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afgane/gist:69fd9c0d2a98e42f0e38

Created May 6, 2015 16:37
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gistfile1.txt
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galaxy.queue_worker INFO 2015-05-06 16:33:13,705 Binding and starting galaxy control worker for main
Starting server in PID 3058.
serving on http://127.0.0.1:8080
galaxy.jobs.runners.drmaa DEBUG 2015-05-06 16:33:13,898 (114/115) state change: job finished, but failed
galaxy.jobs.runners.slurm WARNING 2015-05-06 16:33:13,942 (114/115) Job not found, assuming job check exceeded MinJobAge and completing as successful
galaxy.datatypes.metadata DEBUG 2015-05-06 16:33:14,202 setting metadata externally failed for HistoryDatasetAssociation 117: External set_meta() not called
[bam_index_core] the alignment is not sorted (ERR030882.10002135): 3053935 > 3053755 in 25-th chr
[bam_index_build2] fail to index the BAM file.
*** Error in `python': double free or corruption (out): 0x00007faff008e9b0 ***
Aborted (core dumped)
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