Created
February 11, 2020 17:09
-
-
Save alexfoias/7a77a802cb8cea444506af07342094d9 to your computer and use it in GitHub Desktop.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
-- | |
Spinal Cord Toolbox (4.0.0) | |
SCT info: | |
- version: 4.0.0 | |
- path: /home/alex/sct_4.0.0 | |
OS: linux (Linux-3.16.0-6-amd64-x86_64-with-debian-8.11) | |
CPU cores: Available: 4, Used by SCT: 4 | |
RAM: MemTotal: 4058416 kB | |
total used free shared buffers cached | |
Mem: 3963 2547 1415 30 57 1628 | |
-/+ buffers/cache: 861 3102 | |
Swap: 879 9 870 | |
Check Python executable.............................[OK] | |
Using bundled python 3.6.10 |Anaconda, Inc.| (default, Jan 7 2020, 21:14:29) | |
[GCC 7.3.0] at /home/alex/sct_4.0.0/python/envs/venv_sct/bin/python | |
Check if data are installed.........................[OK] | |
Check if numpy is installed.........................[OK] (1.18.1) | |
Check if cryptography is installed..................[OK] (2.8) | |
Check if dipy is installed..........................[OK] (1.1.1) | |
Check if futures is installed.......................[OK] | |
Check if h5py is installed..........................[OK] (2.10.0) | |
Check if Keras is installed.........................2020-02-10 16:11:19.319744: W tensorflow/stream_executor/platform/default/dso_loader.cc:55] Could not load dynamic library 'libnvinfer.so.6'; dlerror: libnvinfer.so.6: cannot open shared object file: No such file or directory | |
2020-02-10 16:11:19.319920: W tensorflow/stream_executor/platform/default/dso_loader.cc:55] Could not load dynamic library 'libnvinfer_plugin.so.6'; dlerror: libnvinfer_plugin.so.6: cannot open shared object file: No such file or directory | |
2020-02-10 16:11:19.319944: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:30] Cannot dlopen some TensorRT libraries. If you would like to use Nvidia GPU with TensorRT, please make sure the missing libraries mentioned above are installed properly. | |
[OK] (2.3.1) | |
Check if matplotlib is installed....................[OK] (3.1.3) | |
Check if nibabel is installed.......................[OK] (3.0.1) | |
Check if pandas is installed........................[OK] (1.0.1) | |
Check if psutil is installed........................[OK] (5.6.7) | |
Check if pyqt5 is installed.........................[OK] | |
Check if raven is installed.........................[OK] | |
Check if requests is installed......................[OK] (2.22.0) | |
Check if scipy is installed.........................[OK] (1.4.1) | |
Check if scikit-image is installed..................[FAIL] | |
Check if scikit-learn is installed..................[FAIL] | |
Check if tensorflow is installed....................[OK] (2.1.0) | |
Check if spinalcordtoolbox is installed.............[OK] | |
Check ANTs compatibility with OS ...................[OK] | |
Check PropSeg compatibility with OS ................[OK] | |
Check if figure can be opened.......................[OK] | |
Installation validation Failed! | |
Please copy the historic of this Terminal (starting with the command install_sct) and paste it in the SCT Help forum (create a new discussion): | |
http://forum.spinalcordmri.org/c/sct | |
Installation failed |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment