Skip to content

Instantly share code, notes, and snippets.

@akkornel

akkornel/bootstrap.def Secret

Last active April 16, 2017 22:31
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
Star You must be signed in to star a gist
Embed
What would you like to do?
Learn more about clone URLs
Download ZIP
Adding code to install the workflow software
Raw
bootstrap.def
# vim: ts=4 sw=4 noet
# Stanford Quake Lab bufferbox workflow container bootstrap
BootStrap: yum
OSVersion: 7
MirrorURL: http://yum.stanford.edu/mrepo/centos%{OSVERSION}-x86_64/RPMS.all/
GPG: https://www.centos.org/keys/RPM-GPG-KEY-CentOS-7
Include: perl
%setup
echo 'Downloading the workflow software...'
curl -o ${SINGULARITY_ROOTFS}/tmp/quake-bufferbox-workflow.zip 'https://code.stanford.edu/research-computing-public/quake-bufferbox-workflow/repository/archive.zip?ref=release%2F1'
%post
echo 'Unpacking and moving workflow software...'
mkdir /workflow
unzip /tmp/quake-bufferbox-workflow.zip
mv quake-bufferbox-workflow-release*/* /workflow/
echo 'Removing workflow archive...'
rmdir quake-bufferbox-workflow-release*
rm /tmp/quake-bufferbox-workflow.zip
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment