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"""Converter script for storing trackmate outputs as .slp files | |
Usage: | |
`python trackmate2slp.py -l [PATH_TO_LABELS_1] [PATH_TO_LABELS_2] [PATH_TO_LABELS_N] -v [PATH_TO_TIF_1] [PATH_TO_TIF_2] [PATH_TO_TIF_3] -o [OUTDIR] -n` | |
""" | |
import pandas as pd | |
import numpy as np | |
import sleap | |
from skimage.io import imread | |
from pathlib import Path |
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''' | |
Python implementation of ABR thresholding algorithm from Suthakar and Liberman, Hearing Research, (2019). | |
''' | |
import numpy as np | |
import scipy as sp | |
import pandas as pd | |
import seaborn as sns | |
from scipy import signal | |
from scipy.optimize import curve_fit |