gistfile1.txt

#!/bin/sh
#THIS REQUIRES THE FOLLOWING LINE TO BE CONFIGURED IN /etc/sudoers
#some.account.name  ALL = NOPASSWD: /sbin/service crond *
if [ `whoami` == some.account.name ]; then
    export GALAXY_RUN_ALL=1
        sudo /sbin/service crond stop
        while pgrep galaxy-dropbox > /dev/null; do sleep 1 && echo "waiting for galaxy-dropbox to finish"; done
        /group/galaxy/galaxy-dist/run.sh --stop-daemon && sleep 15
        cd /group/galaxy/galaxy-dist; sh run.sh --daemon --log-file /group/galaxy/log/galaxy.log
        while ! echo exit | nc localhost 8080; do sleep 1 && echo "waiting for galaxy to start"; done
        echo "To watch Galaxy start Type:"
        echo "tail -f /group/galaxy/log/galaxy.log"
        sudo /sbin/service crond start
    else
  echo "Please run this as the galaxy user."
fi;