Created
August 14, 2017 19:18
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Joining GWAS data tables
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| alspac <- alspac %>% | |
| mutate(allele_key = if_else( | |
| A1 < A2, | |
| paste0(A1, A2), | |
| paste0(A2, A1) | |
| )) | |
| s4s <- s4s %>% | |
| mutate(allele_key = if_else( | |
| alleleA < alleleB, | |
| paste0(alleleA, alleleB), | |
| paste0(alleleB, alleleA) | |
| )) | |
| s4s.only <- | |
| anti_join(s4s, | |
| alspac, | |
| by = c( | |
| chromosome = "chr", | |
| position = "position", | |
| allele_key = "allele_key" | |
| )) |
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