abargnesi

#!/usr/bin/env bash

API_URL="https://api.instagram.com/v1/tags/foodporn/media/recent"
TOKEN="PUT YOUR TOKEN HERE"

request_next_url() {
    URL="$1"

	  #http2 connections seem to be immune to connection issues.
    #echo $(curl --http2 --verbose "$URL" 2>> trace-http2.log | jq .pagination.next_url | tr -d '"')

abargnesi

{
    "created_at": "Mon Sep 19 19:36:50 +0000 2016",
    "id": 777954621826342912,
    "id_str": "777954621826342912",
    "text": "@SobatRizalRamli @rajomalano @republikaonline @antaranews @BeritasatuTV @PKSejahtera @Gerindra @PDemokrat… https://t.co/whQg3y7tGe",
    "source": "<a href=\"https://about.twitter.com/products/tweetdeck\" rel=\"nofollow\">TweetDeck</a>",
    "truncated": true,
    "in_reply_to_status_id": 777953136774225921,
    "in_reply_to_status_id_str": "777953136774225921",
    "in_reply_to_user_id": 767731724201529347,

abargnesi

function crawl_for_urls() {
    if [ $# != 1 ]; then
        echo "usage: crawl_for_urls URL" >2
        exit 1
    fi  

    wget --spider --force-html -r "$1" 2>&1 | \ 
        grep '^--' | \ 
        awk '{ print \$3 }' | \ 
        grep -v '\.\(css\|js\|png\|gif\|jpg\)$'

abargnesi

# Configuration template for OpenBEL API

# BEL configuration.
bel:
  # The BEL version supported by this OpenBEL API instance.
  # Allowed values:
  #   1.0
  #     (BEL version 1.0 specification)
  #   2.0
  #     (BEL version 2.0 specification)

abargnesi

require 'benchmark/ips'
require 'set'

numbers = (0..10_000_000).to_a
hash    = Hash[numbers.map { |n| [n, true] }]
set     = Set.new(numbers)

Benchmark.ips do |x|
  x.warmup = 5
  x.time   = 30

abargnesi

diff --git a/spec/unit/language/version1/syntax/v1_syntax_spec.rb b/spec/unit/language/version1/syntax/v1_syntax_spec.rb
index 513d716..ad590c1 100644
--- a/spec/unit/language/version1/syntax/v1_syntax_spec.rb
+++ b/spec/unit/language/version1/syntax/v1_syntax_spec.rb
@@ -33,4 +33,18 @@ describe 'parsing' do
       end
     end
   end
+
+  context 'partial' do

abargnesi

diff --git a/lib/bel_parser/parsers/ast/node.rb b/lib/bel_parser/parsers/ast/node.rb
index 18dfb81..fabd143 100644
--- a/lib/bel_parser/parsers/ast/node.rb
+++ b/lib/bel_parser/parsers/ast/node.rb
@@ -823,83 +823,83 @@ module BELParser
       #
       # @see https://en.wikipedia.org/wiki/S-expression S-expression
       module Sexp
-        def nested_statement(*children)
+        def nested_statement(*children, **properties)

abargnesi

@prefix rdf:  <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix belv: <http://www.openbel.org/vocabulary/> .

belv:NamespaceConceptScheme rdfs:subClassOf skos:ConceptScheme .

<http://identifiers.org/ncbigene> rdf:type skos:ConceptScheme .
<http://identifiers.org/hgnc>     rdf:type skos:ConceptScheme .

abargnesi

[
    {
        "evidence": {
            "bel_statement": "a(CHEBI:\"phorbol 13-acetate 12-myristate\") -> kin(p(HGNC:MAPK1))",
            "citation": {
                "type": "PubMed",
                "name": "J Biol Chem. 1997 Jul 4;272(27):16917-23.",
                "id": null,
                "date": null,
                "authors": null,

abargnesi

#!/usr/bin/env python2

# read program arguments
import sys
program_arguments = sys.argv[1:]
if len(program_arguments) != 3:
    sys.stderr.write(
        "usage: replace_line.py [FILE] [MATCH] [REPLACE]\n"
    )
file_name, match_line, replace_line = program_arguments