Gremlin test script for bulbs

gremlin-test1.groovy

def regulatory(clinicalNodeId, distanceThreshold, middleNodeType, mutatedType, targetType) {
	if( targetType == 'GNAB' )
	{
		if( mutatedType == 'aberrated' )
		{
			/*distanceThreshold = 100000;
			middleNodeType = 'GEXP';
			clinicalNodeId = 137059;
			mutatedType = 'aberrated';
			targetType = 'GNAB'; */

			middle = null;
			rel2 = null;
			resultEdgeIds = [];
			return query = g.v(clinicalNodeId).outE.filter{ it.inV.next().getProperty('source') == middleNodeType }.inV.as('middle').sideEffect{middle = it}.outE.sideEffect{rel2 = it}.inV.filter
			{
				target = it;
				return 
				( 
					( ( target.hasProperty('label') && middle.hasProperty('label') && target.getProperty('label') == middle.getProperty('label') )  && 
						( target.chr == middle.chr ) && ( middle.source == targetType ) ) ||
					( ( target.chr == middle.chr ) && ( target.source == 'CNVR' ) 
						&& ( rel2.getProperty('distance') < distanceThreshold ) && ( rel2.getProperty('correlation') > 0 ) ) ||
					( ( target.chr == middle.chr ) && ( target.source == 'METH' ) && 
						( rel2.getProperty('distance') < distanceThreshold ) && ( rel2.getProperty('correlation') < 0 ) ) ||
					( (target.source == 'MIRN') && (rel2.correlation < 0) )
				);
			}.paths.transform{ it.findAll{ it instanceof Edge} }.toList().flatten().unique();
		}
	}
}