This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
@HD VN:1.4 SO:coordinate | |
@SQ SN:1 LN:249250621 | |
@SQ SN:2 LN:243199373 | |
@SQ SN:3 LN:198022430 | |
@SQ SN:4 LN:191154276 | |
@SQ SN:5 LN:180915260 | |
@SQ SN:6 LN:171115067 | |
@SQ SN:7 LN:159138663 | |
@SQ SN:8 LN:146364022 | |
@SQ SN:9 LN:141213431 |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
@HD VN:1.4 SO:coordinate | |
@SQ SN:1 LN:249250621 | |
@RG ID:TEST PL:LS454 SM:TESTSM | |
A1 147 1 69584 0 101M = 69330 -355 ATGAGGTCGATAGTTTTTATTGTGACCTTCCTAGGGTAATCAAACTTGCCTGTACAGATACCTACAGGCTAGATATTATGGTCATTGCTAACAGTGGTGTG CA<DBDDBECAAB>DFDDFEHHHA@DGGGEGIIHHAEGIIIIHGGGGGECGGGFFGIF?CGGHDIJJIIHAIGIJIGJIJIIGEIIGIHHFGHFFFFFCCC NM:i:0 MD:Z:101 AS:i:101 XS:i:101 RG:Z:TEST | |
B1 99 1 69585 0 101M = 69759 275 TGAGGTCGATAGTTTTTATTGTGACCTTCCTAGGGTAATCAAACTTGCCTGTACAGATACCTACAGGCTAGATATTATGGTCATTGCTAACAGTGGTGTGC ?@@DD;DAACC@<CGHI=E4A:?492+AEF@FGDH9CA9*:DG3DA9*BDGI@DD8*....8BD=>@D@7@@=7ACC>ED7?)..;6;CC>@>>;A>@### NM:i:0 MD:Z:101 AS:i:101 XS:i:101 RG:Z:TEST | |
C1 83 1 69588 0 101M = 69571 -118 GGTCGATAGTTTTTATTGTGACCTTCCTAGGGTAATCAAACTTGCCTGTACAGATACCTACAGGCTAGATATTATGGTCATTGCTAACAGTGGTGTGCTCA ?;5=A>A:BCCCCCDB;DEC?;>E@;D9EC@HGC@GCIGGGGAF;CCFD9GHGHF?HFDGIHFC9GFC<F@CCHCGHDFC@IHE?<:FDFBHDDDDDD@?= NM:i:0 MD:Z:101 AS:i:101 XS:i:101 RG:Z:TEST | |
D1 163 1 69585 0 101M = 69629 145 TGAGGTCGATAGTTTTTATTGTGACCTTCCTAGGGTAATCAAACTTGCCTGTACAGATACCTACAG |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
>m54026_160803_070612/28836180/20388_33105 | |
AAATGTTAAATAGAGCAGTGGCTAAGTAAAACAAACAAACAAACAAAAACAACAGCAACAACAACAAAACAGAAAATATCAACTTCTGGTAATCATCTTAACTTGAACCAGATGTTAGAAGAAATGGATATCGGCTGGGAGTGCGGTAGCTCATGACTGTAATCCCAACTTTGGGAGGGACTGAGGCGGGTGGATCACTTGAAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGGAAAACCGGTCTCATACTAAAAATACAAAAATTAGCTGGCGGGGTGGTGTGTGCCTGTAATACCAGGACCACCTCCACACCTCAGCCTCCCAATCCCACTCCCACGTCAGCTGAGGCTGCAGTGAGCATTGAATCACACCACTTTACACCGCTGGGGGACAGAGTATAGAAACGGTCTAAAAACAACAAAAAAGAAATGGCTATCATGGATATAATGAAGAAATAAAAGTTTATTATGTATTAAAAGAATTTCATGTAAGAATTGTGCACATGAGACAAACTCCTGTAGAAAGAAAATTACCTTGAGCTAGAGAAATGAGAACTGGCTGAAATTCCTCTTTCTTATTCTCAGTGTTTGAATAATCAAAGCGGTCTTTAAATGTATAGGCGGGGCTGGGATAGCTCACCGCTTGTAATCCCACACTTTGCGAAGGCTGAGGCGGCGGATCATGAAGGGTCCAGGAGATCCGAGACCATCGGGCTTAACACCCGGTGAAACCCCCGTCTCTACTAAAAAGACAAAAAAGTAGCCGGGCGTTGTGGCGGGCAGCCTGTTAGTCCCAGCCGACTCGTGGAGGCTGAGATGGCAAAGAATGCGAGGAACCGGGAGGCGGAGCTTGCAGTGAGCGCGAATCGACCCCCCAGGGGACGCCACGGCACTCCAAGCCGTGGGCCGCGAGATGAGACTCAACGCCTCAAAAAAAAAAAAAAAAAAAAGTAAATATTTTCTTTTTGGGATAATGT |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
>1 | |
AAAGGGGGTTTCGCCATGTTGGCCATGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAG | |
CCACCGCACCCGGCCGCAGAGATAAATTTAGATAATGCATATCAAGTGCCTAGCACAGTATTTGTCACGTGGTAACAATTCAATTATGTATTTTATTCAT | |
CAGAGAAGATTCCAGGTAACTTTACCTCAAAGGGCAAAGTTTCCTCATCACTCAGGATATTCTTACAGAATTAATCATAGGCTTTGAAGGCAAAAGCAAA | |
TCAAAGGGTACAAAAATTTTACTGGTACAAAACAGAAAAAGGAGACTGACCAAAGTGGCTAGTCTGAGAGAAAAGTAGGTTCCTGGATAAGGAAATCAAG | |
CTAAGTACTTTTAAGACTAATCGTAATTCTTAAATACTATAAAAGAAACACATCGGCCAGGCTTGGCAGCTCATGCCTGTAATCCCAGCACTTTGGGAGG | |
CCGAGGCAGGAAGATCACCTGATGTCGAGAGTTCAAGACCAGCCTGGCCAACATGGCAAAACCCCATCTCTACTAAAAAATACAAAAATTACCCAGGCAT | |
GGTGGCAGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGGAGAATTGTTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATCTCACCAC | |
TGCACTACAGACTGGGTGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAACACATCAAAAATCTTTTTAAAAATTTCTCCTATCTGTTCAATTTC | |
TTGAGACTGAAACAAAATAAAATGTTATTACAAGTAAGATGTTTCCAGCATATTTAAGAACAAAACCATATTTAATTTTCTTTAAAAAAATAGGGGGAAA |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
@HD VN:1.0 SO:coordinate | |
@SQ SN:I LN:15582116 | |
m141231_011325_42163R_c100748692550000001823169907081500_s1_p0/159404/14786_24486 2048 I 10001 0 304S16M1I2M1D2M1D5M2D10M1D21M1D3M3I14M1D13M1D3M1I11M1I3M1I9M1D10M2I3M1D11M1I5M1I7M1I3M1I16M1I5M1D6M1I9M1D5M1D16M1D5M9168S * 0 0 CCTAACTCTAACCCTAACCTAACCATGTAACGCCTAACCTAACCCTAACCCTAACCATAACCCTAACGCCAACCCACCCAACGCTAACCCTAACCCTAACCCAACCCCAACCCCACCCAACCCCACCCCAACCTAACCCCTAACCCTAGCCCTAGCCCTAGCCCTAGCCTAGCCTAACCTAACGCCTATAACCTGAACCGCTATACCCCTAACCTTAACGCTTAACCTAACCCTAACCCTAACACCTAAACTACGACCTTAACCCTAGCCTAGCCCTAGCCCTAGCCCTAGCCTAGCCTACCCATAACCCTAACCCTAACGCCAACCTAACTAACCCTAACCTAACCTTAACCCTAACACTACCAAACTAACCCTAACCCTACCCTCACCCTAACCTAAACCCTATCCCTATCACCTAACACTACCCTAACCCGCTAACCTAACCCTAACCCCCTAAACCCTATACCTCTAACCCTAACCCTAACCCTAACCTAACACCTAACCCTACCCTACCCTCACCCTAACCCAACCCCACCCCGCAACCCACGCCCAACCCCAACCCAACCCCAACCCTTAACCTTAACCCTTAACCCTACCCTAACCTTAACCGCATAACCCTAACGCCTCACCTAACCCCTAAGCCCTAACCCTAACCCTAACCCTAACCCCAACCCAACCCTAACCTATACCTAACCCTAACCCTACCTAACTCTAACCTCAACCCAACCCTACCCTAACCTACGCCTAACCGCC |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
@HD VN:1.0 SO:coordinate | |
@SQ SN:chr1 LN:249250621 | |
@SQ SN:chr2 LN:243199373 | |
@SQ SN:chr3 LN:198022430 | |
@SQ SN:chr4 LN:191154276 | |
@SQ SN:chr5 LN:180915260 | |
@SQ SN:chr6 LN:171115067 | |
@SQ SN:chr7 LN:159138663 | |
@SQ SN:chr8 LN:146364022 | |
@SQ SN:chr9 LN:141213431 |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
>m141225_192409_42156_c100747972550000001823169907081546_s1_p0/9890/2369_12657 | |
CCAAGCGCTGTAGATTGAGTGTCGCAGCGTCGGTTGTGAATCTCAATCTCAGGAGGCTTAGATCTGTCTGAGGATTATAAATGGTGGCGCTATACCAAAAAACTATAAGATCATCGGATCTACACGATACAGGGATATGATTGGTTGAGGTGTTCAGTCCACCATTCCATATACAAAATGTGGCTTTAATTCGATTTTAATGCTGGCCACAGTACAGCAAATAAATGAAGTTCATATCAGCACACTTCCGTTATATGGGTGGCGTTCAGGAACCGGTACAACGACTCATTGCGCTGCCCCAGAGAAGCGGTTCCTGAGTGAGCTGCTCACATCTACCACCTTGGTCCTGCTCACCTTTTTCTCCTCCCGCTCTCCTCCCCCAACCACTCTGATCACTCCCTTCGCTACAAATTCCCCTGCGATGGGACACACTAGCACTAGCACTGTCCACATGAGGGTTTAGTCTGGTCCCTCCACCTTATAAAAGATTTCTAATACCAGTCAAATTATGCGCTGATCAGTTTTCAGATGTTTTAAAAATCTCAATAGAGCTGTCTTCAAATTGTAACAAGACATTTACTCATAAGAATAGAGAATTAAAATAATACGATCGATGGTCAGGAACAATTCCAGGAGGAACCAAGAAAAATGAAAAAGCACATATAGGGTGGATACTCTCCTGATCCTGAAATTGCAACTTTAGTCTATTAGGTTTTTTTGTTTTTGTTCTTTGGAGGCAGAGTCTCAACTCTCCGCAGGCTGGAGTGTAGTGCTGCGATCTTCACAGCTGCACTGAACCTCGTCTCCTGGGTTTTAACGGCGATTCTCCTGCCTCAGCCTCTACCGAGTAGGTCTGTGGATTAAAGGCACTGCCACCTTATGCCTTGCCTATATTTTTGTACTTTTTAGTTAGAGAGAGGTTTCACCATGTTGGCCAGGCGTCTT |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
sort-error.vcf |
This file has been truncated, but you can view the full file.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
chr1 10000 10468 | |
chr1 10627 10998 | |
chr1 11224 11448 | |
chr1 19305 19443 | |
chr1 30867 30948 | |
chr1 33449 33541 | |
chr1 52137 52237 | |
chr1 54712 54817 | |
chr1 66157 66632 | |
chr1 83505 83682 |
This file has been truncated, but you can view the full file.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
##fileformat=VCFv4.2 | |
##contig=<ID=1,length=249250621> | |
##contig=<ID=2,length=243199373> | |
##contig=<ID=3,length=198022430> | |
##contig=<ID=4,length=191154276> | |
##contig=<ID=5,length=180915260> | |
##contig=<ID=6,length=171115067> | |
##contig=<ID=7,length=159138663> | |
##contig=<ID=8,length=146364022> | |
##contig=<ID=9,length=141213431> |