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open-mpi on 4.18.5-arch1-1-ARCH - Homebrew build logs
Homebrew build logs for open-mpi on 4.18.5-arch1-1-ARCH
Build date: 2018-10-05 07:52:32
HOMEBREW_VERSION: 1.7.6
ORIGIN: https://github.com/Linuxbrew/brew
HEAD: eff380ed4278274191000f0d15d1f87b5d57d036
Last commit: 10 days ago
Core tap ORIGIN: https://github.com/Linuxbrew/homebrew-core
Core tap HEAD: b53bdd140a36959ae7fdb198e21723be22b3bf6e
Core tap last commit: 15 hours ago
HOMEBREW_PREFIX: /home/abel/.linuxbrew
HOMEBREW_REPOSITORY: /home/abel/.linuxbrew/Homebrew
HOMEBREW_CELLAR: /home/abel/.linuxbrew/Cellar
HOMEBREW_CACHE: /home/abel/.cache/Homebrew
HOMEBREW_GIT: git
HOMEBREW_GITHUB_API_TOKEN: set
CPU: quad-core 64-bit kabylake
Homebrew Ruby: 2.5.1 => /usr/bin/ruby
Clang: N/A
Git: 2.19.0 => /bin/git
Curl: 7.61.1 => /usr/bin/curl
Java: N/A
Kernel: Linux 4.18.5-arch1-1-ARCH x86_64 GNU/Linux
OS: N/A
Host glibc: 2.28
/usr/bin/gcc: 8.2.1
glibc: N/A
gcc: 5.5.0_4
xorg: N/A
Please note that these warnings are just used to help the Homebrew maintainers
with debugging if you file an issue. If everything you use Homebrew for is
working fine: please don't worry or file an issue; just ignore this. Thanks!
Warning: python is symlinked to python3
This will confuse build scripts and in general lead to subtle breakage.
2018-10-05 07:49:03 -0300
./configure
--prefix=/home/abel/.linuxbrew/Cellar/open-mpi/3.1.2
--disable-dependency-tracking
--disable-silent-rules
--enable-ipv6
--with-libevent=/home/abel/.linuxbrew/opt/libevent
--with-sge
checking for perl... perl
============================================================================
== Configuring Open MPI
============================================================================
*** Startup tests
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking target system type... x86_64-unknown-linux-gnu
checking for gcc... gcc-5
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc-5 accepts -g... yes
checking for gcc-5 option to accept ISO C89... none needed
checking whether gcc-5 understands -c and -o together... yes
checking how to run the C preprocessor... gcc-5 -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking whether make supports nested variables... yes
checking whether UID '1000' is supported by ustar format... yes
checking whether GID '1000' is supported by ustar format... yes
checking how to create a ustar tar archive... gnutar
checking dependency style of gcc-5... none
checking whether make supports nested variables... (cached) yes
*** Checking versions
checking for repo version... v3.1.2
checking Open MPI version... 3.1.2
checking Open MPI release date... Aug 22, 2018
checking Open MPI repository version... v3.1.2
checking for repo version... v3.1.2
checking Open MPI Run-Time Environment version... 3.1.2
checking Open MPI Run-Time Environment release date... Aug 22, 2018
checking Open MPI Run-Time Environment repository version... v3.1.2
checking for repo version... v3.1.2
checking Open SHMEM version... 3.1.2
checking Open SHMEM release date... Aug 22, 2018
checking Open SHMEM repository version... v3.1.2
checking for repo version... v3.1.2
checking Open Portable Access Layer version... 3.1.2
checking Open Portable Access Layer release date... Aug 22, 2018
checking Open Portable Access Layer repository version... v3.1.2
checking for bootstrap Autoconf version... 2.69
checking for bootstrap Automake version... 1.15
checking for boostrap Libtool version... 2.4.6
*** Initialization, setup
configure: builddir: /tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2
configure: srcdir: /tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2
installing to directory "/home/abel/.linuxbrew/Cellar/open-mpi/3.1.2"
*** OPAL Configuration options
checking if want to run code coverage... no
checking if want to compile with branch probabilities... no
checking if want to debug memory usage... no
checking if want to profile memory usage... no
checking if want developer-level compiler pickyness... no
checking if want developer-level debugging code... no
checking if want to developer-level timing framework... no
checking if want to install project-internal header files... no
checking if want pretty-print stacktrace... yes
checking if want pty support... yes
checking if want weak symbol support... yes
checking if want dlopen support... yes
checking for default value of mca_base_component_show_load_errors... enabled by default
checking if want heterogeneous support... no
checking if word-sized integers must be word-size aligned... no
checking if want IPv6 support... yes
checking if want package/brand string... Open MPI abel@abel Distribution
checking if want ident string... 3.1.2
checking if want to use an alternative checksum algo for messages... no
checking maximum length of processor name... 256
checking maximum length of error string... 256
checking maximum length of object name... 64
checking maximum length of info key... 36
checking maximum length of info val... 256
checking maximum length of port name... 1024
checking maximum length of datarep string... 128
checking if want getpwuid support... yes
checking for zlib in... (default search paths)
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
looking for library without search path
checking for library containing deflate... -lz
checking if libz requires libnl v1 or v3...
checking will zlib support be built... yes
checking __NetBSD__... no
checking __FreeBSD__... no
checking __OpenBSD__... no
checking __DragonFly__... no
checking __386BSD__... no
checking __bsdi__... no
checking __APPLE__... no
checking __linux__... yes
checking __sun__... no
checking __sun... no
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking netinet/tcp.h usability... yes
checking netinet/tcp.h presence... yes
checking for netinet/tcp.h... yes
checking for struct sockaddr_in... yes
checking if --with-cuda is set... not set (--with-cuda=)
checking whether CU_POINTER_ATTRIBUTE_SYNC_MEMOPS is declared... no
checking whether cuPointerGetAttributes is declared... no
checking if have cuda support... no
checking if user requested external PMIx support()... no
*** ORTE Configuration options
checking if want orterun "--prefix" behavior to be enabled by default... no
*** OMPI Configuration options
checking if want compile-time warnings inside of mpi.h... yes
checking if want sparse process groups... no
checking if want peruse support... no
checking if want Fortran MPI bindings... (try)
checking if want C++ bindings... no
checking if want MPI::SEEK_SET support... yes
checking if want run-time MPI parameter checking... runtime
*** OSHMEM Configuration options
checking if want oshmem... yes
checking if want SGI/Quadrics compatibility mode... yes
checking if want OSHMEM API parameter checking... always
checking for on_exit... yes
checking if want pshmem... yes
checking if want to build OSHMEM fortran bindings... yes
checking if want custom libmpi(_FOO) name... mpi
checking if want wrapper compiler rpath support... yes
checking if want wrapper compiler runpath support... yes
============================================================================
== Compiler and preprocessor tests
============================================================================
*** C compiler and preprocessor
checking for gcc... (cached) gcc-5
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc-5 accepts -g... (cached) yes
checking for gcc-5 option to accept ISO C89... (cached) none needed
checking whether gcc-5 understands -c and -o together... (cached) yes
checking for gcc-5 option to accept ISO C99... none needed
checking for the C compiler vendor... gnu
checking for ANSI C header files... (cached) yes
checking if gcc-5 supports -finline-functions... yes
checking if gcc-5 supports -fno-strict-aliasing... yes
configure: WARNING: -fno-strict-aliasing has been added to CFLAGS
checking if gcc-5 supports __builtin_expect... yes
checking if gcc-5 supports __builtin_prefetch... yes
checking if gcc-5 supports __builtin_clz... yes
checking for C optimization flags... -O3 -DNDEBUG -finline-functions -fno-strict-aliasing
checking for Interix environment... no
checking for C ident string support... #ident
checking for int8_t... yes
checking for uint8_t... yes
checking for int16_t... yes
checking for uint16_t... yes
checking for int32_t... yes
checking for uint32_t... yes
checking for int64_t... yes
checking for uint64_t... yes
checking for int128_t... no
checking for __int128... yes
checking for uint128_t... no
checking for long long... yes
checking for __float128... yes
checking for long double... yes
checking complex.h usability... yes
checking complex.h presence... yes
checking for complex.h... yes
checking for float _Complex... yes
checking for double _Complex... yes
checking for long double _Complex... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking for mode_t... yes
checking for ssize_t... yes
checking for ptrdiff_t... yes
checking size of _Bool... 1
checking size of char... 1
checking size of short... 2
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of float... 4
checking size of double... 8
checking size of long double... 16
checking size of __float128... 16
checking size of float _Complex... 8
checking size of double _Complex... 16
checking size of long double _Complex... 32
checking size of void *... 8
checking size of size_t... 8
checking size of ssize_t... 8
checking size of ptrdiff_t... 8
checking size of wchar_t... 4
checking size of pid_t... 4
checking alignment of bool... 1
checking alignment of int8_t... 1
checking alignment of int16_t... 2
checking alignment of int32_t... 4
checking alignment of int64_t... 8
checking alignment of char... 1
checking alignment of short... 2
checking alignment of wchar_t... 4
checking alignment of int... 4
checking alignment of long... 8
checking alignment of long long... 8
checking alignment of float... 4
checking alignment of double... 8
checking alignment of long double... 16
checking alignment of __float128... 16
checking alignment of float _Complex... 4
checking alignment of double _Complex... 8
checking alignment of long double _Complex... 16
checking alignment of void *... 8
checking alignment of size_t... 8
checking for weak symbol support... yes
checking for macro weak symbol support... yes
checking for functional offsetof macro... yes
*** C++ compiler and preprocessor
checking whether we are using the GNU C++ compiler... yes
checking whether g++-5 accepts -g... yes
checking dependency style of g++-5... none
checking how to run the C++ preprocessor... g++-5 -E
checking for the C++ compiler vendor... gnu
checking if g++-5 supports -finline-functions... yes
configure: WARNING: -finline-functions has been added to CXXFLAGS
checking if C and C++ are link compatible... yes
checking for C++ optimization flags... -O3 -DNDEBUG -finline-functions
checking size of bool... 1
checking alignment of bool... (cached) 1
*** C++ compiler and preprocessor
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether g++-5 accepts -g... (cached) yes
checking dependency style of g++-5... (cached) none
checking how to run the C++ preprocessor... g++-5 -E
checking if C++ compiler works... yes
checking if g++-5 supports -finline-functions... yes
configure: WARNING: -finline-functions has been added to CXXFLAGS
checking if C and C++ are link compatible... (cached) yes
checking for C++ optimization flags... -O3 -DNDEBUG -finline-functions
checking size of bool... (cached) 1
checking alignment of bool... (cached) 1
checking if able to build the MPI C++ bindings... no
checking if want C++ exception handling... skipped
*** Compiler characteristics
checking for __attribute__... yes
checking for __attribute__(aligned)... yes
checking for __attribute__(always_inline)... yes
checking for __attribute__(cold)... yes
checking for __attribute__(const)... yes
checking for __attribute__(deprecated)... yes
checking for __attribute__(deprecated_argument)... yes
checking for __attribute__(format)... yes
checking for __attribute__(format_funcptr)... yes
checking for __attribute__(hot)... yes
checking for __attribute__(malloc)... yes
checking for __attribute__(may_alias)... yes
checking for __attribute__(no_instrument_function)... yes
checking for __attribute__(noinline)... yes
checking for __attribute__(nonnull)... yes
checking for __attribute__(noreturn)... yes
checking for __attribute__(noreturn_funcptr)... yes
checking for __attribute__(packed)... yes
checking for __attribute__(pure)... yes
checking for __attribute__(sentinel)... yes
checking for __attribute__(unused)... yes
checking for __attribute__(visibility)... yes
checking for __attribute__(warn_unused_result)... yes
checking for __attribute__(weak_alias)... yes
checking for __attribute__(destructor)... yes
checking for __attribute__(optnone)... no
checking for __attribute__(extension)... yes
checking for compiler familyid... 1
checking for compiler familyname... GNU
checking for compiler version... 328960
checking for compiler version_str... 5.5.0
*** Java compiler
checking OS X/macOS locations... not found
checking Linux locations... not found
checking Solaris locations... not found
checking Java support available... no
*** Java MPI bindings
checking if want Java bindings... no
*** OpenSHMEM profiling
checking if pshmem will be enabled... yes (weak symbols supported)
*** Assembler
checking dependency style of gcc-5... none
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking for fgrep... /usr/bin/grep -F
checking for __atomic builtin atomics... yes
checking for processor support of __atomic builtin atomic compare-and-swap on 128-bit values... no
checking for __atomic builtin atomic compare-and-swap on 128-bit values with -mcx16 flag... yes
checking if __int128 atomic compare-and-swap is always lock-free... yes
checking if .proc/endp is needed... no
checking directive for setting text section... .text
checking directive for exporting symbols... .globl
checking for objdump... objdump
checking if .note.GNU-stack is needed... yes
checking suffix for labels... :
checking prefix for global symbol labels...
checking prefix for lsym labels... .L
checking prefix for function in .type... @
checking if .size is needed... yes
checking if .align directive takes logarithmic value... no
checking if processor supports x86_64 16-byte compare-and-exchange... yes
checking if compiler correctly handles volatile 128bits... yes
checking for assembly architecture... X86_64
checking for builtin atomics... BUILTIN_GCC
*** Fortran compiler
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking whether ln -s works... yes
checking if Fortran compiler works... yes
checking for extra arguments to build a shared library... none needed
checking for gfortran warnings flags... none
checking for Fortran flag to compile .f files... none
checking for Fortran flag to compile .f90 files... none
checking to see if Fortran compilers need additional linker flags... none
checking external symbol convention... single underscore
checking if C and Fortran are link compatible... yes
checking to see if Fortran compiler likes the C++ exception flags... skipped (no C++ exceptions flags)
checking to see if mpifort compiler needs additional linker flags... none
checking if Fortran compiler supports CHARACTER... yes
checking size of Fortran CHARACTER... 1
checking for C type corresponding to CHARACTER... char
checking alignment of Fortran CHARACTER... 1
checking for corresponding KIND value of CHARACTER... C_SIGNED_CHAR
checking KIND value of Fortran C_SIGNED_CHAR... 1
checking if Fortran compiler supports LOGICAL... yes
checking size of Fortran LOGICAL... 4
checking for C type corresponding to LOGICAL... int
checking alignment of Fortran LOGICAL... 4
checking for corresponding KIND value of LOGICAL... C_INT
checking KIND value of Fortran C_INT... 4
checking if Fortran compiler supports LOGICAL*1... yes
checking size of Fortran LOGICAL*1... 1
checking for C type corresponding to LOGICAL*1... char
checking alignment of Fortran LOGICAL*1... 1
checking for corresponding KIND value of LOGICAL*1... C_SIGNED_CHAR
checking KIND value of Fortran C_SIGNED_CHAR... (cached) 1
checking if Fortran compiler supports LOGICAL*2... yes
checking size of Fortran LOGICAL*2... 2
checking for C type corresponding to LOGICAL*2... short
checking alignment of Fortran LOGICAL*2... 2
checking for corresponding KIND value of LOGICAL*2... C_SHORT
checking KIND value of Fortran C_SHORT... 2
checking if Fortran compiler supports LOGICAL*4... yes
checking size of Fortran LOGICAL*4... 4
checking for C type corresponding to LOGICAL*4... int
checking alignment of Fortran LOGICAL*4... 4
checking for corresponding KIND value of LOGICAL*4... C_INT
checking KIND value of Fortran C_INT... (cached) 4
checking if Fortran compiler supports LOGICAL*8... yes
checking size of Fortran LOGICAL*8... 8
checking for C type corresponding to LOGICAL*8... long long
checking alignment of Fortran LOGICAL*8... 8
checking for corresponding KIND value of LOGICAL*8... C_LONG_LONG
checking KIND value of Fortran C_LONG_LONG... 8
checking if Fortran compiler supports INTEGER... yes
checking size of Fortran INTEGER... 4
checking for C type corresponding to INTEGER... int
checking alignment of Fortran INTEGER... 4
checking for corresponding KIND value of INTEGER... C_INT
checking KIND value of Fortran C_INT... (cached) 4
checking if Fortran compiler supports INTEGER*1... yes
checking size of Fortran INTEGER*1... 1
checking for C type corresponding to INTEGER*1... char
checking alignment of Fortran INTEGER*1... 1
checking for corresponding KIND value of INTEGER*1... C_SIGNED_CHAR
checking KIND value of Fortran C_SIGNED_CHAR... (cached) 1
checking if Fortran compiler supports INTEGER*2... yes
checking size of Fortran INTEGER*2... 2
checking for C type corresponding to INTEGER*2... short
checking alignment of Fortran INTEGER*2... 2
checking for corresponding KIND value of INTEGER*2... C_SHORT
checking KIND value of Fortran C_SHORT... (cached) 2
checking if Fortran compiler supports INTEGER*4... yes
checking size of Fortran INTEGER*4... 4
checking for C type corresponding to INTEGER*4... int
checking alignment of Fortran INTEGER*4... 4
checking for corresponding KIND value of INTEGER*4... C_INT
checking KIND value of Fortran C_INT... (cached) 4
checking if Fortran compiler supports INTEGER*8... yes
checking size of Fortran INTEGER*8... 8
checking for C type corresponding to INTEGER*8... long long
checking alignment of Fortran INTEGER*8... 8
checking for corresponding KIND value of INTEGER*8... C_LONG_LONG
checking KIND value of Fortran C_LONG_LONG... (cached) 8
checking if Fortran compiler supports INTEGER*16... yes
checking size of Fortran INTEGER*16... 16
checking for C type corresponding to INTEGER*16... not found
configure: WARNING: *** Did not find corresponding C type
checking for corresponding KIND value of INTEGER*16... 0
checking KIND value of Fortran 0... 0
configure: WARNING: Compiler INTEGER*16 and mismatch; MPI datatype unsupported
checking if Fortran compiler supports REAL... yes
checking size of Fortran REAL... 4
checking for C type corresponding to REAL... float
checking alignment of Fortran REAL... 4
checking for corresponding KIND value of REAL... C_FLOAT
checking KIND value of Fortran C_FLOAT... 4
checking if Fortran compiler supports REAL*2... no
checking if Fortran compiler supports REAL*4... yes
checking size of Fortran REAL*4... 4
checking for C type corresponding to REAL*4... float
checking alignment of Fortran REAL*4... 4
checking for corresponding KIND value of REAL*4... C_FLOAT
checking KIND value of Fortran C_FLOAT... (cached) 4
checking if Fortran compiler supports REAL*8... yes
checking size of Fortran REAL*8... 8
checking for C type corresponding to REAL*8... double
checking alignment of Fortran REAL*8... 8
checking for corresponding KIND value of REAL*8... C_DOUBLE
checking KIND value of Fortran C_DOUBLE... 8
checking if Fortran compiler supports REAL*16... yes
checking size of Fortran REAL*16... 16
checking for C type corresponding to REAL*16... long double
checking alignment of Fortran REAL*16... 16
checking for corresponding KIND value of REAL*16... C_LONG_DOUBLE
checking KIND value of Fortran C_LONG_DOUBLE... 10
checking for C type matching bit representation of REAL*16... pending
checking if long double == REAL*16... no
checking if gnu compiler __float128 == REAL*16... works!
checking for C type matching bit representation of REAL*16... yes
checking if Fortran compiler supports DOUBLE PRECISION... yes
checking size of Fortran DOUBLE PRECISION... 8
checking for C type corresponding to DOUBLE PRECISION... double
checking alignment of Fortran DOUBLE PRECISION... 8
checking for corresponding KIND value of DOUBLE PRECISION... C_DOUBLE
checking KIND value of Fortran C_DOUBLE... (cached) 8
checking if Fortran compiler supports COMPLEX... yes
checking size of Fortran COMPLEX... 8
checking for C type corresponding to COMPLEX... float _Complex
checking alignment of Fortran COMPLEX... 4
checking for corresponding KIND value of COMPLEX... C_FLOAT_COMPLEX
checking KIND value of Fortran C_FLOAT_COMPLEX... 4
checking if Fortran compiler supports COMPLEX*4... no
checking if Fortran compiler supports COMPLEX*8... yes
checking size of Fortran COMPLEX*8... 8
checking for C type corresponding to COMPLEX*8... float _Complex
checking alignment of Fortran COMPLEX*8... 4
checking for corresponding KIND value of COMPLEX*8... C_FLOAT_COMPLEX
checking KIND value of Fortran C_FLOAT_COMPLEX... (cached) 4
checking if Fortran compiler supports COMPLEX*16... yes
checking size of Fortran COMPLEX*16... 16
checking for C type corresponding to COMPLEX*16... double _Complex
checking alignment of Fortran COMPLEX*16... 8
checking for corresponding KIND value of COMPLEX*16... C_DOUBLE_COMPLEX
checking KIND value of Fortran C_DOUBLE_COMPLEX... 8
checking if Fortran compiler supports COMPLEX*32... yes
checking size of Fortran COMPLEX*32... 32
checking for C type corresponding to COMPLEX*32... long double _Complex
checking alignment of Fortran COMPLEX*32... 16
checking for corresponding KIND value of COMPLEX*32... C_LONG_DOUBLE_COMPLEX
checking KIND value of Fortran C_LONG_DOUBLE_COMPLEX... 10
checking if Fortran compiler supports DOUBLE COMPLEX... yes
checking size of Fortran DOUBLE COMPLEX... 16
checking for C type corresponding to DOUBLE COMPLEX... double _Complex
checking alignment of Fortran DOUBLE COMPLEX... 8
checking for corresponding KIND value of DOUBLE COMPLEX... C_DOUBLE_COMPLEX
checking KIND value of Fortran C_DOUBLE_COMPLEX... (cached) 8
checking for max Fortran MPI handle index... 2147483647
checking Fortran value for .TRUE. logical type... 1
checking for correct handling of Fortran logical arrays... yes
checking max supported Fortran array rank... 7
checking for the value of MPI_STATUS_SIZE... 6 Fortran INTEGERs
checking KIND value of Fortran C_INT16_T... 2
checking KIND value of Fortran C_INT32_T... 4
checking KIND value of Fortran C_INT64_T... 8
checking if building Fortran mpif.h bindings... yes
checking if Fortran compiler supports INTERFACE... yes
checking if Fortran compiler supports ISO_FORTRAN_ENV... yes
checking if Fortran compiler supports STORAGE_SIZE for relevant types... yes
checking for Fortran compiler module include flag... -I
checking Fortran compiler ignore TKR syntax... not cached; checking variants
checking for Fortran compiler support of TYPE(*), DIMENSION(*)... no
checking for Fortran compiler support of !GCC$ ATTRIBUTES NO_ARG_CHECK... yes
checking Fortran compiler ignore TKR syntax... 1:type(*), dimension(*):!GCC$ ATTRIBUTES NO_ARG_CHECK ::
checking if Fortran compiler supports ISO_C_BINDING... yes
checking if building Fortran 'use mpi' bindings... yes
checking if Fortran compiler supports SUBROUTINE BIND(C)... yes
checking if Fortran compiler supports TYPE, BIND(C)... yes
checking if Fortran compiler supports TYPE(type), BIND(C, NAME="name")... yes
checking if Fortran compiler supports PROCEDURE... yes
checking if Fortran compiler supports USE...ONLY... yes
checking if Fortran compiler supports optional arguments... yes
checking if Fortran compiler supports C_FUNLOC/TS 29113... yes
checking if Fortran compiler supports PRIVATE... yes
checking if Fortran compiler supports PROTECTED... yes
checking if Fortran compiler supports ABSTRACT... yes
checking if Fortran compiler supports ASYNCHRONOUS... yes
checking size of Fortran type(test_mpi_handle)... 4
checking alignment of Fortran type(test_mpi_handle)... 4
checking Fortran compiler F08 assumed rank syntax... not cached; checking
checking for Fortran compiler support of TYPE(*), DIMENSION(..)... yes
checking Fortran compiler F08 assumed rank syntax... yes
checking which mpi_f08 implementation to build... "good" compiler, no array subsections
checking if building Fortran 'use mpi_f08' bindings... yes
============================================================================
== Header file tests
============================================================================
checking alloca.h usability... yes
checking alloca.h presence... yes
checking for alloca.h... yes
checking aio.h usability... yes
checking aio.h presence... yes
checking for aio.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dirent.h usability... yes
checking dirent.h presence... yes
checking for dirent.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking endian.h usability... yes
checking endian.h presence... yes
checking for endian.h... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking err.h usability... yes
checking err.h presence... yes
checking for err.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking libgen.h usability... yes
checking libgen.h presence... yes
checking for libgen.h... yes
checking libutil.h usability... no
checking libutil.h presence... no
checking for libutil.h... no
checking for memory.h... (cached) yes
checking for netdb.h... (cached) yes
checking for netinet/in.h... (cached) yes
checking for netinet/tcp.h... (cached) yes
checking poll.h usability... yes
checking poll.h presence... yes
checking for poll.h... yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking pty.h usability... yes
checking pty.h presence... yes
checking for pty.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for strings.h... (cached) yes
checking stropts.h usability... yes
checking stropts.h presence... yes
checking for stropts.h... yes
checking linux/ethtool.h usability... yes
checking linux/ethtool.h presence... yes
checking for linux/ethtool.h... yes
checking linux/sockios.h usability... yes
checking linux/sockios.h presence... yes
checking for linux/sockios.h... yes
checking sys/fcntl.h usability... yes
checking sys/fcntl.h presence... yes
checking for sys/fcntl.h... yes
checking sys/ipc.h usability... yes
checking sys/ipc.h presence... yes
checking for sys/ipc.h... yes
checking sys/shm.h usability... yes
checking sys/shm.h presence... yes
checking for sys/shm.h... yes
checking sys/ioctl.h usability... yes
checking sys/ioctl.h presence... yes
checking for sys/ioctl.h... yes
checking sys/mman.h usability... yes
checking sys/mman.h presence... yes
checking for sys/mman.h... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/queue.h usability... yes
checking sys/queue.h presence... yes
checking for sys/queue.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking sys/sockio.h usability... no
checking sys/sockio.h presence... no
checking for sys/sockio.h... no
checking for sys/stat.h... (cached) yes
checking sys/statfs.h usability... yes
checking sys/statfs.h presence... yes
checking for sys/statfs.h... yes
checking sys/statvfs.h usability... yes
checking sys/statvfs.h presence... yes
checking for sys/statvfs.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/tree.h usability... no
checking sys/tree.h presence... no
checking for sys/tree.h... no
checking for sys/types.h... (cached) yes
checking sys/uio.h usability... yes
checking sys/uio.h presence... yes
checking for sys/uio.h... yes
checking sys/un.h usability... yes
checking sys/un.h presence... yes
checking for sys/un.h... yes
checking net/uio.h usability... no
checking net/uio.h presence... no
checking for net/uio.h... no
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking sys/vfs.h usability... yes
checking sys/vfs.h presence... yes
checking for sys/vfs.h... yes
checking sys/wait.h usability... yes
checking sys/wait.h presence... yes
checking for sys/wait.h... yes
checking syslog.h usability... yes
checking syslog.h presence... yes
checking for syslog.h... yes
checking termios.h usability... yes
checking termios.h presence... yes
checking for termios.h... yes
checking ulimit.h usability... yes
checking ulimit.h presence... yes
checking for ulimit.h... yes
checking for unistd.h... (cached) yes
checking util.h usability... no
checking util.h presence... no
checking for util.h... no
checking utmp.h usability... yes
checking utmp.h presence... yes
checking for utmp.h... yes
checking malloc.h usability... yes
checking malloc.h presence... yes
checking for malloc.h... yes
checking ifaddrs.h usability... yes
checking ifaddrs.h presence... yes
checking for ifaddrs.h... yes
checking crt_externs.h usability... no
checking crt_externs.h presence... no
checking for crt_externs.h... no
checking regex.h usability... yes
checking regex.h presence... yes
checking for regex.h... yes
checking mntent.h usability... yes
checking mntent.h presence... yes
checking for mntent.h... yes
checking paths.h usability... yes
checking paths.h presence... yes
checking for paths.h... yes
checking ioLib.h usability... no
checking ioLib.h presence... no
checking for ioLib.h... no
checking sockLib.h usability... no
checking sockLib.h presence... no
checking for sockLib.h... no
checking hostLib.h usability... no
checking hostLib.h presence... no
checking for hostLib.h... no
checking shlwapi.h usability... no
checking shlwapi.h presence... no
checking for shlwapi.h... no
checking sys/synch.h usability... no
checking sys/synch.h presence... no
checking for sys/synch.h... no
checking db.h usability... yes
checking db.h presence... yes
checking for db.h... yes
checking ndbm.h usability... yes
checking ndbm.h presence... yes
checking for ndbm.h... yes
checking for zlib.h... (cached) yes
checking ieee754.h usability... yes
checking ieee754.h presence... yes
checking for ieee754.h... yes
checking for sys/mount.h... yes
checking for sys/sysctl.h... yes
checking for net/if.h... yes
============================================================================
== Type tests
============================================================================
checking for socklen_t... yes
checking for struct sockaddr_in... (cached) yes
checking for struct sockaddr_in6... yes
checking for struct sockaddr_storage... yes
checking for struct ifreq... yes
checking for struct ethtool_cmd... yes
checking whether ethtool_cmd_speed is declared... yes
checking whether SIOCETHTOOL is declared... yes
checking for struct ethtool_cmd.speed_hi... yes
checking for struct ethtool_cmd.speed_hi... (cached) yes
checking for struct ethtool_cmd.speed_hi... (cached) yes
checking for struct ethtool_cmd.speed_hi... (cached) yes
checking whether AF_UNSPEC is declared... yes
checking whether PF_UNSPEC is declared... yes
checking whether AF_INET6 is declared... yes
checking whether PF_INET6 is declared... yes
checking if SA_RESTART defined in signal.h... yes
checking for struct sockaddr.sa_len... no
checking for struct dirent.d_type... yes
checking for siginfo_t.si_fd... yes
checking for siginfo_t.si_band... yes
checking for struct statfs.f_type... yes
checking for struct statfs.f_fstypename... no
checking for struct statvfs.f_basetype... no
checking for struct statvfs.f_fstypename... no
checking for type of MPI_Aint... ptrdiff_t (size: 8)
checking for type of MPI_Count... long long (size: 8)
checking for type of MPI_Offset... long long (size: 8)
checking for an MPI datatype for MPI_Offset... MPI_LONG_LONG
checking for MPI_INTEGER_KIND... 4
checking for MPI_ADDRESS_KIND... 8
checking for MPI_COUNT_KIND... 8
checking for MPI_OFFSET_KIND... 8
checking the linker for support for the -fini option... yes
============================================================================
== Library and Function tests
============================================================================
checking for library containing openpty... -lutil
checking for library containing gethostbyname... none required
checking for library containing socket... none required
checking for library containing sched_yield... none required
checking for library containing dirname... none required
checking for library containing ceil... -lm
checking for library containing clock_gettime... none required
checking for asprintf... yes
checking for snprintf... yes
checking for vasprintf... yes
checking for vsnprintf... yes
checking for openpty... yes
checking for isatty... yes
checking for getpwuid... yes
checking for fork... yes
checking for waitpid... yes
checking for execve... yes
checking for pipe... yes
checking for ptsname... yes
checking for setsid... yes
checking for mmap... yes
checking for tcgetpgrp... yes
checking for posix_memalign... yes
checking for strsignal... yes
checking for sysconf... yes
checking for syslog... yes
checking for vsyslog... yes
checking for regcmp... no
checking for regexec... yes
checking for regfree... yes
checking for _NSGetEnviron... no
checking for socketpair... yes
checking for strncpy_s... no
checking for usleep... yes
checking for mkfifo... yes
checking for dbopen... no
checking for dbm_open... no
checking for statfs... yes
checking for statvfs... yes
checking for setpgid... yes
checking for setenv... yes
checking for __malloc_initialize_hook... no
checking for htonl define... no
checking for htonl... yes
checking whether va_copy is declared... yes
checking whether __va_copy is declared... yes
checking whether __func__ is declared... yes
============================================================================
== System-specific tests
============================================================================
checking for _SC_NPROCESSORS_ONLN... yes
checking whether byte ordering is bigendian... no
checking for broken qsort... no
checking if C compiler and POSIX threads work as is... no
checking if C++ compiler and POSIX threads work as is... no
checking if Fortran compiler and POSIX threads work as is... no
checking if C compiler and POSIX threads work with -Kthread... no
checking if C compiler and POSIX threads work with -kthread... no
checking if C compiler and POSIX threads work with -pthread... yes
checking if C++ compiler and POSIX threads work with -Kthread... no
checking if C++ compiler and POSIX threads work with -kthread... no
checking if C++ compiler and POSIX threads work with -pthread... yes
checking if Fortran compiler and POSIX threads work with -Kthread... no
checking if Fortran compiler and POSIX threads work with -kthread... no
checking if Fortran compiler and POSIX threads work with -pthread... yes
checking for pthread_mutexattr_setpshared... yes
checking for pthread_condattr_setpshared... yes
checking for PTHREAD_MUTEX_ERRORCHECK_NP... yes
checking for PTHREAD_MUTEX_ERRORCHECK... yes
checking for working POSIX threads package... yes
checking if threads have different pids (pthreads on linux)... no
checking whether ln -s works... yes
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/grep -E
checking dependency style of gcc-5... (cached) none
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... -lfl
checking whether yytext is a pointer... yes
checking for flavor of ps to use... ps -A -o fname,pid,uid
checking if build filesystem is case sensitive... yes
checking if configuring for case sensitive filesystem... yes
checking whether RLIMIT_NPROC is declared... yes
checking whether RLIMIT_MEMLOCK is declared... yes
checking whether RLIMIT_NOFILE is declared... yes
checking whether RLIMIT_FSIZE is declared... yes
checking whether RLIMIT_CORE is declared... yes
checking whether RLIMIT_STACK is declared... yes
checking whether RLIMIT_AS is declared... yes
============================================================================
== Modular Component Architecture (MCA) setup
============================================================================
checking for subdir args... '--prefix=/home/abel/.linuxbrew/Cellar/open-mpi/3.1.2' '--disable-dependency-tracking' '--disable-silent-rules' '--enable-ipv6' '--with-libevent=/home/abel/.linuxbrew/opt/libevent' '--with-sge' 'CC=gcc-5' 'CXX=g++-5' 'PKG_CONFIG_PATH=/home/abel/.linuxbrew/opt/zlib/lib/pkgconfig:/home/abel/.linuxbrew/opt/mpfr/lib/pkgconfig:/home/abel/.linuxbrew/opt/isl@0.18/lib/pkgconfig:/home/abel/.linuxbrew/opt/openssl/lib/pkgconfig:/home/abel/.linuxbrew/opt/libevent/lib/pkgconfig'
checking --with-verbs value... simple ok (unspecified value)
checking --with-verbs-libdir value... simple ok (unspecified value)
checking for pkg-config... /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for pkg-config... (cached) /usr/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for X... libraries , headers
==> Pre-emptively configuring the hwloc framework to satisfy dependencies.
checking whether to enable hwloc PCI device support... yes (default)
+++ Configuring MCA framework hwloc
checking for no configure components in framework hwloc...
checking for m4 configure components in framework hwloc... external, hwloc1117
--- MCA component hwloc:external (m4 configuration macro, priority 90)
checking for MCA component hwloc:external compile mode... static
checking if MCA component hwloc:external can compile... no
--- MCA component hwloc:hwloc1117 (m4 configuration macro, priority 90)
checking for MCA component hwloc:hwloc1117 compile mode... static
checking hwloc building mode... embedded
configure: hwloc builddir: /tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/hwloc/hwloc1117/hwloc
configure: hwloc srcdir: /tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/hwloc/hwloc1117/hwloc
checking for hwloc version... 1.11.7
checking if want hwloc maintainer support... disabled (embedded mode)
checking for hwloc directory prefix... opal/mca/hwloc/hwloc1117/hwloc/
checking for hwloc symbol prefix... opal_hwloc1117_
checking size of void *... (cached) 8
checking which OS support to include... Linux
checking which CPU support to include... x86_64
checking size of unsigned long... 8
checking size of unsigned int... 4
checking for the C compiler vendor... gnu
checking for __attribute__... yes
checking for __attribute__(aligned)... yes
checking for __attribute__(always_inline)... yes
checking for __attribute__(cold)... yes
checking for __attribute__(const)... yes
checking for __attribute__(deprecated)... yes
checking for __attribute__(format)... yes
checking for __attribute__(hot)... yes
checking for __attribute__(malloc)... yes
checking for __attribute__(may_alias)... yes
checking for __attribute__(no_instrument_function)... yes
checking for __attribute__(nonnull)... yes
checking for __attribute__(noreturn)... yes
checking for __attribute__(packed)... yes
checking for __attribute__(pure)... yes
checking for __attribute__(sentinel)... yes
checking for __attribute__(unused)... yes
checking for __attribute__(warn_unused_result)... yes
checking for __attribute__(weak_alias)... yes
checking if gcc-5 supports -fvisibility=hidden... yes
checking whether to enable symbol visibility... yes (via -fvisibility=hidden)
configure: WARNING: "-fvisibility=hidden" has been added to the hwloc CFLAGS
checking whether the C compiler rejects function calls with too many arguments... yes
checking whether the C compiler rejects function calls with too few arguments... yes
checking for unistd.h... (cached) yes
checking for dirent.h... (cached) yes
checking for strings.h... (cached) yes
checking ctype.h usability... yes
checking ctype.h presence... yes
checking for ctype.h... yes
checking for strncasecmp... yes
checking whether strncasecmp is declared... yes
checking whether function strncasecmp has a complete prototype... yes
checking for strftime... yes
checking for setlocale... yes
checking for stdint.h... (cached) yes
checking for sys/mman.h... (cached) yes
checking for KAFFINITY... no
checking for PROCESSOR_CACHE_TYPE... no
checking for CACHE_DESCRIPTOR... no
checking for LOGICAL_PROCESSOR_RELATIONSHIP... no
checking for RelationProcessorPackage... no
checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION... no
checking for GROUP_AFFINITY... no
checking for PROCESSOR_RELATIONSHIP... no
checking for NUMA_NODE_RELATIONSHIP... no
checking for CACHE_RELATIONSHIP... no
checking for PROCESSOR_GROUP_INFO... no
checking for GROUP_RELATIONSHIP... no
checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION_EX... no
checking for PSAPI_WORKING_SET_EX_BLOCK... no
checking for PSAPI_WORKING_SET_EX_INFORMATION... no
checking for PROCESSOR_NUMBER... no
checking for main in -lgdi32... no
checking for PostQuitMessage in -luser32... no
checking windows.h usability... no
checking windows.h presence... no
checking for windows.h... no
checking sys/lgrp_user.h usability... no
checking sys/lgrp_user.h presence... no
checking for sys/lgrp_user.h... no
checking kstat.h usability... no
checking kstat.h presence... no
checking for kstat.h... no
checking whether fabsf is declared... yes
checking for fabsf in -lm... yes
checking picl.h usability... no
checking picl.h presence... no
checking for picl.h... no
checking whether _SC_NPROCESSORS_ONLN is declared... yes
checking whether _SC_NPROCESSORS_CONF is declared... yes
checking whether _SC_NPROC_ONLN is declared... no
checking whether _SC_NPROC_CONF is declared... no
checking whether _SC_PAGESIZE is declared... yes
checking whether _SC_PAGE_SIZE is declared... yes
checking whether _SC_LARGE_PAGESIZE is declared... no
checking mach/mach_host.h usability... no
checking mach/mach_host.h presence... no
checking for mach/mach_host.h... no
checking mach/mach_init.h usability... no
checking mach/mach_init.h presence... no
checking for mach/mach_init.h... no
checking for sys/param.h... (cached) yes
checking for sys/sysctl.h... (cached) yes
checking whether CTL_HW is declared... no
checking whether HW_NCPU is declared... no
checking whether strtoull is declared... yes
checking for ssize_t... (cached) yes
checking whether snprintf is declared... yes
checking whether strcasecmp is declared... yes
checking whether _strdup is declared... no
checking whether _putenv is declared... no
checking whether getprogname is declared... no
checking whether getexecname is declared... no
checking whether GetModuleFileName is declared... no
checking for program_invocation_name... yes
checking for __progname... yes
checking for pthread_t... yes
checking whether sched_setaffinity is declared... yes
checking whether function sched_setaffinity has a complete prototype... yes
checking for old prototype of sched_setaffinity... no
checking for working CPU_SET... yes
checking for working CPU_SET_S... yes
checking for working syscall... yes
checking for KERRIGHED... no
checking for lib... no
checking for bash... /bin/sh
checking for ffs... yes
checking whether ffs is declared... yes
checking whether function ffs has a complete prototype... yes
checking for ffsl... yes
checking whether ffsl is declared... yes
checking whether function ffsl has a complete prototype... yes
checking for fls... no
checking for flsl... no
checking for clz... no
checking for clzl... no
checking for openat... yes
checking for malloc.h... (cached) yes
checking for getpagesize... yes
checking for memalign... yes
checking for posix_memalign... (cached) yes
checking for sys/utsname.h... (cached) yes
checking for uname... yes
checking pthread_np.h usability... no
checking pthread_np.h presence... no
checking for pthread_np.h... no
checking whether pthread_setaffinity_np is declared... yes
checking whether pthread_getaffinity_np is declared... yes
checking for sched_setaffinity... yes
checking for sys/cpuset.h... no
checking for cpuset_setaffinity... no
checking for library containing pthread_getthrds_np... no
checking for cpuset_setid... no
checking numaif.h usability... yes
checking numaif.h presence... yes
checking for numaif.h... yes
checking for numa_available in -lnuma... yes
checking for set_mempolicy in -lnuma... yes
checking for mbind in -lnuma... yes
checking for migrate_pages in -lnuma... yes
checking for move_pages in -lnuma... yes
checking libudev.h usability... yes
checking libudev.h presence... yes
checking for libudev.h... yes
checking for udev_device_new_from_subsystem_sysname in -ludev... yes
checking for PCIACCESS... yes
checking pciaccess.h usability... yes
checking pciaccess.h presence... yes
checking for pciaccess.h... yes
checking for pci_slot_match_iterator_create... yes
checking for final PCIACCESS support... yes
checking for gethostbyname... yes
checking for connect... yes
checking for remove... yes
checking for shmat... yes
checking for IceConnectionNumber in -lICE... yes
checking X11/Xlib.h usability... yes
checking X11/Xlib.h presence... yes
checking for X11/Xlib.h... yes
checking for XOpenDisplay in -lX11... yes
checking for X11/Xutil.h... yes
checking X11/keysym.h usability... yes
checking X11/keysym.h presence... yes
checking for X11/keysym.h... yes
checking for x86 cpuid... yes
checking for pthread_mutex_lock... yes
checking if plugin support is enabled... no
checking components to build statically... noos xml synthetic custom xml_nolibxml linux linuxpci pci x86
checking components to build as plugins...
checking whether hwloc configure succeeded... yes
checking infiniband/verbs.h usability... no
checking infiniband/verbs.h presence... no
checking for infiniband/verbs.h... no
checking if MCA component hwloc:hwloc1117 can compile... yes
checking for winning hwloc component header file... opal/mca/hwloc/hwloc1117/hwloc1117.h
<== Pre-emptive hwloc framework configuration complete.
<== We now return you to your regularly scheduled programming.
checking if user requested PMI support... no
checking which components should be disabled...
checking which components should be direct-linked into the library...
checking which components should be run-time loadable... all
checking which components should be static... none
checking for projects containing MCA frameworks... opal, orte, ompi, oshmem
*** Configuring MCA for opal
checking for frameworks for opal... common, allocator, backtrace, btl, compress, crs, dl, event, hwloc, if, installdirs, memchecker, memcpy, memory, mpool, patcher, pmix, pstat, rcache, reachable, shmem, timer
+++ Configuring MCA framework common
checking for no configure components in framework common...
checking for m4 configure components in framework common... cuda, ofi, sm, verbs, verbs_usnic
--- MCA component common:cuda (m4 configuration macro)
checking for MCA component common:cuda compile mode... dso
checking if MCA component common:cuda can compile... no
--- MCA component common:ofi (m4 configuration macro)
checking for MCA component common:ofi compile mode... dso
checking --with-ofi value... simple ok (unspecified value)
checking --with-ofi-libdir value... simple ok (unspecified value)
checking looking for OFI libfabric in... ()
checking rdma/fabric.h usability... no
checking rdma/fabric.h presence... no
checking for rdma/fabric.h... no
checking if MCA component common:ofi can compile... no
--- MCA component common:sm (m4 configuration macro)
checking for MCA component common:sm compile mode... dso
checking if MCA component common:sm can compile... yes
--- MCA component common:verbs (m4 configuration macro)
checking for MCA component common:verbs compile mode... dso
checking if want to add padding to the openib BTL control header... no
checking for fcntl.h... (cached) yes
checking sys/poll.h usability... yes
checking sys/poll.h presence... yes
checking for sys/poll.h... yes
checking infiniband/verbs.h usability... no
checking infiniband/verbs.h presence... no
checking for infiniband/verbs.h... no
checking if ConnectX XRC support is enabled... no
checking if ConnectIB XRC support is enabled... no
checking if dynamic SL is enabled... no
checking if MCA component common:verbs can compile... no
--- MCA component common:verbs_usnic (m4 configuration macro)
checking for MCA component common:verbs_usnic compile mode... static
checking if MCA component common:verbs_usnic can compile... no
+++ Configuring MCA framework allocator
checking for no configure components in framework allocator... basic, bucket
checking for m4 configure components in framework allocator...
--- MCA component allocator:basic (no configuration)
checking for MCA component allocator:basic compile mode... dso
checking if MCA component allocator:basic can compile... yes
--- MCA component allocator:bucket (no configuration)
checking for MCA component allocator:bucket compile mode... dso
checking if MCA component allocator:bucket can compile... yes
+++ Configuring MCA framework backtrace
checking for no configure components in framework backtrace...
checking for m4 configure components in framework backtrace... execinfo, none, printstack
--- MCA component backtrace:execinfo (m4 configuration macro, priority 30)
checking for MCA component backtrace:execinfo compile mode... static
checking for execinfo.h... (cached) yes
checking for library containing backtrace... none required
checking if MCA component backtrace:execinfo can compile... yes
--- MCA component backtrace:printstack (m4 configuration macro, priority 30)
checking for MCA component backtrace:printstack compile mode... static
checking ucontext.h usability... yes
checking ucontext.h presence... yes
checking for ucontext.h... yes
checking for printstack... no
checking if MCA component backtrace:printstack can compile... no
--- MCA component backtrace:none (m4 configuration macro, priority 0)
checking for MCA component backtrace:none compile mode... static
checking if MCA component backtrace:none can compile... no
+++ Configuring MCA framework btl
checking for no configure components in framework btl... self
checking for m4 configure components in framework btl... openib, portals4, scif, sm, smcuda, tcp, ugni, usnic, vader
--- MCA component btl:self (no configuration)
checking for MCA component btl:self compile mode... dso
checking if MCA component btl:self can compile... yes
--- MCA component btl:openib (m4 configuration macro)
checking for MCA component btl:openib compile mode... dso
checking whether expanded verbs are available... no
checking whether IBV_EXP_ATOMIC_HCA_REPLY_BE is declared... no
checking whether IBV_EXP_QP_CREATE_ATOMIC_BE_REPLY is declared... no
checking whether ibv_exp_create_qp is declared... no
checking whether ibv_exp_query_device is declared... no
checking whether IBV_EXP_QP_INIT_ATTR_ATOMICS_ARG is declared... no
checking for struct ibv_exp_device_attr.ext_atom... no
checking for struct ibv_exp_device_attr.exp_atomic_cap... no
checking if MCA component btl:openib can compile... no
--- MCA component btl:portals4 (m4 configuration macro)
checking for MCA component btl:portals4 compile mode... dso
checking --with-portals4 value... simple ok (unspecified value)
checking --with-portals4-libdir value... simple ok (unspecified value)
checking portals4.h usability... no
checking portals4.h presence... no
checking for portals4.h... no
checking whether to enable flow control... no
checking if MCA component btl:portals4 can compile... no
--- MCA component btl:scif (m4 configuration macro)
checking for MCA component btl:scif compile mode... dso
checking --with-scif value... simple ok (unspecified value)
checking scif.h usability... no
checking scif.h presence... no
checking for scif.h... no
checking if MCA component btl:scif can compile... no
--- MCA component btl:sm (m4 configuration macro)
checking for MCA component btl:sm compile mode... dso
checking if MCA component btl:sm can compile... yes
--- MCA component btl:smcuda (m4 configuration macro)
checking for MCA component btl:smcuda compile mode... dso
checking if MCA component btl:smcuda can compile... no
--- MCA component btl:tcp (m4 configuration macro)
checking for MCA component btl:tcp compile mode... dso
checking for struct sockaddr_in... (cached) yes
checking if MCA component btl:tcp can compile... yes
--- MCA component btl:ugni (m4 configuration macro)
checking for MCA component btl:ugni compile mode... dso
checking for CRAY_UGNI... no
checking if MCA component btl:ugni can compile... no
--- MCA component btl:usnic (m4 configuration macro)
checking for MCA component btl:usnic compile mode... dso
checking size of void *... (cached) 8
checking for 64 bit Linux... yes
checking whether OFI libfabric support is available... no
checking if MCA component btl:usnic can compile... no
--- MCA component btl:vader (m4 configuration macro)
checking for MCA component btl:vader compile mode... dso
checking for Cray XPMEM support... checking for CRAY_XPMEM... no
checking --with-xpmem value... simple ok (unspecified value)
checking --with-xpmem-libdir value... simple ok (unspecified value)
checking xpmem.h usability... no
checking xpmem.h presence... no
checking for xpmem.h... no
checking --with-knem value... simple ok (unspecified value)
checking knem_io.h usability... no
checking knem_io.h presence... no
checking for knem_io.h... no
checking sys/prctl.h usability... yes
checking sys/prctl.h presence... yes
checking for sys/prctl.h... yes
checking for process_vm_readv... yes
checking for sys/prctl.h... (cached) yes
checking if MCA component btl:vader can compile... yes
+++ Configuring MCA framework compress
checking for no configure components in framework compress... bzip, gzip
checking for m4 configure components in framework compress...
--- MCA component compress:bzip (no configuration)
checking for MCA component compress:bzip compile mode... dso
checking if MCA component compress:bzip can compile... yes
--- MCA component compress:gzip (no configuration)
checking for MCA component compress:gzip compile mode... dso
checking if MCA component compress:gzip can compile... yes
+++ Configuring MCA framework crs
checking for no configure components in framework crs... none
checking for m4 configure components in framework crs... self
--- MCA component crs:none (no configuration)
checking for MCA component crs:none compile mode... dso
checking if MCA component crs:none can compile... yes
--- MCA component crs:self (m4 configuration macro)
checking for MCA component crs:self compile mode... dso
checking if MCA component crs:self can compile... no
+++ Configuring MCA framework dl
checking for no configure components in framework dl...
checking for m4 configure components in framework dl... dlopen, libltdl
--- MCA component dl:dlopen (m4 configuration macro, priority 80)
checking for MCA component dl:dlopen compile mode... static
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
looking for library without search path
checking for library containing dlopen... -ldl
checking if libdl requires libnl v1 or v3...
checking if MCA component dl:dlopen can compile... yes
--- MCA component dl:libltdl (m4 configuration macro, priority 50)
checking for MCA component dl:libltdl compile mode... static
checking --with-libltdl value... simple ok (unspecified value)
checking --with-libltdl-libdir value... simple ok (unspecified value)
checking for libltdl dir... compiler default
checking for libltdl library dir... linker default
checking ltdl.h usability... yes
checking ltdl.h presence... yes
checking for ltdl.h... yes
looking for library without search path
checking for library containing lt_dlopen... -lltdl
checking if libltdl requires libnl v1 or v3...
checking for lt_dladvise_init... yes
checking if MCA component dl:libltdl can compile... no
+++ Configuring MCA framework event
checking for no configure components in framework event...
checking for m4 configure components in framework event... external, libevent2022
--- MCA component event:external (m4 configuration macro, priority 90)
checking for MCA component event:external compile mode... static
checking --with-libevent-libdir value... simple ok (unspecified value)
checking for external libevent in... /home/abel/.linuxbrew/opt/libevent
checking --with-libevent value... simple ok (unspecified value)
checking event.h usability... yes
checking event.h presence... yes
checking for event.h... yes
looking for library in lib
checking for library containing event_config_new... -levent
checking if libevent requires libnl v1 or v3...
checking for evthread_set_lock_callbacks in -levent... yes
checking for evthread_use_pthreads in -levent_pthreads... yes
checking if MCA component event:external can compile... yes
--- MCA component event:libevent2022 (m4 configuration macro, priority 80)
checking for MCA component event:libevent2022 compile mode... static
checking libevent configuration args... --disable-dns --disable-http --disable-rpc --disable-openssl --enable-thread-support --disable-evport
configure: OPAL configuring in opal/mca/event/libevent2022/libevent
configure: running /bin/sh './configure' --disable-dns --disable-http --disable-rpc --disable-openssl --enable-thread-support --disable-evport '--prefix=/home/abel/.linuxbrew/Cellar/open-mpi/3.1.2' '--disable-dependency-tracking' '--disable-silent-rules' '--enable-ipv6' '--with-libevent=/home/abel/.linuxbrew/opt/libevent' '--with-sge' 'CC=gcc-5' 'CXX=g++-5' 'PKG_CONFIG_PATH=/home/abel/.linuxbrew/opt/zlib/lib/pkgconfig:/home/abel/.linuxbrew/opt/mpfr/lib/pkgconfig:/home/abel/.linuxbrew/opt/isl@0.18/lib/pkgconfig:/home/abel/.linuxbrew/opt/openssl/lib/pkgconfig:/home/abel/.linuxbrew/opt/libevent/lib/pkgconfig' 'CPPFLAGS=-I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2 -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2 -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/include -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/hwloc/hwloc1117/hwloc/include -I/home/abel/.linuxbrew/opt/libevent/include -Drandom=opal_random' --cache-file=/dev/null --srcdir=. --disable-option-checking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for gcc... gcc-5
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc-5 accepts -g... yes
checking for gcc-5 option to accept ISO C89... none needed
checking whether gcc-5 understands -c and -o together... yes
checking for style of include used by make... GNU
checking dependency style of gcc-5... none
checking for a sed that does not truncate output... /usr/bin/sed
checking whether ln -s works... yes
checking how to run the C preprocessor... gcc-5 -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking whether gcc-5 needs -traditional... no
checking how to print strings... printf
checking for a sed that does not truncate output... (cached) /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc-5... /home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld
checking if the linker (/home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc-5 object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc-5 supports -fno-rtti -fno-exceptions... no
checking for gcc-5 option to produce PIC... -fPIC -DPIC
checking if gcc-5 PIC flag -fPIC -DPIC works... yes
checking if gcc-5 static flag -static works... yes
checking if gcc-5 supports -c -o file.o... yes
checking if gcc-5 supports -c -o file.o... (cached) yes
checking whether the gcc-5 linker (/home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for library containing inet_ntoa... none required
checking for library containing socket... none required
checking for library containing inet_aton... none required
checking for library containing clock_gettime... none required
checking for library containing sendfile... none required
checking for WIN32... no
checking for CYGWIN... no
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking for library containing inflateEnd... -lz
checking openssl/bio.h usability... yes
checking openssl/bio.h presence... yes
checking for openssl/bio.h... yes
checking for ANSI C header files... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking poll.h usability... yes
checking poll.h presence... yes
checking for poll.h... yes
checking for unistd.h... (cached) yes
checking sys/epoll.h usability... yes
checking sys/epoll.h presence... yes
checking for sys/epoll.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/queue.h usability... yes
checking sys/queue.h presence... yes
checking for sys/queue.h... yes
checking sys/event.h usability... no
checking sys/event.h presence... no
checking for sys/event.h... no
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/ioctl.h usability... yes
checking sys/ioctl.h presence... yes
checking for sys/ioctl.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/devpoll.h usability... no
checking sys/devpoll.h presence... no
checking for sys/devpoll.h... no
checking port.h usability... no
checking port.h presence... no
checking for port.h... no
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking netinet/in6.h usability... no
checking netinet/in6.h presence... no
checking for netinet/in6.h... no
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking sys/uio.h usability... yes
checking sys/uio.h presence... yes
checking for sys/uio.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking sys/eventfd.h usability... yes
checking sys/eventfd.h presence... yes
checking for sys/eventfd.h... yes
checking sys/mman.h usability... yes
checking sys/mman.h presence... yes
checking for sys/mman.h... yes
checking sys/sendfile.h usability... yes
checking sys/sendfile.h presence... yes
checking for sys/sendfile.h... yes
checking sys/wait.h usability... yes
checking sys/wait.h presence... yes
checking for sys/wait.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking for sys/stat.h... (cached) yes
checking for sys/sysctl.h... yes
checking for TAILQ_FOREACH in sys/queue.h... yes
checking for timeradd in sys/time.h... yes
checking for timercmp in sys/time.h... yes
checking for timerclear in sys/time.h... yes
checking for timerisset in sys/time.h... yes
checking whether CTL_KERN is declared... yes
checking whether KERN_RANDOM is declared... yes
checking whether RANDOM_UUID is declared... yes
checking whether KERN_ARND is declared... no
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking whether time.h and sys/time.h may both be included... yes
checking for gettimeofday... yes
checking for vasprintf... yes
checking for fcntl... yes
checking for clock_gettime... yes
checking for strtok_r... yes
checking for strsep... yes
checking for getnameinfo... yes
checking for strlcpy... no
checking for inet_ntop... yes
checking for inet_pton... yes
checking for signal... yes
checking for sigaction... yes
checking for strtoll... yes
checking for inet_aton... yes
checking for pipe... yes
checking for eventfd... yes
checking for sendfile... yes
checking for mmap... yes
checking for splice... yes
checking for arc4random... no
checking for arc4random_buf... no
checking for issetugid... no
checking for geteuid... yes
checking for getegid... yes
checking for getprotobynumber... yes
checking for setenv... yes
checking for unsetenv... yes
checking for putenv... yes
checking for sysctl... yes
checking for umask... yes
checking for getaddrinfo... yes
checking size of long... 8
checking for F_SETFD in fcntl.h... yes
checking for select... yes
checking for select support... yes
checking for poll... yes
checking for poll support... yes
checking for /dev/poll support... no
checking for epoll support... enabled
checking for epoll_ctl... yes
checking if epoll can build... yes
checking for working epoll library interface... yes
checking for epoll syscall support... no
checking for evport support... no
checking event_ops... yes
checking for working ops... yes
checking for pid_t... yes
checking for size_t... yes
checking for ssize_t... yes
checking for uint64_t... yes
checking for uint32_t... yes
checking for uint16_t... yes
checking for uint8_t... yes
checking for uintptr_t... yes
checking for fd_mask... yes
checking size of long long... 8
checking size of long... (cached) 8
checking size of int... 4
checking size of short... 2
checking size of size_t... 8
checking size of void *... 8
checking for struct in6_addr... yes
checking for struct sockaddr_in6... yes
checking for sa_family_t... yes
checking for struct addrinfo... yes
checking for struct sockaddr_storage... yes
checking for struct in6_addr.s6_addr32... yes
checking for struct in6_addr.s6_addr16... yes
checking for struct sockaddr_in.sin_len... no
checking for struct sockaddr_in6.sin6_len... no
checking for struct sockaddr_storage.ss_family... yes
checking for struct sockaddr_storage.__ss_family... no
checking for socklen_t... yes
checking whether our compiler supports __func__... yes
checking for the pthreads library -lpthreads... no
checking whether pthreads work without any flags... no
checking whether pthreads work with -Kthread... no
checking whether pthreads work with -kthread... no
checking for the pthreads library -llthread... no
checking whether pthreads work with -pthread... yes
checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
checking if more special flags are required for pthreads... no
checking size of pthread_t... 8
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating libevent.pc
config.status: creating libevent_openssl.pc
config.status: creating libevent_pthreads.pc
config.status: creating Makefile
config.status: creating include/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: /bin/sh './configure' succeeded for opal/mca/event/libevent2022/libevent
configure: WARNING: using an external libevent; disqualifying this component
checking if MCA component event:libevent2022 can compile... no
checking if have working event ops for the event framework... yes
checking for winning event component header file... external/external.h
+++ Configuring MCA framework if
checking for no configure components in framework if...
checking for m4 configure components in framework if... bsdx_ipv4, bsdx_ipv6, linux_ipv6, posix_ipv4, solaris_ipv6
--- MCA component if:bsdx_ipv4 (m4 configuration macro)
checking for MCA component if:bsdx_ipv4 compile mode... static
checking struct sockaddr... yes (cached)
checking NetBSD, FreeBSD, OpenBSD, or DragonFly... no
checking if MCA component if:bsdx_ipv4 can compile... no
--- MCA component if:bsdx_ipv6 (m4 configuration macro)
checking for MCA component if:bsdx_ipv6 compile mode... static
checking struct sockaddr... yes (cached)
checking some flavor of BSD... no
checking if MCA component if:bsdx_ipv6 can compile... no
--- MCA component if:linux_ipv6 (m4 configuration macro)
checking for MCA component if:linux_ipv6 compile mode... static
checking if we are on Linux with TCP... yes
checking if MCA component if:linux_ipv6 can compile... yes
--- MCA component if:posix_ipv4 (m4 configuration macro)
checking for MCA component if:posix_ipv4 compile mode... static
checking struct sockaddr... yes (cached)
checking not NetBSD, FreeBSD, OpenBSD, or DragonFly... yes
checking for struct ifreq.ifr_hwaddr... yes
checking for struct ifreq.ifr_mtu... yes
checking if MCA component if:posix_ipv4 can compile... yes
--- MCA component if:solaris_ipv6 (m4 configuration macro)
checking for MCA component if:solaris_ipv6 compile mode... static
checking if MCA component if:solaris_ipv6 can compile... no
+++ Configuring MCA framework installdirs
checking for no configure components in framework installdirs...
checking for m4 configure components in framework installdirs... config, env
--- MCA component installdirs:env (m4 configuration macro, priority 10)
checking for MCA component installdirs:env compile mode... static
checking if MCA component installdirs:env can compile... yes
--- MCA component installdirs:config (m4 configuration macro, priority 0)
checking for MCA component installdirs:config compile mode... static
checking if MCA component installdirs:config can compile... yes
+++ Pre-configuring the framework memchecker
checking if --enable-memchecker was specified... no (adding "memchecker" to --enable-mca-no-build list)
+++ Configuring MCA framework memchecker
checking for no configure components in framework memchecker...
checking for m4 configure components in framework memchecker... valgrind
--- MCA component memchecker:valgrind (m4 configuration macro, priority 10)
checking for MCA component memchecker:valgrind compile mode... static
checking --with-valgrind value... simple ok (unspecified value)
checking valgrind/valgrind.h usability... yes
checking valgrind/valgrind.h presence... yes
checking for valgrind/valgrind.h... yes
checking for VALGRIND_CHECK_MEM_IS_ADDRESSABLE... yes
checking if MCA component memchecker:valgrind can compile... no
+++ Configuring MCA framework memcpy
checking for no configure components in framework memcpy...
checking for m4 configure components in framework memcpy...
+++ Configuring MCA framework memory
checking for no configure components in framework memory...
checking for m4 configure components in framework memory... malloc_solaris, patcher
--- MCA component memory:patcher (m4 configuration macro, priority 41)
checking for MCA component memory:patcher compile mode... static
checking for __curbrk... yes
checking linux/mman.h usability... yes
checking linux/mman.h presence... yes
checking for linux/mman.h... yes
checking sys/syscall.h usability... yes
checking sys/syscall.h presence... yes
checking for sys/syscall.h... yes
checking whether __mmap is declared... no
checking for __mmap... yes
checking whether __syscall is declared... no
checking for __syscall... no
checking if MCA component memory:patcher can compile... yes
--- MCA component memory:malloc_solaris (m4 configuration macro, priority 0)
checking for MCA component memory:malloc_solaris compile mode... static
checking for Solaris... no
checking if MCA component memory:malloc_solaris can compile... no
+++ Configuring MCA framework mpool
checking for no configure components in framework mpool... hugepage
checking for m4 configure components in framework mpool... memkind
--- MCA component mpool:hugepage (no configuration)
checking for MCA component mpool:hugepage compile mode... dso
checking if MCA component mpool:hugepage can compile... yes
--- MCA component mpool:memkind (m4 configuration macro)
checking for MCA component mpool:memkind compile mode... dso
checking --with-memkind value... simple ok (unspecified value)
checking memkind.h usability... no
checking memkind.h presence... no
checking for memkind.h... no
checking if MCA component mpool:memkind can compile... no
+++ Configuring MCA framework patcher
checking for no configure components in framework patcher...
checking for m4 configure components in framework patcher... linux, overwrite
--- MCA component patcher:linux (m4 configuration macro)
checking for MCA component patcher:linux compile mode... dso
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
looking for library without search path
checking for library containing dl_iterate_phdr... none required
checking if libdl requires libnl v1 or v3...
checking elf.h usability... yes
checking elf.h presence... yes
checking for elf.h... yes
checking sys/auxv.h usability... yes
checking sys/auxv.h presence... yes
checking for sys/auxv.h... yes
checking if MCA component patcher:linux can compile... no
--- MCA component patcher:overwrite (m4 configuration macro)
checking for MCA component patcher:overwrite compile mode... dso
checking if MCA component patcher:overwrite can compile... yes
+++ Configuring MCA framework pmix
checking for no configure components in framework pmix... isolated
checking for m4 configure components in framework pmix... cray, ext1x, ext2x, flux, pmix2x, s1, s2
--- MCA component pmix:isolated (no configuration)
checking for MCA component pmix:isolated compile mode... dso
checking if MCA component pmix:isolated can compile... yes
--- MCA component pmix:cray (m4 configuration macro)
checking for MCA component pmix:cray compile mode... dso
checking for Cray PMI support... checking for CRAY_PMI... no
checking for ALPS support cle level unknown... checking for CRAY_ALPSLLI... no
checking for CRAY_ALPSUTIL... no
checking for CRAY_ALPS... no
checking for CRAY_WLM_DETECT... no
opal_check_cray_alps_happy = no
checking if MCA component pmix:cray can compile... no
--- MCA component pmix:ext1x (m4 configuration macro)
checking for MCA component pmix:ext1x compile mode... dso
checking if MCA component pmix:ext1x can compile... no
--- MCA component pmix:ext2x (m4 configuration macro)
checking for MCA component pmix:ext2x compile mode... dso
checking if MCA component pmix:ext2x can compile... no
--- MCA component pmix:flux (m4 configuration macro)
checking for MCA component pmix:flux compile mode... dso
checking if user wants Flux support to link against PMI library... no
checking if Flux support allowed to use dlopen... yes
checking Checking if Flux PMI support can be built... yes
checking if MCA component pmix:flux can compile... yes
--- MCA component pmix:pmix2x (m4 configuration macro)
checking for MCA component pmix:pmix2x compile mode... dso
checking if PMIx timing is enabled... no (disabled)
configure: OPAL configuring in opal/mca/pmix/pmix2x/pmix
configure: running /bin/sh './configure' --enable-embedded-mode --disable-debug --with-pmix-symbol-rename=OPAL_MCA_PMIX2X_ --disable-pmix-timing --without-tests-examples --disable-pmix-backward-compatibility --disable-visibility --enable-embedded-libevent --with-libevent-header=\"opal/mca/event/external/external.h\" '--prefix=/home/abel/.linuxbrew/Cellar/open-mpi/3.1.2' '--disable-dependency-tracking' '--disable-silent-rules' '--enable-ipv6' '--with-libevent=/home/abel/.linuxbrew/opt/libevent' '--with-sge' 'CC=gcc-5' 'CXX=g++-5' 'PKG_CONFIG_PATH=/home/abel/.linuxbrew/opt/zlib/lib/pkgconfig:/home/abel/.linuxbrew/opt/mpfr/lib/pkgconfig:/home/abel/.linuxbrew/opt/isl@0.18/lib/pkgconfig:/home/abel/.linuxbrew/opt/openssl/lib/pkgconfig:/home/abel/.linuxbrew/opt/libevent/lib/pkgconfig' 'CFLAGS=-O3 -DNDEBUG ' 'CPPFLAGS=-I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2 -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2 -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/include -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/include -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/hwloc/hwloc1117/hwloc/include -I/home/abel/.linuxbrew/opt/libevent/include' --cache-file=/dev/null --srcdir=. --disable-option-checking
configure: builddir: /tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/pmix/pmix2x/pmix
configure: srcdir: /tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/pmix/pmix2x/pmix
============================================================================
== Configuring PMIx
============================================================================
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking target system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether make supports nested variables... (cached) yes
checking for style of include used by make... GNU
checking for gcc... gcc-5
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc-5 accepts -g... yes
checking for gcc-5 option to accept ISO C89... none needed
checking whether gcc-5 understands -c and -o together... yes
checking dependency style of gcc-5... none
checking how to run the C preprocessor... gcc-5 -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for ar... ar
checking the archiver (ar) interface... ar
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... -lfl
checking whether yytext is a pointer... yes
checking if want dlopen support... yes
checking if embedded mode is enabled... yes
checking if want developer-level compiler pickyness... no
checking if want developer-level debugging code... no
checking if want to install project-internal header files... no
checking if tests and examples are to be installed... no
checking if want pretty-print stacktrace... yes
checking if want dstore pthread-based locking... yes
checking if want ident string...
checking if want developer-level timing support... no
checking if want to head developer-level header files... no
checking if want backward compatibility for PMI-1 and PMI-2... yes
installing to directory "/home/abel/.linuxbrew/Cellar/open-mpi/3.1.2"
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc-5... /home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld
checking if the linker (/home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... @
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc-5 object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc-5 supports -fno-rtti -fno-exceptions... no
checking for gcc-5 option to produce PIC... -fPIC -DPIC
checking if gcc-5 PIC flag -fPIC -DPIC works... yes
checking if gcc-5 static flag -static works... yes
checking if gcc-5 supports -c -o file.o... yes
checking if gcc-5 supports -c -o file.o... (cached) yes
checking whether the gcc-5 linker (/home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking whether we are using the GNU C++ compiler... yes
checking whether g++-5 accepts -g... yes
checking dependency style of g++-5... none
checking how to run the C++ preprocessor... g++-5 -E
checking for ld used by g++-5... /home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld -m elf_x86_64
checking if the linker (/home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld -m elf_x86_64) is GNU ld... yes
checking whether the g++-5 linker (/home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld -m elf_x86_64) supports shared libraries... yes
checking for g++-5 option to produce PIC... -fPIC -DPIC
checking if g++-5 PIC flag -fPIC -DPIC works... yes
checking if g++-5 static flag -static works... yes
checking if g++-5 supports -c -o file.o... yes
checking if g++-5 supports -c -o file.o... (cached) yes
checking whether the g++-5 linker (/home/abel/.linuxbrew/Homebrew/Library/Homebrew/shims/linux/super/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
*** C compiler and preprocessor
checking for gcc... (cached) gcc-5
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc-5 accepts -g... (cached) yes
checking for gcc-5 option to accept ISO C89... (cached) none needed
checking whether gcc-5 understands -c and -o together... (cached) yes
checking dependency style of gcc-5... (cached) none
checking for BSD- or MS-compatible name lister (nm)... (cached) /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm
checking __NetBSD__... no
checking __FreeBSD__... no
checking __OpenBSD__... no
checking __DragonFly__... no
checking __386BSD__... no
checking __bsdi__... no
checking __APPLE__... no
checking __linux__... yes
checking __sun__... no
checking __sun... no
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking netinet/tcp.h usability... yes
checking netinet/tcp.h presence... yes
checking for netinet/tcp.h... yes
checking for struct sockaddr_in... yes
configure: pmix builddir: /tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/pmix/pmix2x/pmix
configure: pmix srcdir: /tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/pmix/pmix2x/pmix
checking for pmix version... 2.1.3rc1
checking if want pmix maintainer support... disabled
checking for pmix directory prefix... (none)
checking for symbol rename... OPAL_MCA_PMIX2X_
checking for extra lib... no
============================================================================
== Compiler and preprocessor tests
============================================================================
checking if gcc-5 requires a flag for C11... no
configure: verifying gcc-5 supports C11 without a flag
checking if gcc-5 supports C11 _Thread_local... yes
checking if gcc-5 supports C11 atomic variables... yes
checking if gcc-5 supports C11 _Atomic keyword... yes
checking if gcc-5 supports C11 _Generic keyword... yes
checking if gcc-5 supports C11 _Static_assert... yes
configure: no flag required for C11 support
checking if gcc-5 supports __thread... yes
checking for the C compiler vendor... gnu
checking for ANSI C header files... (cached) yes
checking if gcc-5 supports -finline-functions... yes
checking if gcc-5 supports -fno-strict-aliasing... yes
configure: WARNING: -fno-strict-aliasing has been added to CFLAGS
checking if gcc-5 supports __builtin_expect... yes
checking if gcc-5 supports __builtin_prefetch... yes
checking if gcc-5 supports __builtin_clz... yes
checking for C optimization flags... -DNDEBUG -O3 -finline-functions -fno-strict-aliasing
checking for int8_t... yes
checking for uint8_t... yes
checking for int16_t... yes
checking for uint16_t... yes
checking for int32_t... yes
checking for uint32_t... yes
checking for int64_t... yes
checking for uint64_t... yes
checking for __int128... yes
checking for uint128_t... no
checking for long long... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking for ptrdiff_t... yes
checking size of _Bool... 1
checking size of char... 1
checking size of short... 2
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of float... 4
checking size of double... 8
checking size of void *... 8
checking size of size_t... 8
checking size of ptrdiff_t... 8
checking size of wchar_t... 4
checking size of pid_t... 4
checking alignment of bool... 1
checking alignment of int8_t... 1
checking alignment of int16_t... 2
checking alignment of int32_t... 4
checking alignment of int64_t... 8
checking alignment of char... 1
checking alignment of short... 2
checking alignment of wchar_t... 4
checking alignment of int... 4
checking alignment of long... 8
checking alignment of long long... 8
checking alignment of float... 4
checking alignment of double... 8
checking alignment of void *... 8
checking alignment of size_t... 8
checking for C bool type... no
checking size of _Bool... (cached) 1
checking for inline... __inline__
*** Compiler characteristics
checking for __attribute__... yes
checking for __attribute__(aligned)... yes
checking for __attribute__(always_inline)... yes
checking for __attribute__(cold)... yes
checking for __attribute__(const)... yes
checking for __attribute__(deprecated)... yes
checking for __attribute__(deprecated_argument)... yes
checking for __attribute__(format)... yes
checking for __attribute__(format_funcptr)... yes
checking for __attribute__(hot)... yes
checking for __attribute__(malloc)... yes
checking for __attribute__(may_alias)... yes
checking for __attribute__(no_instrument_function)... yes
checking for __attribute__(nonnull)... yes
checking for __attribute__(noreturn)... yes
checking for __attribute__(noreturn_funcptr)... yes
checking for __attribute__(packed)... yes
checking for __attribute__(pure)... yes
checking for __attribute__(sentinel)... yes
checking for __attribute__(unused)... yes
checking for __attribute__(visibility)... yes
checking for __attribute__(warn_unused_result)... yes
checking for __attribute__(destructor)... yes
checking for __attribute__(optnone)... no
checking for __attribute__(extension)... yes
checking for compiler familyid... 0
checking for compiler familyname... UNKNOWN
checking for compiler version... 0
checking for compiler version_str... UNKNOWN
*** Assembler
checking dependency style of gcc-5... none
checking for perl... /usr/bin/perl
checking for __atomic builtin atomics... yes
checking for processor support of __atomic builtin atomic compare-and-swap on 128-bit values... no
checking for __atomic builtin atomic compare-and-swap on 128-bit values with -mcx16 flag... yes
checking if __int128 atomic compare-and-swap is always lock-free... yes
checking if .proc/endp is needed... no
checking directive for setting text section... .text
checking directive for exporting symbols... .globl
checking for objdump... objdump
checking if .note.GNU-stack is needed... yes
checking suffix for labels... :
checking prefix for global symbol labels...
checking prefix for lsym labels... .L
checking prefix for function in .type... @
checking if .size is needed... yes
checking if .align directive takes logarithmic value... no
checking if processor supports x86_64 16-byte compare-and-exchange... yes
checking if compiler correctly handles volatile 128bits... yes
checking for assembly architecture... X86_64
checking for builtin atomics... BUILTIN_GCC
============================================================================
== Header file tests
============================================================================
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking ifaddrs.h usability... yes
checking ifaddrs.h presence... yes
checking for ifaddrs.h... yes
checking for inttypes.h... (cached) yes
checking libgen.h usability... yes
checking libgen.h presence... yes
checking for libgen.h... yes
checking net/uio.h usability... no
checking net/uio.h presence... no
checking for net/uio.h... no
checking for netinet/in.h... (cached) yes
checking for stdint.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking sys/ioctl.h usability... yes
checking sys/ioctl.h presence... yes
checking for sys/ioctl.h... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking sys/sockio.h usability... no
checking sys/sockio.h presence... no
checking for sys/sockio.h... no
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for sys/types.h... (cached) yes
checking sys/un.h usability... yes
checking sys/un.h presence... yes
checking for sys/un.h... yes
checking sys/uio.h usability... yes
checking sys/uio.h presence... yes
checking for sys/uio.h... yes
checking sys/wait.h usability... yes
checking sys/wait.h presence... yes
checking for sys/wait.h... yes
checking syslog.h usability... yes
checking syslog.h presence... yes
checking for syslog.h... yes
checking time.h usability... yes
checking time.h presence... yes
checking for time.h... yes
checking for unistd.h... (cached) yes
checking dirent.h usability... yes
checking dirent.h presence... yes
checking for dirent.h... yes
checking crt_externs.h usability... no
checking crt_externs.h presence... no
checking for crt_externs.h... no
checking signal.h usability... yes
checking signal.h presence... yes
checking for signal.h... yes
checking ioLib.h usability... no
checking ioLib.h presence... no
checking for ioLib.h... no
checking sockLib.h usability... no
checking sockLib.h presence... no
checking for sockLib.h... no
checking hostLib.h usability... no
checking hostLib.h presence... no
checking for hostLib.h... no
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking sys/statfs.h usability... yes
checking sys/statfs.h presence... yes
checking for sys/statfs.h... yes
checking sys/statvfs.h usability... yes
checking sys/statvfs.h presence... yes
checking for sys/statvfs.h... yes
checking for netdb.h... (cached) yes
checking ucred.h usability... no
checking ucred.h presence... no
checking for ucred.h... no
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking for sys/mount.h... yes
checking for sys/sysctl.h... yes
checking for net/if.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking if <stdbool.h> works... yes
============================================================================
== Type tests
============================================================================
checking for socklen_t... yes
checking for struct sockaddr_in... (cached) yes
checking for struct sockaddr_un... yes
checking for struct sockaddr_in6... yes
checking for struct sockaddr_storage... yes
checking whether AF_UNSPEC is declared... yes
checking whether PF_UNSPEC is declared... yes
checking whether AF_INET6 is declared... yes
checking whether PF_INET6 is declared... yes
checking if SA_RESTART defined in signal.h... yes
checking for struct sockaddr.sa_len... no
checking for struct dirent.d_type... yes
checking for siginfo_t.si_fd... yes
checking for siginfo_t.si_band... yes
checking for struct statfs.f_type... yes
checking for struct statfs.f_fstypename... no
checking for struct statvfs.f_basetype... no
checking for struct statvfs.f_fstypename... no
checking for struct ucred.uid... yes
checking for struct ucred.cr_uid... no
checking for struct sockpeercred.uid... no
checking for pointer diff type... ptrdiff_t (size: 8)
checking the linker for support for the -fini option... yes
============================================================================
== Library and Function tests
============================================================================
checking for library containing socket... none required
checking for library containing dirname... none required
checking for library containing ceil... -lm
checking for asprintf... yes
checking for snprintf... yes
checking for vasprintf... yes
checking for vsnprintf... yes
checking for strsignal... yes
checking for socketpair... yes
checking for strncpy_s... no
checking for usleep... yes
checking for statfs... yes
checking for statvfs... yes
checking for getpeereid... no
checking for getpeerucred... no
checking for strnlen... yes
checking for posix_fallocate... yes
checking for htonl define... no
checking for htonl... yes
checking for pandoc... yes
checking whether va_copy is declared... yes
checking whether __va_copy is declared... yes
checking whether __func__ is declared... yes
============================================================================
== System-specific tests
============================================================================
checking whether byte ordering is bigendian... no
checking for broken qsort... no
checking if C compiler and POSIX threads work as is... no
checking if C++ compiler and POSIX threads work as is... no
checking if C compiler and POSIX threads work with -Kthread... no
checking if C compiler and POSIX threads work with -kthread... no
checking if C compiler and POSIX threads work with -pthread... yes
checking if C++ compiler and POSIX threads work with -Kthread... no
checking if C++ compiler and POSIX threads work with -kthread... no
checking if C++ compiler and POSIX threads work with -pthread... yes
checking for pthread_mutexattr_setpshared... yes
checking for pthread_condattr_setpshared... yes
checking for PTHREAD_MUTEX_ERRORCHECK_NP... yes
checking for PTHREAD_MUTEX_ERRORCHECK... yes
checking for working POSIX threads package... yes
checking if threads have different pids (pthreads on linux)... no
checking whether ln -s works... yes
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/grep -E
============================================================================
== Symbol visibility feature
============================================================================
checking whether to enable symbol visibility... no (disabled)
============================================================================
== Libevent
============================================================================
checking for libevent... assumed available (embedded mode)
checking libevent header... "opal/mca/event/external/external.h"
checking libevent2/thread header... "opal/mca/event/external/external.h"
============================================================================
== ZLIB
============================================================================
checking for zlib in... (default search paths)
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
looking for library without search path
checking for library containing deflate... -lz
checking will zlib support be built... yes
============================================================================
== Modular Component Architecture (MCA) setup
============================================================================
checking for default value of mca_base_component_show_load_errors... enabled by default
checking for subdir args... '--enable-embedded-mode' '--disable-debug' '--with-pmix-symbol-rename=OPAL_MCA_PMIX2X_' '--disable-pmix-timing' '--without-tests-examples' '--disable-pmix-backward-compatibility' '--disable-visibility' '--enable-embedded-libevent' '--with-libevent-header=opal/mca/event/external/external.h' '--prefix=/home/abel/.linuxbrew/Cellar/open-mpi/3.1.2' '--disable-dependency-tracking' '--disable-silent-rules' '--enable-ipv6' '--with-libevent=/home/abel/.linuxbrew/opt/libevent' '--with-sge' 'CC=gcc-5' 'CXX=g++-5' 'PKG_CONFIG_PATH=/home/abel/.linuxbrew/opt/zlib/lib/pkgconfig:/home/abel/.linuxbrew/opt/mpfr/lib/pkgconfig:/home/abel/.linuxbrew/opt/isl@0.18/lib/pkgconfig:/home/abel/.linuxbrew/opt/openssl/lib/pkgconfig:/home/abel/.linuxbrew/opt/libevent/lib/pkgconfig' 'CFLAGS=-O3 -DNDEBUG ' 'CPPFLAGS=-I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2 -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2 -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/include -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/include -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/hwloc/hwloc1117/hwloc/include -I/home/abel/.linuxbrew/opt/libevent/include' '--disable-option-checking'
checking which components should be disabled...
checking which components should be direct-linked into the library...
checking which components should be run-time loadable... all
checking which components should be static... none
*** Configuring MCA
checking for frameworks... bfrops, gds, pdl, pif, pinstalldirs, pnet, preg, psec, psensor, pshmem, ptl
+++ Configuring MCA framework bfrops
checking for no configure components in framework bfrops... v12, v20, v21
checking for m4 configure components in framework bfrops...
--- MCA component bfrops:v12 (no configuration)
checking for MCA component bfrops:v12 compile mode... dso
checking if MCA component bfrops:v12 can compile... yes
--- MCA component bfrops:v20 (no configuration)
checking for MCA component bfrops:v20 compile mode... dso
checking if MCA component bfrops:v20 can compile... yes
--- MCA component bfrops:v21 (no configuration)
checking for MCA component bfrops:v21 compile mode... dso
checking if MCA component bfrops:v21 can compile... yes
+++ Configuring MCA framework gds
checking for no configure components in framework gds... ds12, hash
checking for m4 configure components in framework gds...
--- MCA component gds:ds12 (no configuration)
checking for MCA component gds:ds12 compile mode... dso
checking if MCA component gds:ds12 can compile... yes
--- MCA component gds:hash (no configuration)
checking for MCA component gds:hash compile mode... dso
checking if MCA component gds:hash can compile... yes
+++ Configuring MCA framework pdl
checking for no configure components in framework pdl...
checking for m4 configure components in framework pdl... pdlopen, plibltdl
--- MCA component pdl:pdlopen (m4 configuration macro, priority 80)
checking for MCA component pdl:pdlopen compile mode... static
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
looking for library without search path
checking for library containing dlopen... -ldl
checking if MCA component pdl:pdlopen can compile... yes
--- MCA component pdl:plibltdl (m4 configuration macro, priority 50)
checking for MCA component pdl:plibltdl compile mode... static
checking --with-plibltdl value... simple ok (unspecified)
checking --with-plibltdl-libdir value... simple ok (unspecified)
checking for libltdl dir... compiler default
checking for libltdl library dir... linker default
checking ltdl.h usability... yes
checking ltdl.h presence... yes
checking for ltdl.h... yes
looking for library without search path
checking for library containing lt_dlopen... -lltdl
checking for lt_dladvise_init... yes
checking if MCA component pdl:plibltdl can compile... no
+++ Configuring MCA framework pif
checking for no configure components in framework pif...
checking for m4 configure components in framework pif... bsdx_ipv4, bsdx_ipv6, linux_ipv6, posix_ipv4, solaris_ipv6
--- MCA component pif:bsdx_ipv4 (m4 configuration macro)
checking for MCA component pif:bsdx_ipv4 compile mode... static
checking struct sockaddr... yes (cached)
checking NetBSD, FreeBSD, OpenBSD, or DragonFly... no
checking if MCA component pif:bsdx_ipv4 can compile... no
--- MCA component pif:bsdx_ipv6 (m4 configuration macro)
checking for MCA component pif:bsdx_ipv6 compile mode... static
checking struct sockaddr... yes (cached)
checking some flavor of BSD... no
checking if MCA component pif:bsdx_ipv6 can compile... no
--- MCA component pif:linux_ipv6 (m4 configuration macro)
checking for MCA component pif:linux_ipv6 compile mode... static
checking if we are on Linux with TCP... yes
checking if MCA component pif:linux_ipv6 can compile... yes
--- MCA component pif:posix_ipv4 (m4 configuration macro)
checking for MCA component pif:posix_ipv4 compile mode... static
checking struct sockaddr... yes (cached)
checking not NetBSD, FreeBSD, OpenBSD, or DragonFly... yes
checking for struct ifreq.ifr_hwaddr... yes
checking for struct ifreq.ifr_mtu... yes
checking if MCA component pif:posix_ipv4 can compile... yes
--- MCA component pif:solaris_ipv6 (m4 configuration macro)
checking for MCA component pif:solaris_ipv6 compile mode... static
checking if MCA component pif:solaris_ipv6 can compile... no
+++ Configuring MCA framework pinstalldirs
checking for no configure components in framework pinstalldirs...
checking for m4 configure components in framework pinstalldirs... config, env
--- MCA component pinstalldirs:env (m4 configuration macro, priority 10)
checking for MCA component pinstalldirs:env compile mode... static
checking if MCA component pinstalldirs:env can compile... yes
--- MCA component pinstalldirs:config (m4 configuration macro, priority 0)
checking for MCA component pinstalldirs:config compile mode... static
checking if MCA component pinstalldirs:config can compile... yes
+++ Configuring MCA framework pnet
checking for no configure components in framework pnet...
checking for m4 configure components in framework pnet... opa
--- MCA component pnet:opa (m4 configuration macro)
checking for MCA component pnet:opa compile mode... dso
checking --with-psm2 value... simple ok (unspecified)
checking --with-psm2-libdir value... simple ok (unspecified)
checking psm2.h usability... no
checking psm2.h presence... no
checking for psm2.h... no
checking if MCA component pnet:opa can compile... no
+++ Configuring MCA framework preg
checking for no configure components in framework preg... native
checking for m4 configure components in framework preg...
--- MCA component preg:native (no configuration)
checking for MCA component preg:native compile mode... dso
checking if MCA component preg:native can compile... yes
+++ Configuring MCA framework psec
checking for no configure components in framework psec... native, none
checking for m4 configure components in framework psec... munge
--- MCA component psec:native (no configuration)
checking for MCA component psec:native compile mode... dso
checking if MCA component psec:native can compile... yes
--- MCA component psec:none (no configuration)
checking for MCA component psec:none compile mode... dso
checking if MCA component psec:none can compile... yes
--- MCA component psec:munge (m4 configuration macro)
checking for MCA component psec:munge compile mode... dso
checking will munge support be built... no
checking if MCA component psec:munge can compile... no
+++ Configuring MCA framework psensor
checking for no configure components in framework psensor... file, heartbeat
checking for m4 configure components in framework psensor...
--- MCA component psensor:file (no configuration)
checking for MCA component psensor:file compile mode... dso
checking if MCA component psensor:file can compile... yes
--- MCA component psensor:heartbeat (no configuration)
checking for MCA component psensor:heartbeat compile mode... dso
checking if MCA component psensor:heartbeat can compile... yes
+++ Configuring MCA framework pshmem
checking for no configure components in framework pshmem... mmap
checking for m4 configure components in framework pshmem...
--- MCA component pshmem:mmap (no configuration)
checking for MCA component pshmem:mmap compile mode... dso
checking if MCA component pshmem:mmap can compile... yes
+++ Configuring MCA framework ptl
checking for no configure components in framework ptl... tcp, usock
checking for m4 configure components in framework ptl...
--- MCA component ptl:tcp (no configuration)
checking for MCA component ptl:tcp compile mode... dso
checking if MCA component ptl:tcp can compile... yes
--- MCA component ptl:usock (no configuration)
checking for MCA component ptl:usock compile mode... dso
checking if MCA component ptl:usock can compile... yes
============================================================================
== Dstore Locking
============================================================================
checking for struct flock.l_type... yes
checking for pthread_rwlockattr_setkind_np... yes
checking for pthread_rwlockattr_setpshared... yes
*** Set path-related compiler flags
*** Final output
checking if gcc-5 supports __thread... yes
checking for the C compiler vendor... (cached) gnu
checking for ANSI C header files... (cached) yes
checking if gcc-5 supports -finline-functions... (cached) yes
checking if gcc-5 supports -fno-strict-aliasing... (cached) yes
configure: WARNING: -fno-strict-aliasing has been added to CFLAGS
checking if gcc-5 supports __builtin_expect... (cached) yes
checking if gcc-5 supports __builtin_prefetch... (cached) yes
checking if gcc-5 supports __builtin_clz... (cached) yes
checking for C optimization flags... -DNDEBUG -O3 -finline-functions -fno-strict-aliasing -mcx16 -pthread
============================================================================
== Final compiler flags
============================================================================
checking final CPPFLAGS... -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/pmix/pmix2x/pmix -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/pmix/pmix2x/pmix/src -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/pmix/pmix2x/pmix/include -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2 -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/include -I/tmp/open-mpi-20181005-26614-1nuxgil/openmpi-3.1.2/opal/mca/hwloc/hwloc1117/hwloc/include -I/home/abel/.linuxbrew/opt/libevent/include
checking final CFLAGS... -DNDEBUG -O3 -finline-functions -fno-strict-aliasing -mcx16 -pthread
checking final LDFLAGS...
checking final LIBS... -lm -lz -ldl
============================================================================
== Configuration complete
============================================================================
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating include/pmix_version.h
config.status: creating include/pmix_rename.h
config.status: creating src/mca/bfrops/Makefile
config.status: creating src/mca/bfrops/v12/Makefile
config.status: creating src/mca/bfrops/v20/Makefile
config.status: creating src/mca/bfrops/v21/Makefile
config.status: creating src/mca/gds/Makefile
config.status: creating src/mca/gds/ds12/Makefile
config.status: creating src/mca/gds/hash/Makefile
config.status: creating src/mca/pdl/Makefile
config.status: creating src/mca/pdl/pdlopen/Makefile
config.status: creating src/mca/pdl/plibltdl/Makefile
config.status: creating src/mca/pif/Makefile
config.status: creating src/mca/pif/bsdx_ipv4/Makefile
config.status: creating src/mca/pif/bsdx_ipv6/Makefile
config.status: creating src/mca/pif/linux_ipv6/Makefile
config.status: creating src/mca/pif/posix_ipv4/Makefile
config.status: creating src/mca/pif/solaris_ipv6/Makefile
config.status: creating src/mca/pinstalldirs/Makefile
config.status: creating src/mca/pinstalldirs/env/Makefile
config.status: creating src/mca/pinstalldirs/config/Makefile
config.status: creating src/mca/pinstalldirs/config/pinstall_dirs.h
config.status: creating src/mca/pnet/Makefile
config.status: creating src/mca/pnet/opa/Makefile
config.status: creating src/mca/preg/Makefile
config.status: creating src/mca/preg/native/Makefile
config.status: creating src/mca/psec/Makefile
config.status: creating src/mca/psec/native/Makefile
config.status: creating src/mca/psec/none/Makefile
config.status: creating src/mca/psec/munge/Makefile
config.status: creating src/mca/psensor/Makefile
config.status: creating src/mca/psensor/file/Makefile
config.status: creating src/mca/psensor/heartbeat/Makefile
config.status: creating src/mca/pshmem/Makefile
config.status: creating src/mca/pshmem/mmap/Makefile
config.status: creating src/mca/ptl/Makefile
config.status: creating src/mca/ptl/tcp/Makefile
config.status: creating src/mca/ptl/usock/Makefile
config.status: creating Makefile
config.status: creating config/Makefile
config.status: creating etc/Makefile
config.status: creating include/Makefile
config.status: creating src/Makefile
config.status: creating src/util/keyval/Makefile
config.status: creating src/mca/base/Makefile
config.status: creating contrib/Makefile
config.status: creating examples/Makefile
config.status: creating man/Makefile
config.status: creating test/Makefile
config.status: creating test/simple/Makefile
config.status: creating src/include/pmix_config.h
config.status: creating include/pmix_common.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: /bin/sh './configure' succeeded for opal/mca/pmix/pmix2x/pmix
checking if v2.x component is to be used... yes - using the internal v2.x library
checking PMIx extra wrapper CPPFLAGS...
checking PMIx extra wrapper LDFLAGS...
checking PMIx extra wrapper LIBS... -lz
checking if MCA component pmix:pmix2x can compile... yes
--- MCA component pmix:s1 (m4 configuration macro)
checking for MCA component pmix:s1 compile mode... dso
checking if MCA component pmix:s1 can compile... no
--- MCA component pmix:s2 (m4 configuration macro)
checking for MCA component pmix:s2 compile mode... dso
checking if MCA component pmix:s2 can compile... no
+++ Configuring MCA framework pstat
checking for no configure components in framework pstat...
checking for m4 configure components in framework pstat... linux, test
--- MCA component pstat:linux (m4 configuration macro, priority 60)
checking for MCA component pstat:linux compile mode... dso
checking whether HZ is declared... yes
checking if MCA component pstat:linux can compile... yes
--- MCA component pstat:test (m4 configuration macro, priority 10)
checking for MCA component pstat:test compile mode... dso
checking if MCA component pstat:test can compile... no
+++ Configuring MCA framework rcache
checking for no configure components in framework rcache... grdma
checking for m4 configure components in framework rcache... gpusm, rgpusm, udreg
--- MCA component rcache:grdma (no configuration)
checking for MCA component rcache:grdma compile mode... dso
checking if MCA component rcache:grdma can compile... yes
--- MCA component rcache:gpusm (m4 configuration macro)
checking for MCA component rcache:gpusm compile mode... dso
checking if MCA component rcache:gpusm can compile... no
--- MCA component rcache:rgpusm (m4 configuration macro)
checking for MCA component rcache:rgpusm compile mode... dso
checking if MCA component rcache:rgpusm can compile... no
--- MCA component rcache:udreg (m4 configuration macro)
checking for MCA component rcache:udreg compile mode... dso
checking for CRAY_UDREG... no
no
checking if MCA component rcache:udreg can compile... no
+++ Configuring MCA framework reachable
checking for no configure components in framework reachable... weighted
checking for m4 configure components in framework reachable... netlink
--- MCA component reachable:weighted (no configuration)
checking for MCA component reachable:weighted compile mode... dso
checking if MCA component reachable:weighted can compile... yes
--- MCA component reachable:netlink (m4 configuration macro)
checking for MCA component reachable:netlink compile mode... dso
checking for linux/netlink.h... yes
configure: checking for libnl v3
checking for /usr/include/libnl3... found
checking netlink/version.h usability... yes
checking netlink/version.h presence... yes
checking for netlink/version.h... yes
looking for library without search path
checking for library containing nl_recvmsgs_report... -lnl-3
checking if libnl-3 requires libnl v1 or v3... v3
checking for library containing nl_rtgen_request... -lnl-route-3
checking to ensure these really are libnl v3 headers... yes
checking if MCA component reachable:netlink can compile... yes
+++ Configuring MCA framework shmem
checking for no configure components in framework shmem...
checking for m4 configure components in framework shmem... mmap, posix, sysv
--- MCA component shmem:mmap (m4 configuration macro)
checking for MCA component shmem:mmap compile mode... dso
checking if want mmap shared memory support... yes
checking for library containing mmap... none required
checking if MCA component shmem:mmap can compile... yes
--- MCA component shmem:posix (m4 configuration macro)
checking for MCA component shmem:posix compile mode... dso
checking if want POSIX shared memory support... yes
checking for library containing shm_open... -lrt
checking if MCA component shmem:posix can compile... yes
--- MCA component shmem:sysv (m4 configuration macro)
checking for MCA component shmem:sysv compile mode... dso
checking if want SYSV shared memory support... yes
checking for shmget... yes
checking if MCA component shmem:sysv can compile... yes
+++ Configuring MCA framework timer
checking for no configure components in framework timer...
checking for m4 configure components in framework timer... altix, darwin, linux, solaris
--- MCA component timer:altix (m4 configuration macro, priority 100)
checking for MCA component timer:altix compile mode... static
checking sn/mmtimer.h usability... no
checking sn/mmtimer.h presence... no
checking for sn/mmtimer.h... no
checking if MCA component timer:altix can compile... no
--- MCA component timer:darwin (m4 configuration macro, priority 30)
checking for MCA component timer:darwin compile mode... static
checking mach/mach_time.h usability... no
checking mach/mach_time.h presence... no
checking for mach/mach_time.h... no
checking for mach_absolute_time... no
checking if MCA component timer:darwin can compile... no
--- MCA component timer:linux (m4 configuration macro, priority 30)
checking for MCA component timer:linux compile mode... static
checking if MCA component timer:linux can compile... yes
--- MCA component timer:solaris (m4 configuration macro, priority 30)
checking for MCA component timer:solaris compile mode... static
checking for gethrtime... no
checking if MCA component timer:solaris can compile... no
*** Configuring MCA for orte
checking for frameworks for orte... common, dfs, errmgr, ess, filem, grpcomm, iof, notifier, odls, oob, plm, ras, regx, rmaps, rml, routed, rtc, schizo, snapc, sstore, state
+++ Configuring MCA framework common
checking for no configure components in framework common...
checking for m4 configure components in framework common... alps
--- MCA component common:alps (m4 configuration macro)
checking for MCA component common:alps compile mode... dso
checking if MCA component common:alps can compile... no
+++ Configuring MCA framework dfs
checking for no configure components in framework dfs... app, orted, test
checking for m4 configure components in framework dfs...
--- MCA component dfs:app (no configuration)
checking for MCA component dfs:app compile mode... dso
checking if MCA component dfs:app can compile... yes
--- MCA component dfs:orted (no configuration)
checking for MCA component dfs:orted compile mode... dso
checking if MCA component dfs:orted can compile... yes
--- MCA component dfs:test (no configuration)
checking for MCA component dfs:test compile mode... dso
checking if MCA component dfs:test can compile... yes
+++ Configuring MCA framework errmgr
checking for no configure components in framework errmgr... default_app, default_hnp, default_orted, default_tool, dvm
checking for m4 configure components in framework errmgr...
--- MCA component errmgr:default_app (no configuration)
checking for MCA component errmgr:default_app compile mode... dso
checking if MCA component errmgr:default_app can compile... yes
--- MCA component errmgr:default_hnp (no configuration)
checking for MCA component errmgr:default_hnp compile mode... dso
checking if MCA component errmgr:default_hnp can compile... yes
--- MCA component errmgr:default_orted (no configuration)
checking for MCA component errmgr:default_orted compile mode... dso
checking if MCA component errmgr:default_orted can compile... yes
--- MCA component errmgr:default_tool (no configuration)
checking for MCA component errmgr:default_tool compile mode... dso
checking if MCA component errmgr:default_tool can compile... yes
--- MCA component errmgr:dvm (no configuration)
checking for MCA component errmgr:dvm compile mode... dso
checking if MCA component errmgr:dvm can compile... yes
+++ Configuring MCA framework ess
checking for no configure components in framework ess... env, hnp, pmi, singleton, tool
checking for m4 configure components in framework ess... alps, lsf, slurm, tm
--- MCA component ess:env (no configuration)
checking for MCA component ess:env compile mode... dso
checking if MCA component ess:env can compile... yes
--- MCA component ess:hnp (no configuration)
checking for MCA component ess:hnp compile mode... dso
checking if MCA component ess:hnp can compile... yes
--- MCA component ess:pmi (no configuration)
checking for MCA component ess:pmi compile mode... dso
checking if MCA component ess:pmi can compile... yes
--- MCA component ess:singleton (no configuration)
checking for MCA component ess:singleton compile mode... dso
checking if MCA component ess:singleton can compile... yes
--- MCA component ess:tool (no configuration)
checking for MCA component ess:tool compile mode... dso
checking if MCA component ess:tool can compile... yes
--- MCA component ess:alps (m4 configuration macro)
checking for MCA component ess:alps compile mode... dso
checking if MCA component ess:alps can compile... no
--- MCA component ess:lsf (m4 configuration macro)
checking for MCA component ess:lsf compile mode... dso
checking --with-lsf value... simple ok (unspecified value)
checking --with-lsf-libdir value... simple ok (unspecified value)
checking for library containing yp_all... -lnsl
checking lsf/lsf.h usability... no
checking lsf/lsf.h presence... no
checking for lsf/lsf.h... no
checking if MCA component ess:lsf can compile... no
--- MCA component ess:slurm (m4 configuration macro)
checking for MCA component ess:slurm compile mode... dso
checking for fork... (cached) yes
checking for execve... (cached) yes
checking for setpgid... (cached) yes
checking if MCA component ess:slurm can compile... yes
--- MCA component ess:tm (m4 configuration macro)
checking for MCA component ess:tm compile mode... dso
checking --with-tm value... simple ok (unspecified value)
checking for pbs-config... not found
checking tm.h usability... no
checking tm.h presence... no
checking for tm.h... no
checking if MCA component ess:tm can compile... no
+++ Configuring MCA framework filem
checking for no configure components in framework filem... raw
checking for m4 configure components in framework filem...
--- MCA component filem:raw (no configuration)
checking for MCA component filem:raw compile mode... dso
checking if MCA component filem:raw can compile... yes
+++ Configuring MCA framework grpcomm
checking for no configure components in framework grpcomm... direct
checking for m4 configure components in framework grpcomm...
--- MCA component grpcomm:direct (no configuration)
checking for MCA component grpcomm:direct compile mode... dso
checking if MCA component grpcomm:direct can compile... yes
+++ Configuring MCA framework iof
checking for no configure components in framework iof... hnp, orted, tool
checking for m4 configure components in framework iof...
--- MCA component iof:hnp (no configuration)
checking for MCA component iof:hnp compile mode... dso
checking if MCA component iof:hnp can compile... yes
--- MCA component iof:orted (no configuration)
checking for MCA component iof:orted compile mode... dso
checking if MCA component iof:orted can compile... yes
--- MCA component iof:tool (no configuration)
checking for MCA component iof:tool compile mode... dso
checking if MCA component iof:tool can compile... yes
+++ Configuring MCA framework notifier
checking for no configure components in framework notifier...
checking for m4 configure components in framework notifier... syslog
--- MCA component notifier:syslog (m4 configuration macro)
checking for MCA component notifier:syslog compile mode... dso
checking for syslog.h... (cached) yes
checking if MCA component notifier:syslog can compile... yes
+++ Configuring MCA framework odls
checking for no configure components in framework odls...
checking for m4 configure components in framework odls... alps, default
--- MCA component odls:alps (m4 configuration macro)
checking for MCA component odls:alps compile mode... dso
checking if MCA component odls:alps can compile... no
--- MCA component odls:default (m4 configuration macro)
checking for MCA component odls:default compile mode... dso
checking for fork... (cached) yes
checking if MCA component odls:default can compile... yes
+++ Configuring MCA framework oob
checking for no configure components in framework oob...
checking for m4 configure components in framework oob... alps, tcp, ud
--- MCA component oob:alps (m4 configuration macro)
checking for MCA component oob:alps compile mode... dso
checking if MCA component oob:alps can compile... no
--- MCA component oob:tcp (m4 configuration macro)
checking for MCA component oob:tcp compile mode... dso
checking for struct sockaddr_in... (cached) yes
checking if MCA component oob:tcp can compile... yes
--- MCA component oob:ud (m4 configuration macro)
checking for MCA component oob:ud compile mode... dso
checking infiniband/verbs.h usability... no
checking infiniband/verbs.h presence... no
checking for infiniband/verbs.h... no
checking if MCA component oob:ud can compile... no
+++ Configuring MCA framework plm
checking for no configure components in framework plm...
checking for m4 configure components in framework plm... alps, isolated, lsf, rsh, slurm, tm
--- MCA component plm:alps (m4 configuration macro)
checking for MCA component plm:alps compile mode... dso
checking if MCA component plm:alps can compile... no
--- MCA component plm:isolated (m4 configuration macro)
checking for MCA component plm:isolated compile mode... dso
checking for fork... (cached) yes
checking if MCA component plm:isolated can compile... yes
--- MCA component plm:lsf (m4 configuration macro)
checking for MCA component plm:lsf compile mode... dso
checking if MCA component plm:lsf can compile... no
--- MCA component plm:rsh (m4 configuration macro)
checking for MCA component plm:rsh compile mode... dso
checking for fork... (cached) yes
checking if MCA component plm:rsh can compile... yes
--- MCA component plm:slurm (m4 configuration macro)
checking for MCA component plm:slurm compile mode... dso
checking if MCA component plm:slurm can compile... yes
--- MCA component plm:tm (m4 configuration macro)
checking for MCA component plm:tm compile mode... dso
checking if MCA component plm:tm can compile... no
+++ Configuring MCA framework ras
checking for no configure components in framework ras... simulator
checking for m4 configure components in framework ras... alps, gridengine, lsf, slurm, tm
--- MCA component ras:simulator (no configuration)
checking for MCA component ras:simulator compile mode... dso
checking if MCA component ras:simulator can compile... yes
--- MCA component ras:alps (m4 configuration macro)
checking for MCA component ras:alps compile mode... dso
checking alps/apInfo.h usability... no
checking alps/apInfo.h presence... no
checking for alps/apInfo.h... no
checking if MCA component ras:alps can compile... no
--- MCA component ras:gridengine (m4 configuration macro)
checking for MCA component ras:gridengine compile mode... dso
checking if user requested SGE build... yes
checking if MCA component ras:gridengine can compile... yes
--- MCA component ras:lsf (m4 configuration macro)
checking for MCA component ras:lsf compile mode... dso
checking if MCA component ras:lsf can compile... no
--- MCA component ras:slurm (m4 configuration macro)
checking for MCA component ras:slurm compile mode... dso
checking if MCA component ras:slurm can compile... yes
--- MCA component ras:tm (m4 configuration macro)
checking for MCA component ras:tm compile mode... dso
checking if MCA component ras:tm can compile... no
+++ Configuring MCA framework regx
checking for no configure components in framework regx... fwd, reverse
checking for m4 configure components in framework regx...
--- MCA component regx:fwd (no configuration)
checking for MCA component regx:fwd compile mode... dso
checking if MCA component regx:fwd can compile... yes
--- MCA component regx:reverse (no configuration)
checking for MCA component regx:reverse compile mode... dso
checking if MCA component regx:reverse can compile... yes
+++ Configuring MCA framework rmaps
checking for no configure components in framework rmaps... mindist, ppr, rank_file, resilient, round_robin, seq
checking for m4 configure components in framework rmaps...
--- MCA component rmaps:mindist (no configuration)
checking for MCA component rmaps:mindist compile mode... dso
checking if MCA component rmaps:mindist can compile... yes
--- MCA component rmaps:ppr (no configuration)
checking for MCA component rmaps:ppr compile mode... dso
checking if MCA component rmaps:ppr can compile... yes
--- MCA component rmaps:rank_file (no configuration)
checking for MCA component rmaps:rank_file compile mode... dso
checking if MCA component rmaps:rank_file can compile... yes
--- MCA component rmaps:resilient (no configuration)
checking for MCA component rmaps:resilient compile mode... dso
checking if MCA component rmaps:resilient can compile... yes
--- MCA component rmaps:round_robin (no configuration)
checking for MCA component rmaps:round_robin compile mode... dso
checking if MCA component rmaps:round_robin can compile... yes
--- MCA component rmaps:seq (no configuration)
checking for MCA component rmaps:seq compile mode... dso
checking if MCA component rmaps:seq can compile... yes
+++ Configuring MCA framework rml
checking for no configure components in framework rml... oob
checking for m4 configure components in framework rml... ofi
--- MCA component rml:oob (no configuration)
checking for MCA component rml:oob compile mode... dso
checking if MCA component rml:oob can compile... yes
--- MCA component rml:ofi (m4 configuration macro)
checking for MCA component rml:ofi compile mode... dso
checking if MCA component rml:ofi can compile... no
+++ Configuring MCA framework routed
checking for no configure components in framework routed... binomial, debruijn, direct, radix
checking for m4 configure components in framework routed...
--- MCA component routed:binomial (no configuration)
checking for MCA component routed:binomial compile mode... dso
checking if MCA component routed:binomial can compile... yes
--- MCA component routed:debruijn (no configuration)
checking for MCA component routed:debruijn compile mode... dso
checking if MCA component routed:debruijn can compile... yes
--- MCA component routed:direct (no configuration)
checking for MCA component routed:direct compile mode... dso
checking if MCA component routed:direct can compile... yes
--- MCA component routed:radix (no configuration)
checking for MCA component routed:radix compile mode... dso
checking if MCA component routed:radix can compile... yes
+++ Configuring MCA framework rtc
checking for no configure components in framework rtc... hwloc
checking for m4 configure components in framework rtc...
--- MCA component rtc:hwloc (no configuration)
checking for MCA component rtc:hwloc compile mode... dso
checking if MCA component rtc:hwloc can compile... yes
+++ Configuring MCA framework schizo
checking for no configure components in framework schizo... flux, ompi, orte
checking for m4 configure components in framework schizo... alps, moab, singularity, slurm
--- MCA component schizo:flux (no configuration)
checking for MCA component schizo:flux compile mode... dso
checking if MCA component schizo:flux can compile... yes
--- MCA component schizo:ompi (no configuration)
checking for MCA component schizo:ompi compile mode... dso
checking if MCA component schizo:ompi can compile... yes
--- MCA component schizo:orte (no configuration)
checking for MCA component schizo:orte compile mode... dso
checking if MCA component schizo:orte can compile... yes
--- MCA component schizo:alps (m4 configuration macro)
checking for MCA component schizo:alps compile mode... dso
checking for alps/apInfo.h... (cached) no
checking if MCA component schizo:alps can compile... no
--- MCA component schizo:moab (m4 configuration macro)
checking for MCA component schizo:moab compile mode... dso
checking --with-moab value... simple ok (unspecified value)
checking --with-moab-libdir value... simple ok (unspecified value)
checking looking for moab in... ()
checking mapi.h usability... no
checking mapi.h presence... no
checking for mapi.h... no
checking if MCA component schizo:moab can compile... no
--- MCA component schizo:singularity (m4 configuration macro)
checking for MCA component schizo:singularity compile mode... dso
checking if Singularity support is to be built... yes
checking for singularity... no
checking if MCA component schizo:singularity can compile... no
--- MCA component schizo:slurm (m4 configuration macro)
checking for MCA component schizo:slurm compile mode... dso
checking if MCA component schizo:slurm can compile... yes
+++ Configuring MCA framework snapc
checking for no configure components in framework snapc...
checking for m4 configure components in framework snapc... full
--- MCA component snapc:full (m4 configuration macro)
checking for MCA component snapc:full compile mode... dso
checking if MCA component snapc:full can compile... no
+++ Configuring MCA framework sstore
checking for no configure components in framework sstore...
checking for m4 configure components in framework sstore... central, stage
--- MCA component sstore:central (m4 configuration macro)
checking for MCA component sstore:central compile mode... dso
checking if MCA component sstore:central can compile... no
--- MCA component sstore:stage (m4 configuration macro)
checking for MCA component sstore:stage compile mode... dso
checking if MCA component sstore:stage can compile... no
+++ Configuring MCA framework state
checking for no configure components in framework state... app, dvm, hnp, novm, orted, tool
checking for m4 configure components in framework state...
--- MCA component state:app (no configuration)
checking for MCA component state:app compile mode... dso
checking if MCA component state:app can compile... yes
--- MCA component state:dvm (no configuration)
checking for MCA component state:dvm compile mode... dso
checking if MCA component state:dvm can compile... yes
--- MCA component state:hnp (no configuration)
checking for MCA component state:hnp compile mode... dso
checking if MCA component state:hnp can compile... yes
--- MCA component state:novm (no configuration)
checking for MCA component state:novm compile mode... dso
checking if MCA component state:novm can compile... yes
--- MCA component state:orted (no configuration)
checking for MCA component state:orted compile mode... dso
checking if MCA component state:orted can compile... yes
--- MCA component state:tool (no configuration)
checking for MCA component state:tool compile mode... dso
checking if MCA component state:tool can compile... yes
*** Configuring MCA for ompi
checking for frameworks for ompi... common, bml, coll, crcp, fbtl, fcoll, fs, hook, io, mtl, op, osc, pml, rte, sharedfp, topo, vprotocol
+++ Configuring MCA framework common
checking for no configure components in framework common...
checking for m4 configure components in framework common... monitoring, ompio
--- MCA component common:monitoring (m4 configuration macro)
checking for MCA component common:monitoring compile mode... dso
checking if MCA component common:monitoring can compile... yes
--- MCA component common:ompio (m4 configuration macro)
checking for MCA component common:ompio compile mode... dso
checking if MCA component common:ompio can compile... yes
+++ Configuring MCA framework bml
checking for no configure components in framework bml...
checking for m4 configure components in framework bml... r2
--- MCA component bml:r2 (m4 configuration macro)
checking for MCA component bml:r2 compile mode... dso
checking if MCA component bml:r2 can compile... yes
checking for index in endpoint array for tag BML... 0
+++ Configuring MCA framework coll
checking for no configure components in framework coll... basic, inter, libnbc, self, sm, spacc, sync, tuned
checking for m4 configure components in framework coll... cuda, fca, hcoll, monitoring, portals4
--- MCA component coll:basic (no configuration)
checking for MCA component coll:basic compile mode... dso
checking if MCA component coll:basic can compile... yes
--- MCA component coll:inter (no configuration)
checking for MCA component coll:inter compile mode... dso
checking if MCA component coll:inter can compile... yes
--- MCA component coll:libnbc (no configuration)
checking for MCA component coll:libnbc compile mode... dso
checking if MCA component coll:libnbc can compile... yes
--- MCA component coll:self (no configuration)
checking for MCA component coll:self compile mode... dso
checking if MCA component coll:self can compile... yes
--- MCA component coll:sm (no configuration)
checking for MCA component coll:sm compile mode... dso
checking if MCA component coll:sm can compile... yes
--- MCA component coll:spacc (no configuration)
checking for MCA component coll:spacc compile mode... dso
checking if MCA component coll:spacc can compile... yes
--- MCA component coll:sync (no configuration)
checking for MCA component coll:sync compile mode... dso
checking if MCA component coll:sync can compile... yes
--- MCA component coll:tuned (no configuration)
checking for MCA component coll:tuned compile mode... dso
checking if MCA component coll:tuned can compile... yes
--- MCA component coll:cuda (m4 configuration macro)