Created
January 29, 2018 15:47
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| PUT case_centric | |
| { | |
| "mappings": { | |
| "case_centric": { | |
| "_all": { | |
| "enabled": false | |
| }, | |
| "_source": { | |
| "excludes": [ | |
| "gene.*" | |
| ] | |
| }, | |
| "properties": { | |
| "available_variation_data": { | |
| "type": "keyword" | |
| }, | |
| "case_autocomplete": { | |
| "type": "keyword", | |
| "fields": { | |
| "analyzed": { | |
| "type": "text", | |
| "analyzer": "autocomplete_analyzed", | |
| "search_analyzer": "lowercase_keyword" | |
| }, | |
| "lowercase": { | |
| "type": "text", | |
| "analyzer": "lowercase_keyword" | |
| }, | |
| "prefix": { | |
| "type": "text", | |
| "analyzer": "autocomplete_prefix", | |
| "search_analyzer": "lowercase_keyword" | |
| } | |
| } | |
| }, | |
| "case_id": { | |
| "type": "keyword", | |
| "copy_to": [ | |
| "case_autocomplete" | |
| ] | |
| }, | |
| "created_datetime": { | |
| "type": "date" | |
| }, | |
| "days_to_index": { | |
| "type": "long" | |
| }, | |
| "demographic": { | |
| "properties": { | |
| "created_datetime": { | |
| "type": "date" | |
| }, | |
| "demographic_id": { | |
| "type": "keyword" | |
| }, | |
| "ethnicity": { | |
| "type": "keyword" | |
| }, | |
| "gender": { | |
| "type": "keyword" | |
| }, | |
| "race": { | |
| "type": "keyword" | |
| }, | |
| "state": { | |
| "type": "keyword" | |
| }, | |
| "submitter_id": { | |
| "type": "keyword" | |
| }, | |
| "updated_datetime": { | |
| "type": "date" | |
| }, | |
| "year_of_birth": { | |
| "type": "long" | |
| }, | |
| "year_of_death": { | |
| "type": "long" | |
| } | |
| } | |
| }, | |
| "diagnoses": { | |
| "type": "nested", | |
| "properties": { | |
| "age_at_diagnosis": { | |
| "type": "long" | |
| }, | |
| "ajcc_clinical_m": { | |
| "type": "keyword" | |
| }, | |
| "ajcc_clinical_n": { | |
| "type": "keyword" | |
| }, | |
| "ajcc_clinical_stage": { | |
| "type": "keyword" | |
| }, | |
| "ajcc_clinical_t": { | |
| "type": "keyword" | |
| }, | |
| "ajcc_pathologic_m": { | |
| "type": "keyword" | |
| }, | |
| "ajcc_pathologic_n": { | |
| "type": "keyword" | |
| }, | |
| "ajcc_pathologic_stage": { | |
| "type": "keyword" | |
| }, | |
| "ajcc_pathologic_t": { | |
| "type": "keyword" | |
| }, | |
| "ann_arbor_b_symptoms": { | |
| "type": "keyword" | |
| }, | |
| "ann_arbor_clinical_stage": { | |
| "type": "keyword" | |
| }, | |
| "ann_arbor_extranodal_involvement": { | |
| "type": "keyword" | |
| }, | |
| "ann_arbor_pathologic_stage": { | |
| "type": "keyword" | |
| }, | |
| "burkitt_lymphoma_clinical_variant": { | |
| "type": "keyword" | |
| }, | |
| "cause_of_death": { | |
| "type": "keyword" | |
| }, | |
| "circumferential_resection_margin": { | |
| "type": "long" | |
| }, | |
| "classification_of_tumor": { | |
| "type": "keyword" | |
| }, | |
| "colon_polyps_history": { | |
| "type": "keyword" | |
| }, | |
| "created_datetime": { | |
| "type": "date" | |
| }, | |
| "days_to_birth": { | |
| "type": "long" | |
| }, | |
| "days_to_death": { | |
| "type": "long" | |
| }, | |
| "days_to_hiv_diagnosis": { | |
| "type": "long" | |
| }, | |
| "days_to_last_follow_up": { | |
| "type": "long" | |
| }, | |
| "days_to_last_known_disease_status": { | |
| "type": "long" | |
| }, | |
| "days_to_new_event": { | |
| "type": "long" | |
| }, | |
| "days_to_recurrence": { | |
| "type": "long" | |
| }, | |
| "diagnosis_id": { | |
| "type": "keyword" | |
| }, | |
| "figo_stage": { | |
| "type": "keyword" | |
| }, | |
| "hiv_positive": { | |
| "type": "keyword" | |
| }, | |
| "hpv_positive_type": { | |
| "type": "keyword" | |
| }, | |
| "hpv_status": { | |
| "type": "keyword" | |
| }, | |
| "last_known_disease_status": { | |
| "type": "keyword" | |
| }, | |
| "laterality": { | |
| "type": "keyword" | |
| }, | |
| "ldh_level_at_diagnosis": { | |
| "type": "long" | |
| }, | |
| "ldh_normal_range_upper": { | |
| "type": "long" | |
| }, | |
| "lymph_nodes_positive": { | |
| "type": "long" | |
| }, | |
| "lymphatic_invasion_present": { | |
| "type": "keyword" | |
| }, | |
| "method_of_diagnosis": { | |
| "type": "keyword" | |
| }, | |
| "morphology": { | |
| "type": "keyword" | |
| }, | |
| "new_event_anatomic_site": { | |
| "type": "keyword" | |
| }, | |
| "new_event_type": { | |
| "type": "keyword" | |
| }, | |
| "perineural_invasion_present": { | |
| "type": "keyword" | |
| }, | |
| "primary_diagnosis": { | |
| "type": "keyword" | |
| }, | |
| "prior_malignancy": { | |
| "type": "keyword" | |
| }, | |
| "prior_treatment": { | |
| "type": "keyword" | |
| }, | |
| "progression_or_recurrence": { | |
| "type": "keyword" | |
| }, | |
| "residual_disease": { | |
| "type": "keyword" | |
| }, | |
| "site_of_resection_or_biopsy": { | |
| "type": "keyword" | |
| }, | |
| "state": { | |
| "type": "keyword" | |
| }, | |
| "submitter_id": { | |
| "type": "keyword" | |
| }, | |
| "tissue_or_organ_of_origin": { | |
| "type": "keyword" | |
| }, | |
| "treatments": { | |
| "type": "nested", | |
| "properties": { | |
| "created_datetime": { | |
| "type": "date" | |
| }, | |
| "days_to_treatment": { | |
| "type": "long" | |
| }, | |
| "days_to_treatment_end": { | |
| "type": "long" | |
| }, | |
| "days_to_treatment_start": { | |
| "type": "long" | |
| }, | |
| "state": { | |
| "type": "keyword" | |
| }, | |
| "submitter_id": { | |
| "type": "keyword" | |
| }, | |
| "therapeutic_agents": { | |
| "type": "keyword" | |
| }, | |
| "treatment_anatomic_site": { | |
| "type": "keyword" | |
| }, | |
| "treatment_id": { | |
| "type": "keyword" | |
| }, | |
| "treatment_intent_type": { | |
| "type": "keyword" | |
| }, | |
| "treatment_or_therapy": { | |
| "type": "keyword" | |
| }, | |
| "treatment_outcome": { | |
| "type": "keyword" | |
| }, | |
| "treatment_type": { | |
| "type": "keyword" | |
| }, | |
| "updated_datetime": { | |
| "type": "date" | |
| } | |
| } | |
| }, | |
| "tumor_grade": { | |
| "type": "keyword" | |
| }, | |
| "tumor_stage": { | |
| "type": "keyword" | |
| }, | |
| "updated_datetime": { | |
| "type": "date" | |
| }, | |
| "vascular_invasion_present": { | |
| "type": "keyword" | |
| }, | |
| "vital_status": { | |
| "type": "keyword" | |
| }, | |
| "year_of_diagnosis": { | |
| "type": "long" | |
| } | |
| } | |
| }, | |
| "disease_type": { | |
| "type": "keyword", | |
| "copy_to": [ | |
| "case_autocomplete" | |
| ] | |
| }, | |
| "exposures": { | |
| "type": "nested", | |
| "properties": { | |
| "alcohol_history": { | |
| "type": "keyword" | |
| }, | |
| "alcohol_intensity": { | |
| "type": "keyword" | |
| }, | |
| "bmi": { | |
| "type": "float" | |
| }, | |
| "cigarettes_per_day": { | |
| "type": "float" | |
| }, | |
| "created_datetime": { | |
| "type": "date" | |
| }, | |
| "exposure_id": { | |
| "type": "keyword" | |
| }, | |
| "height": { | |
| "type": "float" | |
| }, | |
| "pack_years_smoked": { | |
| "type": "long" | |
| }, | |
| "state": { | |
| "type": "keyword" | |
| }, | |
| "submitter_id": { | |
| "type": "keyword" | |
| }, | |
| "tobacco_smoking_onset_year": { | |
| "type": "long" | |
| }, | |
| "tobacco_smoking_quit_year": { | |
| "type": "long" | |
| }, | |
| "tobacco_smoking_status": { | |
| "type": "keyword" | |
| }, | |
| "updated_datetime": { | |
| "type": "date" | |
| }, | |
| "weight": { | |
| "type": "float" | |
| }, | |
| "years_smoked": { | |
| "type": "float" | |
| } | |
| } | |
| }, | |
| "family_histories": { | |
| "type": "nested", | |
| "properties": { | |
| "created_datetime": { | |
| "type": "date" | |
| }, | |
| "family_history_id": { | |
| "type": "keyword" | |
| }, | |
| "relationship_age_at_diagnosis": { | |
| "type": "long" | |
| }, | |
| "relationship_gender": { | |
| "type": "keyword" | |
| }, | |
| "relationship_primary_diagnosis": { | |
| "type": "keyword" | |
| }, | |
| "relationship_type": { | |
| "type": "keyword" | |
| }, | |
| "relative_with_cancer_history": { | |
| "type": "keyword" | |
| }, | |
| "state": { | |
| "type": "keyword" | |
| }, | |
| "submitter_id": { | |
| "type": "keyword" | |
| }, | |
| "updated_datetime": { | |
| "type": "date" | |
| } | |
| } | |
| }, | |
| "gene": { | |
| "type": "nested", | |
| "properties": { | |
| "biotype": { | |
| "type": "keyword" | |
| }, | |
| "canonical_transcript_id": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "cytoband": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "description": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "external_db_ids": { | |
| "properties": { | |
| "entrez_gene": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "hgnc": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "omim_gene": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "uniprotkb_swissprot": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| } | |
| } | |
| }, | |
| "gene_chromosome": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "gene_end": { | |
| "type": "long" | |
| }, | |
| "gene_id": { | |
| "type": "keyword" | |
| }, | |
| "gene_start": { | |
| "type": "long" | |
| }, | |
| "gene_strand": { | |
| "type": "long" | |
| }, | |
| "is_cancer_gene_census": { | |
| "type": "boolean" | |
| }, | |
| "name": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "ssm": { | |
| "type": "nested", | |
| "properties": { | |
| "chromosome": { | |
| "type": "keyword" | |
| }, | |
| "consequence": { | |
| "type": "nested", | |
| "properties": { | |
| "consequence_id": { | |
| "type": "keyword" | |
| }, | |
| "transcript": { | |
| "properties": { | |
| "aa_change": { | |
| "type": "keyword" | |
| }, | |
| "annotation": { | |
| "properties": { | |
| "amino_acids": { | |
| "type": "keyword" | |
| }, | |
| "ccds": { | |
| "type": "keyword" | |
| }, | |
| "cdna_position": { | |
| "type": "keyword" | |
| }, | |
| "cds_end": { | |
| "type": "long" | |
| }, | |
| "cds_length": { | |
| "type": "long" | |
| }, | |
| "cds_position": { | |
| "type": "keyword" | |
| }, | |
| "cds_start": { | |
| "type": "long" | |
| }, | |
| "clin_sig": { | |
| "type": "keyword" | |
| }, | |
| "codons": { | |
| "type": "keyword" | |
| }, | |
| "dbsnp_rs": { | |
| "type": "keyword" | |
| }, | |
| "dbsnp_val_status": { | |
| "type": "keyword" | |
| }, | |
| "domains": { | |
| "type": "keyword" | |
| }, | |
| "ensp": { | |
| "type": "keyword" | |
| }, | |
| "existing_variation": { | |
| "type": "keyword" | |
| }, | |
| "hgvsc": { | |
| "type": "keyword" | |
| }, | |
| "hgvsp": { | |
| "type": "keyword" | |
| }, | |
| "hgvsp_short": { | |
| "type": "keyword" | |
| }, | |
| "impact": { | |
| "type": "keyword" | |
| }, | |
| "polyphen": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "polyphen_impact": { | |
| "type": "keyword" | |
| }, | |
| "polyphen_score": { | |
| "type": "float" | |
| }, | |
| "protein_position": { | |
| "type": "keyword" | |
| }, | |
| "pubmed": { | |
| "type": "keyword" | |
| }, | |
| "sift": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "sift_impact": { | |
| "type": "keyword" | |
| }, | |
| "sift_score": { | |
| "type": "float" | |
| }, | |
| "swissprot": { | |
| "type": "keyword" | |
| }, | |
| "transcript_id": { | |
| "type": "keyword" | |
| }, | |
| "trembl": { | |
| "type": "keyword" | |
| }, | |
| "uniparc": { | |
| "type": "keyword" | |
| } | |
| } | |
| }, | |
| "consequence_type": { | |
| "type": "keyword" | |
| }, | |
| "ref_seq_accession": { | |
| "type": "keyword" | |
| }, | |
| "transcript_id": { | |
| "type": "keyword" | |
| } | |
| } | |
| } | |
| } | |
| }, | |
| "cosmic_id": { | |
| "type": "keyword" | |
| }, | |
| "end_position": { | |
| "type": "long" | |
| }, | |
| "genomic_dna_change": { | |
| "type": "keyword" | |
| }, | |
| "mutation_subtype": { | |
| "type": "keyword" | |
| }, | |
| "mutation_type": { | |
| "type": "keyword" | |
| }, | |
| "ncbi_build": { | |
| "type": "keyword" | |
| }, | |
| "observation": { | |
| "type": "nested", | |
| "properties": { | |
| "acl": { | |
| "type": "keyword" | |
| }, | |
| "center": { | |
| "type": "keyword" | |
| }, | |
| "input_bam_file": { | |
| "properties": { | |
| "normal_bam_uuid": { | |
| "type": "keyword" | |
| }, | |
| "tumor_bam_uuid": { | |
| "type": "keyword" | |
| } | |
| } | |
| }, | |
| "mutation_status": { | |
| "type": "keyword" | |
| }, | |
| "normal_genotype": { | |
| "properties": { | |
| "match_norm_seq_allele1": { | |
| "type": "keyword" | |
| }, | |
| "match_norm_seq_allele2": { | |
| "type": "keyword" | |
| } | |
| } | |
| }, | |
| "observation_id": { | |
| "type": "keyword" | |
| }, | |
| "read_depth": { | |
| "properties": { | |
| "n_depth": { | |
| "type": "long" | |
| }, | |
| "t_alt_count": { | |
| "type": "long" | |
| }, | |
| "t_depth": { | |
| "type": "long" | |
| }, | |
| "t_ref_count": { | |
| "type": "long" | |
| } | |
| } | |
| }, | |
| "sample": { | |
| "properties": { | |
| "matched_norm_sample_barcode": { | |
| "type": "keyword" | |
| }, | |
| "matched_norm_sample_uuid": { | |
| "type": "keyword" | |
| }, | |
| "tumor_sample_barcode": { | |
| "type": "keyword" | |
| }, | |
| "tumor_sample_uuid": { | |
| "type": "keyword" | |
| } | |
| } | |
| }, | |
| "src_vcf_id": { | |
| "type": "keyword" | |
| }, | |
| "tumor_genotype": { | |
| "properties": { | |
| "tumor_seq_allele1": { | |
| "type": "keyword" | |
| }, | |
| "tumor_seq_allele2": { | |
| "type": "keyword" | |
| } | |
| } | |
| }, | |
| "validation": { | |
| "properties": { | |
| "tumor_validation_allele1": { | |
| "type": "keyword" | |
| }, | |
| "tumor_validation_allele2": { | |
| "type": "keyword" | |
| }, | |
| "validation_method": { | |
| "type": "keyword" | |
| } | |
| } | |
| }, | |
| "variant_calling": { | |
| "properties": { | |
| "variant_caller": { | |
| "type": "keyword" | |
| }, | |
| "variant_process": { | |
| "type": "keyword" | |
| } | |
| } | |
| } | |
| } | |
| }, | |
| "reference_allele": { | |
| "type": "keyword" | |
| }, | |
| "ssm_id": { | |
| "type": "keyword" | |
| }, | |
| "start_position": { | |
| "type": "long" | |
| }, | |
| "tumor_allele": { | |
| "type": "keyword" | |
| } | |
| } | |
| }, | |
| "symbol": { | |
| "type": "keyword" | |
| }, | |
| "synonyms": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "transcripts": { | |
| "properties": { | |
| "biotype": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "cdna_coding_end": { | |
| "type": "long" | |
| }, | |
| "cdna_coding_start": { | |
| "type": "long" | |
| }, | |
| "coding_region_end": { | |
| "type": "long" | |
| }, | |
| "coding_region_start": { | |
| "type": "long" | |
| }, | |
| "domains": { | |
| "properties": { | |
| "description": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "end": { | |
| "type": "long" | |
| }, | |
| "gff_source": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "hit_name": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "interpro_id": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "start": { | |
| "type": "long" | |
| } | |
| } | |
| }, | |
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| "type": "long" | |
| }, | |
| "end_exon": { | |
| "type": "long" | |
| }, | |
| "exons": { | |
| "properties": { | |
| "cdna_coding_end": { | |
| "type": "long" | |
| }, | |
| "cdna_coding_start": { | |
| "type": "long" | |
| }, | |
| "cdna_end": { | |
| "type": "long" | |
| }, | |
| "cdna_start": { | |
| "type": "long" | |
| }, | |
| "end": { | |
| "type": "long" | |
| }, | |
| "end_phase": { | |
| "type": "long" | |
| }, | |
| "genomic_coding_end": { | |
| "type": "long" | |
| }, | |
| "genomic_coding_start": { | |
| "type": "long" | |
| }, | |
| "start": { | |
| "type": "long" | |
| }, | |
| "start_phase": { | |
| "type": "long" | |
| } | |
| } | |
| }, | |
| "is_canonical": { | |
| "type": "boolean" | |
| }, | |
| "length": { | |
| "type": "long" | |
| }, | |
| "length_amino_acid": { | |
| "type": "long" | |
| }, | |
| "length_cds": { | |
| "type": "long" | |
| }, | |
| "name": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "number_of_exons": { | |
| "type": "long" | |
| }, | |
| "seq_exon_end": { | |
| "type": "long" | |
| }, | |
| "seq_exon_start": { | |
| "type": "long" | |
| }, | |
| "start": { | |
| "type": "long" | |
| }, | |
| "start_exon": { | |
| "type": "long" | |
| }, | |
| "transcript_id": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| }, | |
| "translation_id": { | |
| "type": "text", | |
| "fields": { | |
| "keyword": { | |
| "type": "keyword", | |
| "ignore_above": 256 | |
| } | |
| } | |
| } | |
| } | |
| } | |
| } | |
| }, | |
| "primary_site": { | |
| "type": "keyword", | |
| "copy_to": [ | |
| "case_autocomplete" | |
| ] | |
| }, | |
| "project": { | |
| "properties": { | |
| "dbgap_accession_number": { | |
| "type": "keyword" | |
| }, | |
| "disease_type": { | |
| "type": "keyword", | |
| "copy_to": [ | |
| "case_autocomplete" | |
| ] | |
| }, | |
| "intended_release_date": { | |
| "type": "keyword" | |
| }, | |
| "name": { | |
| "type": "keyword", | |
| "copy_to": [ | |
| "case_autocomplete" | |
| ] | |
| }, | |
| "primary_site": { | |
| "type": "keyword", | |
| "copy_to": [ | |
| "case_autocomplete" | |
| ] | |
| }, | |
| "program": { | |
| "properties": { | |
| "dbgap_accession_number": { | |
| "type": "keyword" | |
| }, | |
| "name": { | |
| "type": "keyword" | |
| }, | |
| "program_id": { | |
| "type": "keyword" | |
| } | |
| } | |
| }, | |
| "project_id": { | |
| "type": "keyword", | |
| "copy_to": [ | |
| "case_autocomplete" | |
| ] | |
| }, | |
| "releasable": { | |
| "type": "keyword" | |
| }, | |
| "released": { | |
| "type": "boolean" | |
| }, | |
| "state": { | |
| "type": "keyword" | |
| } | |
| } | |
| }, | |
| "state": { | |
| "type": "keyword" | |
| }, | |
| "submitter_id": { | |
| "type": "keyword", | |
| "copy_to": [ | |
| "case_autocomplete" | |
| ] | |
| }, | |
| "summary": { | |
| "properties": { | |
| "data_categories": { | |
| "type": "nested", | |
| "properties": { | |
| "data_category": { | |
| "type": "keyword" | |
| }, | |
| "file_count": { | |
| "type": "long" | |
| } | |
| } | |
| }, | |
| "experimental_strategies": { | |
| "type": "nested", | |
| "properties": { | |
| "experimental_strategy": { | |
| "type": "keyword" | |
| }, | |
| "file_count": { | |
| "type": "long" | |
| } | |
| } | |
| }, | |
| "file_count": { | |
| "type": "long" | |
| }, | |
| "file_size": { | |
| "type": "long" | |
| } | |
| } | |
| }, | |
| "tissue_source_site": { | |
| "properties": { | |
| "bcr_id": { | |
| "type": "keyword" | |
| }, | |
| "code": { | |
| "type": "keyword" | |
| }, | |
| "name": { | |
| "type": "keyword" | |
| }, | |
| "project": { | |
| "type": "keyword" | |
| }, | |
| "tissue_source_site_id": { | |
| "type": "keyword" | |
| } | |
| } | |
| }, | |
| "updated_datetime": { | |
| "type": "date" | |
| } | |
| } | |
| } | |
| } | |
| } |
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