Till Sauerwein Tillsa
Tillsa
/ run_dual.sh
Last active
April 9, 2024 10:05
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| main(){ | |
| create_analysis_folder | |
| download_staph_genome | |
| download_staph_annotation | |
| download_human_genome | |
| extract_chromosome_20_from_genome | |
| remove_entire_human_genome | |
| get_human_annotation | |
| extract_chromosome_20_from_annotation | |
| remove_entire_annotation |
Tillsa
/ run_reademption_tutorial.sh
Created
June 22, 2020 14:30
A bash script to run READemptions example analysis
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| main(){ | |
| readonly READEMPTION=/home/till/Documents/READemption_developing/0.6.0/READemption/bin/reademption | |
| readonly READEMPTION_ANALYSIS_FOLDER=READemption_analysis | |
| create_project | |
| store_environment_variable | |
| download_fasta | |
| modify_fasta_header | |
| download_annotation | |
| download_reads |
Tillsa
/ replace_headers_in_fasta_improved_version.ipynb
Created
March 19, 2019 15:05
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