhiM4D

./math/genvector/inc/Math/GenVector/Translation3D.h:
ROOT_Math_DisplacementVector3D
ROOT_Math_GenVector_DisplacementVector3D

./math/genvector/inc/Math/GenVector/RotationZYX.h:
ROOT_Math_Rotation3D
ROOT_Math_GenVector_Rotation3D

./math/genvector/inc/Math/GenVector/RotationZYX.h:
ROOT_Math_DisplacementVector3D
ROOT_Math_GenVector_DisplacementVector3D

./math/genvector/inc/Math/GenVector/RotationZYX.h:
ROOT_Math_PositionVector3D
ROOT_Math_GenVector_PositionVector3D

./math/genvector/inc/Math/GenVector/RotationZYX.h:
ROOT_Math_LorentzVector
ROOT_Math_GenVector_LorentzVector

./math/genvector/inc/Math/GenVector/Polar3D.h:
ROOT_Math_Cartesian3D
ROOT_Math_GenVector_Cartesian3D

./math/genvector/inc/Math/GenVector/Polar3D.h:
ROOT_Math_CylindricalEta3D
ROOT_Math_GenVector_CylindricalEta3D

./math/genvector/inc/Math/GenVector/Cylindrical3D.h:
ROOT_Math_Cartesian3D
ROOT_Math_GenVector_Cartesian3D

./math/genvector/inc/Math/GenVector/Cylindrical3D.h:
ROOT_Math_CylindricalEta3D
ROOT_Math_GenVector_CylindricalEta3D

./math/genvector/inc/Math/GenVector/Cylindrical3D.h:
ROOT_Math_Polar3D
ROOT_Math_GenVector_Polar3D

./math/genvector/inc/Math/GenVector/CylindricalEta3D.h:
ROOT_Math_Cartesian3D
ROOT_Math_GenVector_Cartesian3D

./math/genvector/inc/Math/GenVector/CylindricalEta3D.h:
ROOT_Math_Polar3D
ROOT_Math_GenVector_Polar3D

./math/genvector/inc/Math/GenVector/PositionVector3D.h:
ROOT_Math_Cartesian3D
ROOT_Math_GenVector_Cartesian3D

./math/genvector/inc/Math/GenVector/DisplacementVector3D.h:
ROOT_Math_Cartesian3D
ROOT_Math_GenVector_Cartesian3D

./math/genvector/inc/Math/GenVector/PtEtaPhiM4D.h:
ROOT_Math_PxPyPzE4D
ROOT_Math_GenVector_PxPyPzE4D

./math/genvector/inc/Math/GenVector/Polar2D.h:
ROOT_Math_Cartesian2D
ROOT_Math_GenVector_Cartesian2D

./math/genvector/inc/Math/GenVector/DisplacementVector2D.h:
ROOT_Math_Cartesian2D
ROOT_Math_GenVector_Cartesian2D

./math/genvector/inc/Math/GenVector/LorentzVector.h:
ROOT_Math_PxPyPzE4D
ROOT_Math_GenVector_PxPyPzE4D

./math/genvector/inc/Math/GenVector/LorentzVector.h:
ROOT_Math_DisplacementVector3D
ROOT_Math_GenVector_DisplacementVector3D

./math/genvector/inc/Math/GenVector/Cartesian2D.h:
ROOT_Math_Polar2D
ROOT_Math_GenVector_Polar2D

./math/smatrix/inc/Math/MatrixRepresentationsStatic.h:
Root_Math_StaticCheck
ROOT_Math_StaticCheck

./math/smatrix/inc/Math/SVector.icc:
Root_Math_StaticCheck
ROOT_Math_StaticCheck

./math/smatrix/inc/Math/SMatrix.icc:
Root_Math_StaticCheck
ROOT_Math_StaticCheck

./net/alien/inc/TAlienDirectory.h:
ROOT_TList
ROOT_Tlist

./net/rpdutils/res/rpdp.h:
ROOT_Varargs
ROOT_VarArgs

./tmva/tmva/inc/TMVA/CCTreeWrapper.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/TNeuron.h:
ROOT_TSynapse
ROOT_TMVA_TSynapse

./tmva/tmva/inc/TMVA/RuleFitParams.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/MethodDT.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/ResultsRegression.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/TNeuronInputAbs.h:
ROOT_TNeuron
ROOT_TMVA_TNeuron

./tmva/tmva/inc/TMVA/MethodMLP.h:
ROOT_TNeuron
ROOT_TMVA_TNeuron

./tmva/tmva/inc/TMVA/DataLoader.h:
ROOT_Math_Factory
ROOT_TMVA_Factory

./tmva/tmva/inc/TMVA/MethodCuts.h:
ROOT_TMVA_IFitterTarget
ROOT_IFitterTarget

./tmva/tmva/inc/TMVA/MethodANNBase.h:
ROOT_TNeuron
ROOT_TMVA_TNeuron

./tmva/tmva/inc/TMVA/HyperParameterOptimisation.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/HyperParameterOptimisation.h:
ROOT_Math_Factory
ROOT_TMVA_Factory

./tmva/tmva/inc/TMVA/CCPruner.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/MethodBDT.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/VariableImportance.h:
ROOT_Math_Factory
ROOT_TMVA_Factory

./tmva/tmva/inc/TMVA/RuleEnsemble.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/LogInterval.h:
ROOT_TMVA_Interval
TMVA_Interval

./tmva/tmva/inc/TMVA/DataSetInfo.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/CostComplexityPruneTool.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/MethodBase.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/RuleCut.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/RuleFit.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/ResultsMulticlass.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/ResultsMulticlass.h:
ROOT_TMVA_IFitterTarget
ROOT_IFitterTarget

./tmva/tmva/inc/TMVA/VariableTransformBase.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/DataSetFactory.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/TNeuronInputSqSum.h:
ROOT_TNeuron
ROOT_TMVA_TNeuron

./tmva/tmva/inc/TMVA/Rule.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/PDEFoamDensityBase.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/CrossValidation.h:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/inc/TMVA/CrossValidation.h:
ROOT_Math_Factory
ROOT_TMVA_Factory

./tmva/tmva/inc/TMVA/OptimizeConfigParameters.h:
ROOT_TMVA_IFitterTarget
ROOT_IFitterTarget

./tmva/tmva/inc/TMVA/TNeuronInputSum.h:
ROOT_TNeuron
ROOT_TMVA_TNeuron

./tmva/tmva/src/TSynapse.cxx:
ROOT_TNeuron
ROOT_TMVA_TNeuron

./tmva/tmva/src/DataSetFactory.cxx:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/src/BinarySearchTree.cxx:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/src/Tools.cxx:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/src/DataSetInfo.cxx:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/src/ROCCalc.cxx:
ROOT_Event
ROOT_TMVA_Event

./tmva/tmva/src/DataSet.cxx:
ROOT_Event
ROOT_TMVA_Event

./hist/hist/inc/TFitResult.h:
ROOT_Fit_FitResult
ROOT_FIT_FitResult

./roofit/roostats/inc/RooStats/SimpleInterval.h:
ROOSTATS_ConfInterval
RooStats_ConfInterval

./roofit/roostats/inc/RooStats/MetropolisHastings.h:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/inc/RooStats/ConfidenceBelt.h:
ROOSTATS_ConfInterval
RooStats_ConfInterval

./roofit/roostats/inc/RooStats/HypoTestInverterResult.h:
RooStats_SimpleInterval
ROOSTATS_SimpleInterval

./roofit/roostats/inc/RooStats/BayesianCalculator.h:
RooStats_SimpleInterval
ROOSTATS_SimpleInterval

./roofit/roostats/inc/RooStats/LikelihoodInterval.h:
ROOSTATS_ConfInterval
RooStats_ConfInterval

./roofit/roostats/inc/RooStats/PointSetInterval.h:
ROOSTATS_ConfInterval
RooStats_ConfInterval

./roofit/roostats/inc/RooStats/ProfileLikelihoodTestStat.h:
ROOT_Math_MinimizerOptions
ROOTT_Math_MinimizerOptions

./roofit/roostats/src/PdfProposal.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/NumberCountingPdfFactory.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/ModelConfig.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/MetropolisHastings.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/NumberCountingUtils.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/BernsteinCorrection.cxx:
ROOSTATS_BernsteinCorrection
RooStats_BernsteinCorrection

./roofit/roostats/src/UniformProposal.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/MCMCInterval.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/NeymanConstruction.cxx:
ROOSTATS_NeymanConstruction
RooStats_NeymanConstruction

./roofit/roostats/src/NeymanConstruction.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/MarkovChain.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/ProposalHelper.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/HypoTestResult.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/ProfileLikelihoodCalculator.cxx:
ROOSTATS_ProfileLikelihoodCalculator
RooStats_ProfileLikelihoodCalculator

./roofit/roostats/src/ProfileLikelihoodCalculator.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/MCMCCalculator.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./roofit/roostats/src/FeldmanCousins.cxx:
ROOSTATS_FeldmanCousins
RooStats_FeldmanCousins

./roofit/roostats/src/FeldmanCousins.cxx:
ROOSTATS_RooStatsUtils
RooStats_RooStatsUtils

./core/base/inc/TFileInfo.h:
ROOT_TUrl
ROOT_Turl

./core/rint/inc/TTabCom.h:
ROOT_TRegexp
ROOT_TRegExp

includes the script didn't check

./proof/proofx/inc/TXSocket.h: Coulnd't find file for header: XPtypes.hh
./proof/proofd/inc/XrdProofConn.h: Coulnd't find file for header: XrdOucString.hh
./build/rmkdepend/def.h: Coulnd't find file for header: string.h
./bindings/r/inc/TRInternalFunction.h: Coulnd't find file for header: Rcpp.h
./bindings/r/inc/TRFunctionImport.h: Coulnd't find file for header: Rcpp.h
./net/netxng/inc/TNetXNGFile.h: Coulnd't find file for header: XrdClFileSystem.hh
./net/auth/src/TAuthenticate.cxx: Coulnd't find file for header: stat.h
./net/http/civetweb/md5.inl: Coulnd't find file for header: string.h
./tmva/tmva/inc/TMVA/Timer.h: Coulnd't find file for header: time.h
./tmva/tmva/inc/TMVA/BinarySearchTree.h: Coulnd't find file for header: time.h
./graf2d/win32gdk/gdk/src/glib/gwin32.c: Coulnd't find file for header: direct.h
./graf2d/win32gdk/gdk/src/gdk/gdk.c: Couldn't find a header guard for ./graf2d/win32gdk/gdk/src/gdk/gdkkeysyms.h