alopezo

import pandas as pd
import json
import uuid
import tarfile
import os

# Load the Excel file
file_path = '/Users/alejandrolopezosornio/Library/Mobile Documents/com~apple~CloudDocs/Documents/2023/SNOMED/snomed-scripts/xshare/001_2024-02-23_LB and MB_contributed data to CDISC.xlsx'
excel_data = pd.ExcelFile(file_path)

alopezo

import pandas as pd
import os
import warnings

warnings.simplefilter("ignore", UserWarning)

# UPDATE ALL FILES PATHS BEFORE RUNNING THE SCRIPT

# Load map spreadsheet
map_file_path = 'Downloads/Map of Common Diseases_1.xlsx'

alopezo

from llama_cpp import Llama
import json
import time
import re
import fhir_api

# ANSI escape sequences for text colors
COLOR_RED = "\033[91m"
COLOR_GREEN = "\033[92m"
COLOR_YELLOW = "\033[93m"

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function searchInSnomed(term, module, version, ecl) {
  const config = {
    muteHttpExceptions: true
  };
  const url = `https://snowstorm.ihtsdotools.org/fhir/ValueSet/$expand?url=http://snomed.info/sct/${module}/version/${version}?fhir_vs=ecl/${encodeURIComponent(ecl)}&count=20&offset=0&filter=${term}`;
  var response = UrlFetchApp.fetch(url, config);
  let responseObject = JSON.parse(response.getBlob().getDataAsString());
  let result = "";
  if (responseObject && responseObject.expansion && responseObject.expansion.contains) {
    let firstMatch = responseObject.expansion.contains[0];

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/**
 * Created by alo on 2/20/17.
 */
var fs = require('fs'),
    byline = require('byline');

function convertDate(epoch) {
    if (epoch) {
        var myDate = new Date(epoch*1000);
        return myDate.toGMTString();

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/**
 * Created by alo on 10/15/17.
 */
var getJSON = require('get-json');
var sem = require('semaphore')(1);
var https = require('https');

getJSON('https://api.chess.com/pub/country/AR/players', function(error, response){
    if (error) {
        console.log(error);

alopezo

/*
*
* Script to modify the hierarchy of substances according to the grouper concepts and disposition values
*
* Author: Alejandro Rodriguez
*
* Requirements: 
*	- RF2 snapshot  
*	- List of corresponding grouper concepts and dispositions [grouperId	dispositionId]
*	- List of new relationship ids (~ 10000) [id	partitionId	namespace	assigned] with assigned column in 0