I hereby claim:
- I am aaronwolen on github.
- I am aaronwolen (https://keybase.io/aaronwolen) on keybase.
- I have a public key ASDImqf4QGQ1fLEAtxsn8eS4coyrtRv76ah_gmzb6_BMZwo
To claim this, I am signing this object:
while read line; do | |
mv -v "$line" "${line// - /}" | |
done < <(find . -name '* .png') |
#!/usr/bin/env bash | |
# format | |
sudo mkfs -t ext4 /dev/nvme1n1 | |
# mount ebs volumne | |
sudo mkdir -p /mnt/data | |
sudo mount /dev/nvme1n1 /mnt/data | |
# fix permissions |
# genome reference | |
fai_url := s3://broad-references/hg38/v0/Homo_sapiens_assembly38.fasta.fai | |
fai_file := $(notdir $(fai_url)) | |
# original clinvar vcf | |
vcf_url := ftp.ncbi.nlm.nih.gov/pub/clinvar/vcf_GRCh38/clinvar_20210710.vcf.gz | |
raw_vcf := $(notdir $(vcf_url)) | |
# modified vcf file | |
mod_vcf := $(raw_vcf:%.vcf.gz=%_modified.vcf.gz) |
library(osfr) | |
library(purrr) | |
library(tibble) | |
# functions --------------------------------------------------------------- | |
# id: project GUID | |
.osf_list_wikis <- function(id) { | |
api_path <- sprintf("nodes/%s/wikis", id) |
#!/usr/bin/env bash | |
# variables | |
############# | |
tilevcf="dist/bin/tiledbvcf" | |
tmpdir="/mnt/data/tmp" | |
samplefile="$tmpdir/samples.txt" | |
output_dir="data" | |
export_dir="$output_dir/exports" |
- alias: Announce Door Open | |
trigger: | |
- platform: state | |
entity_id: | |
- binary_sensor.back_door | |
- binary_sensor.front_door | |
to: 'on' | |
for: | |
seconds: 30 |
../bootstrap --prefix=../dist | |
-- The C compiler identification is AppleClang 11.0.3.11030032 | |
-- The CXX compiler identification is AppleClang 11.0.3.11030032 | |
-- Check for working C compiler: /usr/bin/gcc | |
-- Check for working C compiler: /usr/bin/gcc - works | |
-- Detecting C compiler ABI info | |
-- Detecting C compiler ABI info - done | |
-- Detecting C compile features | |
-- Detecting C compile features - done | |
-- Check for working CXX compiler: /usr/bin/g++ |
{ | |
// See https://go.microsoft.com/fwlink/?LinkId=733558 | |
// for the documentation about the tasks.json format | |
"version": "2.0.0", | |
"tasks": [ | |
{ | |
"label": "setup", | |
"type": "shell", | |
"options": { | |
"cwd": "${workspaceFolder}/libtiledbvcf" |
I hereby claim:
To claim this, I am signing this object: