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== 2017-10-06 15:43:36,500 easyblock.py:272 INFO This is EasyBuild 3.4.0 (framework: 3.4.0, easyblocks: 3.4.0) on host node18.cluster.
== 2017-10-06 15:43:36,500 easyblock.py:278 INFO This is easyblock EB_ESMF from module easybuild.easyblocks.esmf (/home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyblocks-3.4.0-py2.7.egg/easybuild/easyblocks/e/esmf.pyo)
== 2017-10-06 15:43:36,501 easyblock.py:804 INFO Build dir set to /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18
== 2017-10-06 15:43:36,501 config.py:451 DEBUG software install path as specified by 'installpath' and 'subdir_software': /home/eb/software
== 2017-10-06 15:43:36,501 easyconfig.py:1688 DEBUG Determining software installation subdir for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,501 easyconfig.py:1694 DEBUG Obtained subdir ESMF/6.3.0rp1-intel-2017a-HDF5-1.8.18
== 2017-10-06 15:43:36,501 easyblock.py:845 INFO Software install dir set to /home/eb/software/ESMF/6.3.0rp1-intel-2017a-HDF5-1.8.18
== 2017-10-06 15:43:36,501 config.py:451 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /home/eb/modules
== 2017-10-06 15:43:36,501 easyblock.py:850 INFO Module install dir set to /home/eb/modules/all
== 2017-10-06 15:43:36,501 easyblock.py:257 INFO Init completed for application name ESMF version 6.3.0rp1
== 2017-10-06 15:43:36,502 easyblock.py:2624 INFO Obtained application instance of for ESMF (easyblock: None)
== 2017-10-06 15:43:36,502 easyblock.py:2637 DEBUG Skip set to False
== 2017-10-06 15:43:36,502 build_log.py:232 INFO building and installing ESMF/6.3.0rp1-intel-2017a-HDF5-1.8.18...
== 2017-10-06 15:43:36,502 easyblock.py:2408 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False
== 2017-10-06 15:43:36,502 build_log.py:232 INFO fetching files...
== 2017-10-06 15:43:36,502 easyblock.py:2416 INFO Starting fetch step
== 2017-10-06 15:43:36,502 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,502 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:36,503 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:36,503 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:36,503 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:36,503 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:36,503 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:36,503 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,503 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:36,503 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:36,503 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:36,503 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:36,504 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:36,504 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:36,504 easyblock.py:2419 INFO Running method fetch_step part of step fetch
== 2017-10-06 15:43:36,504 easyblock.py:1541 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
== 2017-10-06 15:43:36,504 filetools.py:305 INFO Command eb found at /home/eb/software/EasyBuild/3.4.0/bin/eb
== 2017-10-06 15:43:36,504 tools.py:262 DEBUG Also considering installation prefix /home/eb/software/EasyBuild/3.4.0...
== 2017-10-06 15:43:36,504 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/hilboll/eb/easyconfigs/easybuild/easyconfigs
== 2017-10-06 15:43:36,505 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs
== 2017-10-06 15:43:36,505 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.4.0-py2.7.egg/easybuild/easyconfigs/easybuild/easyconfigs
== 2017-10-06 15:43:36,505 tools.py:267 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs
== 2017-10-06 15:43:36,505 tools.py:271 DEBUG Added easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2017-10-06 15:43:36,505 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/vsc_install-0.10.26-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,505 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/vsc_base-2.5.8-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,505 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_framework-3.4.0-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,505 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyblocks-3.4.0-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,505 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.4.0-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,506 tools.py:271 DEBUG Added /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.4.0-py2.7.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2017-10-06 15:43:36,506 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild/easyconfigs
== 2017-10-06 15:43:36,506 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs
== 2017-10-06 15:43:36,506 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs
== 2017-10-06 15:43:36,506 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs
== 2017-10-06 15:43:36,506 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs
== 2017-10-06 15:43:36,506 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs
== 2017-10-06 15:43:36,506 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs
== 2017-10-06 15:43:36,506 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs
== 2017-10-06 15:43:36,507 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gtk-2.0/easybuild/easyconfigs
== 2017-10-06 15:43:36,507 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs
== 2017-10-06 15:43:36,507 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/easybuild/easyconfigs
== 2017-10-06 15:43:36,507 easyblock.py:639 INFO Found file esmf_6_3_0rp1_src.tar.gz at /home/eb/sources/e/ESMF/esmf_6_3_0rp1_src.tar.gz
== 2017-10-06 15:43:36,507 easyblock.py:369 DEBUG File /home/eb/sources/e/ESMF/esmf_6_3_0rp1_src.tar.gz found for source esmf_6_3_0rp1_src.tar.gz
== 2017-10-06 15:43:36,507 easyblock.py:381 INFO Added sources: [{'path': '/home/eb/sources/e/ESMF/esmf_6_3_0rp1_src.tar.gz', 'cmd': None, 'finalpath': '/dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18', 'name': 'esmf_6_3_0rp1_src.tar.gz', 'checksum': None}]
== 2017-10-06 15:43:36,508 filetools.py:305 INFO Command eb found at /home/eb/software/EasyBuild/3.4.0/bin/eb
== 2017-10-06 15:43:36,508 tools.py:262 DEBUG Also considering installation prefix /home/eb/software/EasyBuild/3.4.0...
== 2017-10-06 15:43:36,508 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/hilboll/eb/easyconfigs/easybuild/easyconfigs
== 2017-10-06 15:43:36,508 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs
== 2017-10-06 15:43:36,508 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.4.0-py2.7.egg/easybuild/easyconfigs/easybuild/easyconfigs
== 2017-10-06 15:43:36,508 tools.py:267 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs
== 2017-10-06 15:43:36,509 tools.py:271 DEBUG Added easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2017-10-06 15:43:36,509 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/vsc_install-0.10.26-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,509 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/vsc_base-2.5.8-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,509 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_framework-3.4.0-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,509 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyblocks-3.4.0-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,509 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.4.0-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,509 tools.py:271 DEBUG Added /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.4.0-py2.7.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2017-10-06 15:43:36,509 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild/easyconfigs
== 2017-10-06 15:43:36,509 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs
== 2017-10-06 15:43:36,510 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs
== 2017-10-06 15:43:36,510 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs
== 2017-10-06 15:43:36,510 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs
== 2017-10-06 15:43:36,510 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs
== 2017-10-06 15:43:36,510 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs
== 2017-10-06 15:43:36,510 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs
== 2017-10-06 15:43:36,510 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gtk-2.0/easybuild/easyconfigs
== 2017-10-06 15:43:36,510 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs
== 2017-10-06 15:43:36,510 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/easybuild/easyconfigs
== 2017-10-06 15:43:36,511 easyblock.py:639 INFO Found file ESMF-6.1.1_libopts.patch at /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch
== 2017-10-06 15:43:36,511 easyblock.py:421 DEBUG File /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch found for patch ESMF-6.1.1_libopts.patch
== 2017-10-06 15:43:36,511 filetools.py:305 INFO Command eb found at /home/eb/software/EasyBuild/3.4.0/bin/eb
== 2017-10-06 15:43:36,511 tools.py:262 DEBUG Also considering installation prefix /home/eb/software/EasyBuild/3.4.0...
== 2017-10-06 15:43:36,511 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/hilboll/eb/easyconfigs/easybuild/easyconfigs
== 2017-10-06 15:43:36,511 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs
== 2017-10-06 15:43:36,511 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.4.0-py2.7.egg/easybuild/easyconfigs/easybuild/easyconfigs
== 2017-10-06 15:43:36,511 tools.py:267 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs
== 2017-10-06 15:43:36,512 tools.py:271 DEBUG Added easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2017-10-06 15:43:36,512 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/vsc_install-0.10.26-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,512 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/vsc_base-2.5.8-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,512 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_framework-3.4.0-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,512 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyblocks-3.4.0-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,512 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.4.0-py2.7.egg/easybuild/easyconfigs
== 2017-10-06 15:43:36,512 tools.py:271 DEBUG Added /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild_easyconfigs-3.4.0-py2.7.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2017-10-06 15:43:36,512 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/lib/python2.7/site-packages/easybuild/easyconfigs
== 2017-10-06 15:43:36,512 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs
== 2017-10-06 15:43:36,513 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs
== 2017-10-06 15:43:36,513 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs
== 2017-10-06 15:43:36,513 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs
== 2017-10-06 15:43:36,513 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs
== 2017-10-06 15:43:36,513 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs
== 2017-10-06 15:43:36,513 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs
== 2017-10-06 15:43:36,513 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gtk-2.0/easybuild/easyconfigs
== 2017-10-06 15:43:36,513 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs
== 2017-10-06 15:43:36,513 tools.py:267 DEBUG Checking for easybuild/easyconfigs at /home/eb/software/EasyBuild/3.4.0/easybuild/easyconfigs
== 2017-10-06 15:43:36,513 easyblock.py:639 INFO Found file ESMF-6.3.0rp1_fix-file-open-test.patch at /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch
== 2017-10-06 15:43:36,514 easyblock.py:421 DEBUG File /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch found for patch ESMF-6.3.0rp1_fix-file-open-test.patch
== 2017-10-06 15:43:36,514 easyblock.py:446 INFO Added patches: [{'path': '/home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch', 'name': 'ESMF-6.1.1_libopts.patch', 'checksum': None}, {'path': '/home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch', 'name': 'ESMF-6.3.0rp1_fix-file-open-test.patch', 'checksum': None}]
== 2017-10-06 15:43:36,514 filetools.py:599 DEBUG Using blocksize 16777216 for calculating the checksum
== 2017-10-06 15:43:36,526 easyblock.py:1592 INFO md5 checksum for /home/eb/sources/e/ESMF/esmf_6_3_0rp1_src.tar.gz: f47d9c00553bc560bfc76b0cdb198e5b
== 2017-10-06 15:43:36,526 filetools.py:599 DEBUG Using blocksize 16777216 for calculating the checksum
== 2017-10-06 15:43:36,552 easyblock.py:1592 INFO sha256 checksum for /home/eb/sources/e/ESMF/esmf_6_3_0rp1_src.tar.gz: 89d9466fec099f375ec2182efd80af79e2ef6d486cdd51d5e18e9ab77b98dc1f
== 2017-10-06 15:43:36,553 filetools.py:599 DEBUG Using blocksize 16777216 for calculating the checksum
== 2017-10-06 15:43:36,553 easyblock.py:1592 INFO md5 checksum for /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch: 4e0f59a1bca240555742f5cc91736b78
== 2017-10-06 15:43:36,553 filetools.py:599 DEBUG Using blocksize 16777216 for calculating the checksum
== 2017-10-06 15:43:36,553 easyblock.py:1592 INFO sha256 checksum for /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch: 3851627f07c32a7da55d99072d619942bd3a1d9dd002e1557716158e7aacdaf4
== 2017-10-06 15:43:36,553 filetools.py:599 DEBUG Using blocksize 16777216 for calculating the checksum
== 2017-10-06 15:43:36,553 easyblock.py:1592 INFO md5 checksum for /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch: 3dcdce804aed2de23a8921647ba40d18
== 2017-10-06 15:43:36,553 filetools.py:599 DEBUG Using blocksize 16777216 for calculating the checksum
== 2017-10-06 15:43:36,554 easyblock.py:1592 INFO sha256 checksum for /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch: 3e209c21020c9bb8b11149ba182e64968308493f3f8e882cd43f59644c09b4ff
== 2017-10-06 15:43:36,554 easyconfig.py:1676 DEBUG Determining full module name for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0> (force_visible: False)
== 2017-10-06 15:43:36,554 easyconfig.py:1656 DEBUG No alternative software name specified to determine module name with
== 2017-10-06 15:43:36,554 utilities.py:103 DEBUG Module name ESMF/6.3.0rp1-intel-2017a-HDF5-1.8.18 validated
== 2017-10-06 15:43:36,554 easyconfig.py:1683 DEBUG Obtained valid full module name ESMF/6.3.0rp1-intel-2017a-HDF5-1.8.18
== 2017-10-06 15:43:36,554 config.py:451 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /home/eb/modules
== 2017-10-06 15:43:36,554 easyblock.py:1625 INFO Checking dirs that need to be created: ['/home/eb/software/ESMF/6.3.0rp1-intel-2017a-HDF5-1.8.18', '/home/eb/modules/all/ESMF', '/home/eb/modules/geo/ESMF']
== 2017-10-06 15:43:36,555 filetools.py:1099 DEBUG Not creating existing path /home/eb/software/ESMF/6.3.0rp1-intel-2017a-HDF5-1.8.18
== 2017-10-06 15:43:36,555 filetools.py:1099 DEBUG Not creating existing path /home/eb/modules/all/ESMF
== 2017-10-06 15:43:36,555 filetools.py:1099 DEBUG Not creating existing path /home/eb/modules/geo/ESMF
== 2017-10-06 15:43:36,555 easyblock.py:2408 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False
== 2017-10-06 15:43:36,555 build_log.py:232 INFO creating build dir, resetting environment...
== 2017-10-06 15:43:36,555 easyblock.py:2416 INFO Starting ready step
== 2017-10-06 15:43:36,555 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,556 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:36,556 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:36,556 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:36,556 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:36,556 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:36,556 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:36,556 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,556 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:36,556 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:36,556 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:36,557 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:36,557 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:36,557 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:36,557 easyblock.py:2419 INFO Running method check_readiness_step part of step ready
== 2017-10-06 15:43:36,557 easyblock.py:1486 DEBUG Desired parallelism specified via 'parallel' build option: None
== 2017-10-06 15:43:36,558 affinity.py:211 DEBUG sched_getaffinity for pid 191161 returned cpuset 0-27
== 2017-10-06 15:43:36,558 run.py:159 DEBUG run_cmd: running cmd ulimit -u (in /home/hilboll/eb/repos/easybuild-easyconfigs)
== 2017-10-06 15:43:36,558 run.py:179 INFO running cmd: ulimit -u
== 2017-10-06 15:43:36,566 run.py:464 DEBUG cmd "ulimit -u" exited with exitcode 0 and output:
4096
== 2017-10-06 15:43:36,566 run.py:508 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w)
== 2017-10-06 15:43:36,567 systemtools.py:726 INFO Limiting parallellism from 28 to 8
== 2017-10-06 15:43:36,567 easyblock.py:1489 INFO Setting parallelism: 8
== 2017-10-06 15:43:36,567 modules.py:641 DEBUG Current MODULEPATH: /home/eb/modules/all
== 2017-10-06 15:43:36,567 modules.py:648 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2017-10-06 15:43:36,568 modules.py:648 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2017-10-06 15:43:36,568 modules.py:652 DEBUG Running module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse list' from /home/hilboll/eb/repos/easybuild-easyconfigs
== 2017-10-06 15:43:36,597 modules.py:658 DEBUG Output of module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse list': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "Yi9tb2R1bGVmaWxlcyIsWyJ2ZXJzaW9uIl09Mix9";
os.environ["_ModuleTable_Sz_"] = "2";
; stderr: EasyBuild/3.4.0
== 2017-10-06 15:43:36,597 modules.py:1109 DEBUG Output found in stdout, seems like '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse list' ran fine
== 2017-10-06 15:43:36,598 modules.py:695 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to []
== 2017-10-06 15:43:36,598 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '')
== 2017-10-06 15:43:36,598 modules.py:695 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2017-10-06 15:43:36,598 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
== 2017-10-06 15:43:36,598 easyblock.py:1494 WARNING Loaded modules detected: ['EasyBuild/3.4.0']
== 2017-10-06 15:43:36,598 easyconfig.py:608 DEBUG Dependencies BEFORE filtering: [{'external_module_metadata': {}, 'full_mod_name': 'netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18', 'toolchain': {'version': '2017a', 'name': 'intel'}, 'name': 'netCDF', 'dummy': False, 'short_mod_name': 'netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18', 'external_module': False, 'versionsuffix': '-HDF5-1.8.18', 'version': '4.4.1.1', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18', 'toolchain': {'version': '2017a', 'name': 'intel'}, 'name': 'netCDF-Fortran', 'dummy': False, 'short_mod_name': 'netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18', 'external_module': False, 'versionsuffix': '-HDF5-1.8.18', 'version': '4.4.4', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18', 'toolchain': {'version': '2017a', 'name': 'intel'}, 'name': 'netCDF-C++4', 'dummy': False, 'short_mod_name': 'netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18', 'external_module': False, 'versionsuffix': '-HDF5-1.8.18', 'version': '4.3.0', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}]
== 2017-10-06 15:43:36,598 toolchain.py:376 DEBUG add_dependencies: adding toolchain dependencies [{'external_module_metadata': {}, 'full_mod_name': 'netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18', 'toolchain': {'version': '2017a', 'name': 'intel'}, 'name': 'netCDF', 'dummy': False, 'short_mod_name': 'netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18', 'external_module': False, 'versionsuffix': '-HDF5-1.8.18', 'version': '4.4.1.1', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18', 'toolchain': {'version': '2017a', 'name': 'intel'}, 'name': 'netCDF-Fortran', 'dummy': False, 'short_mod_name': 'netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18', 'external_module': False, 'versionsuffix': '-HDF5-1.8.18', 'version': '4.4.4', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18', 'toolchain': {'version': '2017a', 'name': 'intel'}, 'name': 'netCDF-C++4', 'dummy': False, 'short_mod_name': 'netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18', 'external_module': False, 'versionsuffix': '-HDF5-1.8.18', 'version': '4.3.0', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}]
== 2017-10-06 15:43:36,599 toolchain.py:386 DEBUG add_dependencies: MODULEPATH: /home/eb/modules/all
== 2017-10-06 15:43:36,599 modules.py:641 DEBUG Current MODULEPATH: /home/eb/modules/all
== 2017-10-06 15:43:36,599 modules.py:648 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2017-10-06 15:43:36,599 modules.py:648 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2017-10-06 15:43:36,599 modules.py:652 DEBUG Running module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse --show-hidden avail ' from /home/hilboll/eb/repos/easybuild-easyconfigs
== 2017-10-06 15:43:36,699 modules.py:658 DEBUG Output of module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse --show-hidden avail ': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["_ModuleTable001_"] = "X01vZHVsZVRhYmxlXz17WyJhY3RpdmVTaXplIl09MSxiYXNlTXBhdGhBPXsiL2hvbWUvZWIvbW9kdWxlcy9hbGwiLH0sWyJjX3JlYnVpbGRUaW1lIl09ZmFsc2UsWyJjX3Nob3J0VGltZSJdPWZhbHNlLGZhbWlseT17fSxpbmFjdGl2ZT17fSxtVD17RWFzeUJ1aWxkPXtbIkZOIl09Ii9ob21lL2ViL21vZHVsZXMvYWxsL0Vhc3lCdWlsZC8zLjQuMC5sdWEiLFsiZGVmYXVsdCJdPTEsWyJmdWxsTmFtZSJdPSJFYXN5QnVpbGQvMy40LjAiLFsibG9hZE9yZGVyIl09MSxwcm9wVD17fSxbInNob3J0Il09IkVhc3lCdWlsZCIsWyJzdGF0dXMiXT0iYWN0aXZlIix9LH0sbXBhdGhBPXsiL2hvbWUvZWIvbW9kdWxlcy9hbGwiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL29wdC9vaHBjL3B1";
os.environ["_ModuleTable002_"] = "Yi9tb2R1bGVmaWxlcyIsWyJ2ZXJzaW9uIl09Mix9";
os.environ["_ModuleTable_Sz_"] = "2";
; stderr: /home/eb/modules/all:
AMOS/
AMOS/3.1.0-intel-2016a
ANTLR/
ANTLR/2.7.7-intel-2016a-Python-2.7.11
Autoconf/
Autoconf/2.69-GCCcore-4.9.3
Autoconf/2.69-GCCcore-6.3.0
Autoconf/2.69-intel-2016a
Autoconf/2.69
Automake/
Automake/1.15-GCCcore-4.9.3
Automake/1.15-GCCcore-6.3.0
Automake/1.15-intel-2016a
Automake/1.15
Autotools/
Autotools/20150215-GCCcore-4.9.3
Autotools/20150215-GCCcore-6.3.0
Autotools/20150215-intel-2016a
Autotools/20150215
Biggus/
Biggus/0.13.0-intel-2016a-Python-2.7.11
Biggus/0.13.0-intel-2016a-Python-3.5.1
Biggus/0.14.0-intel-2016a-Python-2.7.11
Biggus/0.14.0-intel-2016a-Python-3.5.1
Biggus/0.15.0-intel-2017a-Python-3.6.1
Bison/
Bison/3.0.4-foss-2016a
Bison/3.0.4-GCCcore-4.9.3
Bison/3.0.4-GCCcore-6.3.0
Bison/3.0.4-intel-2016a
Bison/3.0.4
Blosc/
Blosc/1.11.1-intel-2016a
Blosc/1.12.1-intel-2017a
Boost/
Boost/1.60.0-foss-2016a
Boost/1.63.0-intel-2017a-Python-2.7.13
CDO/
CDO/1.7.2-intel-2016a
CDO/1.9.0-intel-2017a
CFITSIO/
CFITSIO/3.38-intel-2016a
CGAL/
CGAL/4.9-intel-2017a-Python-2.7.13
CMake/
CMake/3.4.3-foss-2016a
CMake/3.4.3-intel-2016a
CMake/3.7.2-GCCcore-6.3.0
CMake/3.8.0-GCCcore-6.3.0
CMake/3.8.2-GCCcore-6.3.0
Cartopy/
Cartopy/0.14.2-intel-2016a-Python-2.7.11
Cartopy/0.14.2-intel-2016a-Python-3.5.1
Cartopy/0.15.1-intel-2017a-Python-3.6.1
Doxygen/
Doxygen/1.8.11-foss-2016a
Doxygen/1.8.11-intel-2016a
Doxygen/1.8.13-GCCcore-6.3.0
EMOSLIB/
EMOSLIB/4.4.7-intel-2016a-Python-2.7.11
EMOSLIB/4.4.7-intel-2016a-Python-3.5.1
EMOSLIB/4.5.1-intel-2017a-Python-3.6.1
EasyBuild/
EasyBuild/3.0.1
EasyBuild/3.1.0
EasyBuild/3.1.1
EasyBuild/3.2.1
EasyBuild/3.3.1
EasyBuild/3.4.0
Eigen/
Eigen/3.3.3-GCCcore-6.3.0
FFTW/
FFTW/3.3.4-gompi-2016a
FFTW/3.3.4-intel-2016a
FFTW/3.3.6-gompi-2017a
FFTW/3.3.6-intel-2017a
FFmpeg/
FFmpeg/3.0.2-intel-2016a
FFmpeg/3.3.3-intel-2017a
FLEXPART/
FLEXPART/9.0.2-intel-2016a-ecmwf
Fiona/
Fiona/1.7.1-intel-2016a-Python-2.7.11
Fiona/1.7.1-intel-2016a-Python-3.5.1
Fiona/1.7.9-intel-2017a-Python-3.6.1
GC3Pie/
GC3Pie/2.4.2
GCC/
GCC/4.9.3-2.25
GCC/6.3.0-2.27
GCCcore/
GCCcore/4.9.3
GCCcore/6.3.0
GDAL/
GDAL/2.1.0-intel-2016a-Python-2.7.11
GDAL/2.1.0-intel-2016a-Python-3.5.1
GDAL/2.1.0-intel-2016a
GDAL/2.2.0-intel-2017a-Python-3.6.1
GEOS/
GEOS/3.5.0-intel-2016a-Python-2.7.11
GEOS/3.5.0-intel-2016a-Python-3.5.1
GEOS/3.6.1-intel-2017a-Python-3.6.1
GLib/
GLib/2.47.5-intel-2016a
GLib/2.52.0-intel-2017a
GMP/
GMP/6.1.0-intel-2016a
GMP/6.1.2-GCCcore-6.3.0
GMT/
GMT/5.3.1-intel-2016a
GSL/
GSL/2.2.1-intel-2016a
Ghostscript/
Ghostscript/9.20-intel-2016a-nogui
Ghostscript/9.21-intel-2017a
HDF/
HDF/4.2.11-intel-2016a
HDF/4.2.12-intel-2017a
HDF5/
HDF5/1.8.16-foss-2016a
HDF5/1.8.16-intel-2016a
HDF5/1.8.18-intel-2017a
IPython/
IPython/4.2.0-intel-2016a-Python-2.7.11
IPython/5.1.0-intel-2016a-Python-2.7.11
IPython/5.1.0-intel-2016a-Python-3.5.1
IPython/5.2.2-intel-2016a-Python-2.7.11
IPython/5.2.2-intel-2016a-Python-3.5.1
IUPy/
IUPy/0.3.2-intel-2016a-Python-3.5.1
IUPy/0.3.3-intel-2016a-Python-2.7.11
IUPy/0.3.3-intel-2016a-Python-3.5.1
ImageMagick/
ImageMagick/7.0.5-4-intel-2017a
Iris/
Iris/1.11.0-intel-2016a-Python-2.7.11
Iris/1.11.0-intel-2016a-Python-3.5.1
Iris/1.12.0-intel-2016a-Python-2.7.11
Iris/1.12.0-intel-2016a-Python-3.5.1
Iris/1.13.0-intel-2017a-Python-3.6.1
JasPer/
JasPer/1.900.1-intel-2016a
JasPer/1.900.1-intel-2017a
JasPer/2.0.12-intel-2017a
Java/
Java/1.8.0_72
Java/1.8.0_92
LAME/
LAME/3.99.5-intel-2017a
LAMOSpy/
LAMOSpy/0.1-intel-2016a-Python-2.7.11-TEST
LAMOSpy/0.1-intel-2016a-Python-2.7.11
LAMOSpy/0.1-intel-2016a-Python-3.5.1
LAMOSpy/0.2-intel-2016a-Python-2.7.11
LAMOSpy/0.2-intel-2016a-Python-3.5.1
LLVM/
LLVM/3.7.1-intel-2016a
LLVM/4.0.0-intel-2017a
LZO/
LZO/2.09-intel-2016a
LZO/2.10-intel-2017a
LibTIFF/
LibTIFF/4.0.6-intel-2016a
LibTIFF/4.0.7-intel-2017a
LibTIFF/4.0.8-intel-2017a
LibUUID/
LibUUID/1.0.3-intel-2016a
LittleCMS/
LittleCMS/2.8-intel-2017a
M4/
M4/1.4.17-foss-2016a
M4/1.4.17-GCCcore-4.9.3
M4/1.4.17-intel-2016a
M4/1.4.17
M4/1.4.18-GCCcore-6.3.0
METIS/
METIS/5.1.0-foss-2016a-32bitIDX
METIS/5.1.0-intel-2017a
MPFR/
MPFR/3.1.5-intel-2017a
MUMmer/
MUMmer/3.23-intel-2016a
Mako/
Mako/1.0.6-intel-2017a-Python-2.7.13
Mesa/
Mesa/17.0.2-intel-2017a
NASM/
NASM/2.11.08-foss-2016a
NASM/2.11.08-intel-2016a
NASM/2.12.01-intel-2016a
NASM/2.12.02-intel-2017a
NCO/
NCO/4.6.2-intel-2016a-Python-2.7.11
OpenBLAS/
OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0
OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0
OpenFOAM/
OpenFOAM/4.1-intel-2017a
OpenMPI/
OpenMPI/1.10.2-GCC-4.9.3-2.25
OpenMPI/2.0.2-GCC-6.3.0-2.27
OpenPGM/
OpenPGM/5.2.122-intel-2016a
OpenPGM/5.2.122-intel-2017a
PCRE/
PCRE/8.38-intel-2016a
PCRE/8.40-intel-2017a
PCRE2/
PCRE2/10.21-intel-2016a
PROJ/
PROJ/4.9.2-intel-2016a
PROJ/4.9.3-intel-2017a
ParaView/
ParaView/5.2.0-intel-2017a-mpi
Perl/
Perl/5.22.2-intel-2016a
Pillow/
Pillow/3.2.0-intel-2016a-Python-2.7.11
Pillow/3.4.2-intel-2016a-Python-3.5.1
Pillow/4.1.1-intel-2017a-Python-3.6.1
PnetCDF/
PnetCDF/1.8.1-intel-2016a
PyTables/
PyTables/3.3.0-intel-2016a-Python-2.7.11
PyTables/3.3.0-intel-2016a-Python-3.5.1
PyTables/3.4.2-intel-2017a-Python-3.6.1
PyYAML/
PyYAML/3.12-intel-2016a-Python-2.7.11
PyYAML/3.12-intel-2016a-Python-3.5.1
PyYAML/3.12-intel-2017a-Python-3.6.1
PyZMQ/
PyZMQ/15.2.0-intel-2016a-Python-2.7.11-zmq4
PyZMQ/15.2.0-intel-2016a-Python-3.5.1-zmq4
PyZMQ/16.0.2-intel-2017a-Python-3.6.1-zmq4
Pygments/
Pygments/2.2.0-intel-2017a-Python-3.6.1
Python/
Python/2.7.11-intel-2016a
Python/2.7.13-intel-2017a
Python/3.5.1-intel-2016a
Python/3.6.1-intel-2017a
Qt/
Qt/4.8.7-intel-2017a
R/
R/3.2.3-foss-2016a-bare
R/3.3.2-intel-2016a
SCOTCH/
SCOTCH/6.0.4-foss-2016a
SCOTCH/6.0.4-intel-2017a
SQLite/
SQLite/3.9.2-intel-2016a
SQLite/3.17.0-GCCcore-6.3.0
SWIG/
SWIG/3.0.8-intel-2016a-Python-2.7.11
SWIG/3.0.8-intel-2016a-Python-3.5.1
SWIG/3.0.12-intel-2017a-Python-2.7.13
SWIG/3.0.12-intel-2017a-Python-3.6.1
ScaLAPACK/
ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0
ScaLAPACK/2.0.2-gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.7.0
Shapely/
Shapely/1.5.17-intel-2016a-Python-2.7.11
Sphinx/
Sphinx/1.6.3-intel-2017a-Python-3.6.1
Szip/
Szip/2.1-foss-2016a
Szip/2.1-intel-2016a
Szip/2.1-intel-2017a
Tcl/
Tcl/8.6.4-intel-2016a
Tcl/8.6.6-GCCcore-6.3.0
Theano/
Theano/0.10.0b1-intel-2017a-Python-3.6.1
Tk/
Tk/8.6.4-intel-2016a-no-X11
UDUNITS/
UDUNITS/2.2.20-intel-2016a
UDUNITS/2.2.24-intel-2017a
WPS/
WPS/3.8.0-intel-2016a-dmpar
WPS/3.8.1-intel-2016a-dmpar
WPS/3.9.1-intel-2017a-dmpar
WRF/
WRF/3.8.0-intel-2016a-dmpar
WRF/3.8.1-intel-2016a-Chem-dmpar
WRF/3.8.1-intel-2016a-dmpar-Chem-kpp
WRF/3.8.1-intel-2016a-dmpar
WRF/3.9.1.1-intel-2017a-dmpar-Chem-kpp
X11/
X11/20160819-intel-2016a
X11/20170314-GCCcore-6.3.0
XZ/
XZ/5.2.2-GCCcore-4.9.3
XZ/5.2.2-intel-2016a
XZ/5.2.3-GCCcore-6.3.0
YAXT/
YAXT/0.5.1-intel-2016a
Yasm/
Yasm/1.3.0-intel-2016a
Yasm/1.3.0-intel-2017a
ZeroMQ/
ZeroMQ/4.1.4-intel-2016a
ZeroMQ/4.2.2-intel-2017a
basemap/
basemap/1.0.7-intel-2017a-Python-3.6.1
binutils/
binutils/2.25-GCCcore-4.9.3
binutils/2.25
binutils/2.27-GCCcore-6.3.0
binutils/2.27
byacc/
byacc/20160324-intel-2016a
byacc/20170709-GCCcore-6.3.0
bzip2/
bzip2/1.0.6-foss-2016a
bzip2/1.0.6-GCCcore-4.9.3
bzip2/1.0.6-GCCcore-6.3.0
bzip2/1.0.6-intel-2016a
cURL/
cURL/7.47.0-foss-2016a
cURL/7.47.0-intel-2016a
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foss/2016a
foss/2017a
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gettext/0.19.8.1
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gnuplot/
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gompi/2016a
gompi/2017a
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ifort/
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iimpi/2017a
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impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27
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intel/
intel/2016a
intel/2017a
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jupyterhub/0.6.1-intel-2016a-Python-3.5.1
kbproto/
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libICE/
libICE/1.0.9-intel-2016a
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libXau/
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libXdamage/
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libXdmcp/
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libXext/
libXext/1.3.3-intel-2016a
libXfixes/
libXfixes/5.0.1-intel-2016a
libXfont/
libXfont/1.5.1-intel-2016a
libXi/
libXi/1.7.6-intel-2016a
libXpm/
libXpm/3.5.11-intel-2016a
libXrender/
libXrender/0.9.9-intel-2016a
libcerf/
libcerf/1.4-intel-2016a
libdap/
libdap/3.18.1-intel-2016a-Python-2.7.11
libdrm/
libdrm/2.4.67-intel-2016a
libdrm/2.4.76-intel-2017a
libffi/
libffi/3.2.1-GCCcore-6.3.0
libffi/3.2.1-intel-2016a
libfontenc/
libfontenc/1.1.3-intel-2016a
libgd/
libgd/2.1.1-intel-2016a
libiconv/
libiconv/1.15-GCCcore-6.3.0
libjpeg-turbo/
libjpeg-turbo/1.4.2-foss-2016a
libjpeg-turbo/1.4.2-intel-2016a
libjpeg-turbo/1.5.1-intel-2017a
libpciaccess/
libpciaccess/0.13.4-intel-2016a
libpng/
libpng/1.6.21-foss-2016a
libpng/1.6.21-intel-2016a
libpng/1.6.24-GCCcore-4.9.3
libpng/1.6.29-GCCcore-6.3.0
libpthread-stubs/
libpthread-stubs/0.3-intel-2016a
libreadline/
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libreadline/6.3-intel-2016a
libreadline/7.0-GCCcore-6.3.0
libsodium/
libsodium/1.0.6-intel-2016a
libsodium/1.0.12-intel-2017a
libtool/
libtool/2.4.6-GCCcore-4.9.3
libtool/2.4.6-GCCcore-6.3.0
libtool/2.4.6-intel-2016a
libtool/2.4.6
libunwind/
libunwind/1.1-intel-2016a
libxcb/
libxcb/1.11.1-intel-2016a
libxml2/
libxml2/2.9.3-intel-2016a
libxml2/2.9.4-GCCcore-4.9.3
libxml2/2.9.4-GCCcore-6.3.0
libxml2/2.9.4-intel-2017a-Python-2.7.13
libxml2/2.9.4-intel-2017a-Python-3.6.1
libyaml/
libyaml/0.1.6-intel-2016a
libyaml/0.1.7
makedepend/
makedepend/1.0.5-intel-2016a
matplotlib/
matplotlib/1.5.1-intel-2016a-Python-2.7.11-freetype-2.6.3
matplotlib/1.5.1-intel-2016a-Python-2.7.11
matplotlib/1.5.1-intel-2016a-Python-3.5.1
matplotlib/2.0.2-intel-2017a-Python-3.6.1-libpng-1.6.29
ncurses/
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ncurses/6.0-GCCcore-4.9.3
ncurses/6.0-GCCcore-6.3.0
ncurses/6.0-intel-2016a
ncurses/6.0
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netCDF/4.3.3.1-intel-2016a
netCDF/4.4.0-foss-2016a
netCDF/4.4.0-intel-2016a
netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18
netCDF-C++4/
netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18
netCDF-Fortran/
netCDF-Fortran/4.4.3-foss-2016a
netCDF-Fortran/4.4.3-intel-2016a
netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18
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netcdf4-python/1.2.6-intel-2016a-Python-2.7.11
netcdf4-python/1.2.6-intel-2016a-Python-3.5.1
netcdf4-python/1.2.9-intel-2017a-Python-3.6.1
nettle/
nettle/3.3-intel-2017a
nodejs/
nodejs/4.4.7-intel-2016a
numactl/
numactl/2.0.11-GCC-4.9.3-2.25
numactl/2.0.11-GCC-6.3.0-2.27
numba/
numba/0.31.0-intel-2016a-Python-2.7.11
numba/0.31.0-intel-2016a-Python-3.5.1
numba/0.34.0-intel-2017a-Python-3.6.1
numexpr/
numexpr/2.6.1-intel-2016a-Python-2.7.11
numexpr/2.6.1-intel-2016a-Python-3.5.1
numexpr/2.6.2-intel-2017a-Python-3.6.1
patchelf/
patchelf/0.9-intel-2016a
path.py/
path.py/8.2.1-intel-2016a-Python-2.7.11
path.py/8.2.1-intel-2016a-Python-3.5.1
pip/
pip/8.0.2-intel-2016a-Python-2.7.11
pip/8.0.2-intel-2016a-Python-3.5.1
pixman/
pixman/0.34.0-GCCcore-6.3.0
pixman/0.34.0-intel-2016a
pkg-config/
pkg-config/0.29-intel-2016a
pkg-config/0.29.1-GCCcore-6.3.0
pkg-config/0.29.1-intel-2016a
pkg-config/0.29.1-intel-2017a
pkg-config/0.29.2-intel-2017a
prompt-toolkit/
prompt-toolkit/1.0.6-intel-2016a-Python-2.7.11
prompt-toolkit/1.0.6-intel-2016a-Python-3.5.1
pyke/
pyke/1.1.1-intel-2016a-Python-2.7.11
pyke/1.1.1-intel-2016a-Python-3.5.1
pyke/1.1.1-intel-2017a-Python-3.6.1
pytest/
pytest/3.2.1-intel-2017a-Python-3.6.1
python-hdf4/
python-hdf4/0.9-intel-2016a-Python-2.7.11
python-hdf4/0.9-intel-2016a-Python-3.5.1
python-hdf4/0.9-intel-2017a-Python-3.6.1
randrproto/
randrproto/1.5.0-intel-2016a
reflexible/
reflexible/0.5.0-intel-2017a-Python-3.6.1
renderproto/
renderproto/0.11-intel-2016a
statsmodels/
statsmodels/0.6.1-intel-2016a-Python-2.7.11
statsmodels/0.6.1-intel-2016a-Python-3.5.1
statsmodels/0.8.0-intel-2017a-Python-3.6.1
tcsh/
tcsh/6.19.00-intel-2016a
tcsh/6.20.00-GCCcore-6.3.0
testpath/
testpath/0.3-intel-2016a-Python-2.7.11
testpath/0.3-intel-2016a-Python-3.5.1
util-linux/
util-linux/2.27.1-intel-2016a
util-linux/2.29.2-intel-2017a
wcwidth/
wcwidth/0.1.7-intel-2016a-Python-2.7.11
wcwidth/0.1.7-intel-2016a-Python-3.5.1
wheel/
wheel/0.29.0-intel-2016a-Python-3.5.1
wrapt/
wrapt/1.10.8-intel-2016a-Python-2.7.11
wrapt/1.10.8-intel-2016a-Python-3.5.1
wrf-python/
wrf-python/1.0b3-intel-2016a-Python-2.7.11
wrf-python/1.0b3-intel-2016a-Python-3.5.1
wrf-python/1.0.3-intel-2017a-Python-3.6.1
x264/
x264/20160430-intel-2016a
x264/20170817-intel-2017a
x265/
x265/2.4-intel-2017a
x265/2.5-intel-2017a
xcb-proto/
xcb-proto/1.11
xextproto/
xextproto/7.3.0-intel-2016a
xorg-macros/
xorg-macros/1.19.0-intel-2016a
xproto/
xproto/7.0.28-intel-2016a
xtrans/
xtrans/1.3.5-intel-2016a
zlib/
zlib/1.2.8-foss-2016a
zlib/1.2.8-GCCcore-4.9.3
zlib/1.2.8-GCCcore-6.3.0
zlib/1.2.8-intel-2016a
zlib/1.2.8
zlib/1.2.11-GCCcore-6.3.0
== 2017-10-06 15:43:36,699 modules.py:1109 DEBUG Output found in stdout, seems like '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse --show-hidden avail ' ran fine
== 2017-10-06 15:43:36,699 modules.py:695 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to []
== 2017-10-06 15:43:36,699 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '')
== 2017-10-06 15:43:36,699 modules.py:695 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2017-10-06 15:43:36,700 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
== 2017-10-06 15:43:36,702 modules.py:430 DEBUG 'module available ' gave 439 answers: ['AMOS/3.1.0-intel-2016a', 'ANTLR/2.7.7-intel-2016a-Python-2.7.11', 'Autoconf/2.69', 'Autoconf/2.69-GCCcore-4.9.3', 'Autoconf/2.69-GCCcore-6.3.0', 'Autoconf/2.69-intel-2016a', 'Automake/1.15', 'Automake/1.15-GCCcore-4.9.3', 'Automake/1.15-GCCcore-6.3.0', 'Automake/1.15-intel-2016a', 'Autotools/20150215', 'Autotools/20150215-GCCcore-4.9.3', 'Autotools/20150215-GCCcore-6.3.0', 'Autotools/20150215-intel-2016a', 'Biggus/0.13.0-intel-2016a-Python-2.7.11', 'Biggus/0.13.0-intel-2016a-Python-3.5.1', 'Biggus/0.14.0-intel-2016a-Python-2.7.11', 'Biggus/0.14.0-intel-2016a-Python-3.5.1', 'Biggus/0.15.0-intel-2017a-Python-3.6.1', 'Bison/3.0.4', 'Bison/3.0.4-GCCcore-4.9.3', 'Bison/3.0.4-GCCcore-6.3.0', 'Bison/3.0.4-foss-2016a', 'Bison/3.0.4-intel-2016a', 'Blosc/1.11.1-intel-2016a', 'Blosc/1.12.1-intel-2017a', 'Boost/1.60.0-foss-2016a', 'Boost/1.63.0-intel-2017a-Python-2.7.13', 'CDO/1.7.2-intel-2016a', 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== 2017-10-06 15:43:36,702 modules.py:434 DEBUG Cached result for 'module avail' with key '('MODULEPATH=/home/eb/modules/all', 'lmod', '--show-hidden')': ['AMOS/3.1.0-intel-2016a', 'ANTLR/2.7.7-intel-2016a-Python-2.7.11', 'Autoconf/2.69', 'Autoconf/2.69-GCCcore-4.9.3', 'Autoconf/2.69-GCCcore-6.3.0', 'Autoconf/2.69-intel-2016a', 'Automake/1.15', 'Automake/1.15-GCCcore-4.9.3', 'Automake/1.15-GCCcore-6.3.0', 'Automake/1.15-intel-2016a', 'Autotools/20150215', 'Autotools/20150215-GCCcore-4.9.3', 'Autotools/20150215-GCCcore-6.3.0', 'Autotools/20150215-intel-2016a', 'Biggus/0.13.0-intel-2016a-Python-2.7.11', 'Biggus/0.13.0-intel-2016a-Python-3.5.1', 'Biggus/0.14.0-intel-2016a-Python-2.7.11', 'Biggus/0.14.0-intel-2016a-Python-3.5.1', 'Biggus/0.15.0-intel-2017a-Python-3.6.1', 'Bison/3.0.4', 'Bison/3.0.4-GCCcore-4.9.3', 'Bison/3.0.4-GCCcore-6.3.0', 'Bison/3.0.4-foss-2016a', 'Bison/3.0.4-intel-2016a', 'Blosc/1.11.1-intel-2016a', 'Blosc/1.12.1-intel-2017a', 'Boost/1.60.0-foss-2016a', 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'wcwidth/0.1.7-intel-2016a-Python-2.7.11', 'wcwidth/0.1.7-intel-2016a-Python-3.5.1', 'wheel/0.29.0-intel-2016a-Python-3.5.1', 'wrapt/1.10.8-intel-2016a-Python-2.7.11', 'wrapt/1.10.8-intel-2016a-Python-3.5.1', 'wrf-python/1.0.3-intel-2017a-Python-3.6.1', 'wrf-python/1.0b3-intel-2016a-Python-2.7.11', 'wrf-python/1.0b3-intel-2016a-Python-3.5.1', 'x264/20160430-intel-2016a', 'x264/20170817-intel-2017a', 'x265/2.4-intel-2017a', 'x265/2.5-intel-2017a', 'xcb-proto/1.11', 'xextproto/7.3.0-intel-2016a', 'xorg-macros/1.19.0-intel-2016a', 'xproto/7.0.28-intel-2016a', 'xtrans/1.3.5-intel-2016a', 'zlib/1.2.11-GCCcore-6.3.0', 'zlib/1.2.8', 'zlib/1.2.8-GCCcore-4.9.3', 'zlib/1.2.8-GCCcore-6.3.0', 'zlib/1.2.8-foss-2016a', 'zlib/1.2.8-intel-2016a']
== 2017-10-06 15:43:36,703 easyconfig.py:608 DEBUG Dependencies BEFORE filtering: [{'external_module_metadata': {}, 'full_mod_name': 'netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18', 'toolchain': {'version': '2017a', 'name': 'intel'}, 'name': 'netCDF', 'dummy': False, 'short_mod_name': 'netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18', 'external_module': False, 'versionsuffix': '-HDF5-1.8.18', 'version': '4.4.1.1', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18', 'toolchain': {'version': '2017a', 'name': 'intel'}, 'name': 'netCDF-Fortran', 'dummy': False, 'short_mod_name': 'netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18', 'external_module': False, 'versionsuffix': '-HDF5-1.8.18', 'version': '4.4.4', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18', 'toolchain': {'version': '2017a', 'name': 'intel'}, 'name': 'netCDF-C++4', 'dummy': False, 'short_mod_name': 'netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18', 'external_module': False, 'versionsuffix': '-HDF5-1.8.18', 'version': '4.3.0', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}]
== 2017-10-06 15:43:36,703 easyblock.py:2419 INFO Running method make_builddir part of step ready
== 2017-10-06 15:43:36,704 easyblock.py:814 DEBUG Creating the build directory /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18 (cleanup: True)
== 2017-10-06 15:43:36,704 easyblock.py:870 INFO Found old directory /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18
== 2017-10-06 15:43:36,731 filetools.py:1167 INFO Path /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18 successfully removed.
== 2017-10-06 15:43:36,731 easyblock.py:877 INFO Removed old directory /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18
== 2017-10-06 15:43:36,731 filetools.py:1071 INFO Creating directory /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18 (parents: True, set_gid: True, sticky: False)
== 2017-10-06 15:43:36,731 filetools.py:953 INFO Adjusting permissions recursively for /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18
== 2017-10-06 15:43:36,732 easyblock.py:2419 INFO Running method env_reset_changes part of step ready
== 2017-10-06 15:43:36,732 easyblock.py:2419 INFO Running method handle_iterate_opts part of step ready
== 2017-10-06 15:43:36,732 easyblock.py:2408 DEBUG Not skipping source step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False
== 2017-10-06 15:43:36,732 build_log.py:232 INFO unpacking...
== 2017-10-06 15:43:36,732 easyblock.py:2416 INFO Starting source step
== 2017-10-06 15:43:36,732 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,732 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:36,732 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:36,732 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:36,733 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:36,733 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:36,733 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:36,733 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,733 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:36,733 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:36,733 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:36,733 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:36,733 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:36,733 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:36,734 easyblock.py:2419 INFO Running method checksum_step part of step source
== 2017-10-06 15:43:36,734 easyblock.py:1641 INFO Checksum verification for /home/eb/sources/e/ESMF/esmf_6_3_0rp1_src.tar.gz using None passed.
== 2017-10-06 15:43:36,734 easyblock.py:1641 INFO Checksum verification for /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch using None passed.
== 2017-10-06 15:43:36,734 easyblock.py:1641 INFO Checksum verification for /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch using None passed.
== 2017-10-06 15:43:36,734 easyblock.py:2419 INFO Running method extract_step part of step source
== 2017-10-06 15:43:36,734 easyblock.py:1648 INFO Unpacking source esmf_6_3_0rp1_src.tar.gz
== 2017-10-06 15:43:36,734 filetools.py:1099 DEBUG Not creating existing path /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18
== 2017-10-06 15:43:36,734 filetools.py:271 DEBUG Unpacking /home/eb/sources/e/ESMF/esmf_6_3_0rp1_src.tar.gz in directory /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18.
== 2017-10-06 15:43:36,735 run.py:159 DEBUG run_cmd: running cmd tar xzf /home/eb/sources/e/ESMF/esmf_6_3_0rp1_src.tar.gz (in /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18)
== 2017-10-06 15:43:36,735 run.py:179 INFO running cmd: tar xzf /home/eb/sources/e/ESMF/esmf_6_3_0rp1_src.tar.gz
== 2017-10-06 15:43:36,954 run.py:464 DEBUG cmd "tar xzf /home/eb/sources/e/ESMF/esmf_6_3_0rp1_src.tar.gz" exited with exitcode 0 and output:
== 2017-10-06 15:43:36,954 run.py:508 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w)
== 2017-10-06 15:43:36,955 filetools.py:686 DEBUG Last dir list ['src', 'scripts', 'makefile', 'build_config', 'build', 'README', 'LICENSE']
== 2017-10-06 15:43:36,955 filetools.py:687 DEBUG Possible new dir /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf found
== 2017-10-06 15:43:36,955 easyblock.py:2408 DEBUG Not skipping patch step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False
== 2017-10-06 15:43:36,955 build_log.py:232 INFO patching...
== 2017-10-06 15:43:36,955 easyblock.py:2416 INFO Starting patch step
== 2017-10-06 15:43:36,955 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,955 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:36,956 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:36,956 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:36,956 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:36,956 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:36,956 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:36,956 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,956 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:36,956 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:36,956 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:36,957 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:36,957 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:36,957 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:36,957 easyblock.py:2419 INFO Running method patch_step part of step patch
== 2017-10-06 15:43:36,957 easyblock.py:1660 INFO Applying patch ESMF-6.1.1_libopts.patch
== 2017-10-06 15:43:36,957 easyblock.py:1673 DEBUG Source index: 0; patch level: None; source path suffix: ; copy patch: <module 'copy' from '/usr/lib64/python2.7/copy.pyo'>
== 2017-10-06 15:43:36,957 easyblock.py:1678 DEBUG Determine begin path for patch ESMF-6.1.1_libopts.patch: /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:36,957 easyblock.py:1687 DEBUG Applying patch {'path': '/home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch', 'md5': '4e0f59a1bca240555742f5cc91736b78', 'name': 'ESMF-6.1.1_libopts.patch', 'sha256': '3851627f07c32a7da55d99072d619942bd3a1d9dd002e1557716158e7aacdaf4', 'checksum': None} in path /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:36,958 filetools.py:876 DEBUG Guessed patch level 1 for patch /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch
== 2017-10-06 15:43:36,958 run.py:159 DEBUG run_cmd: running cmd patch -b -p1 -i /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch (in /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf)
== 2017-10-06 15:43:36,958 run.py:179 INFO running cmd: patch -b -p1 -i /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch
== 2017-10-06 15:43:36,968 run.py:464 DEBUG cmd "patch -b -p1 -i /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.1.1_libopts.patch" exited with exitcode 0 and output:
patching file build/common.mk
Hunk #1 succeeded at 933 with fuzz 2 (offset 37 lines).
== 2017-10-06 15:43:36,969 run.py:508 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w)
== 2017-10-06 15:43:36,969 easyblock.py:1660 INFO Applying patch ESMF-6.3.0rp1_fix-file-open-test.patch
== 2017-10-06 15:43:36,969 easyblock.py:1673 DEBUG Source index: 0; patch level: None; source path suffix: ; copy patch: <module 'copy' from '/usr/lib64/python2.7/copy.pyo'>
== 2017-10-06 15:43:36,969 easyblock.py:1683 DEBUG Using specified begin path for patch ESMF-6.3.0rp1_fix-file-open-test.patch: /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:36,969 easyblock.py:1687 DEBUG Applying patch {'path': '/home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch', 'md5': '3dcdce804aed2de23a8921647ba40d18', 'name': 'ESMF-6.3.0rp1_fix-file-open-test.patch', 'sha256': '3e209c21020c9bb8b11149ba182e64968308493f3f8e882cd43f59644c09b4ff', 'checksum': None} in path /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:36,969 filetools.py:876 DEBUG Guessed patch level 0 for patch /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch
== 2017-10-06 15:43:36,970 run.py:159 DEBUG run_cmd: running cmd patch -b -p0 -i /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch (in /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf)
== 2017-10-06 15:43:36,970 run.py:179 INFO running cmd: patch -b -p0 -i /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch
== 2017-10-06 15:43:36,978 run.py:464 DEBUG cmd "patch -b -p0 -i /home/hilboll/eb/repos/easybuild-easyconfigs/easybuild/easyconfigs/e/ESMF/ESMF-6.3.0rp1_fix-file-open-test.patch" exited with exitcode 0 and output:
patching file src/Infrastructure/Mesh/src/Moab/io/ReadABAQUS.cpp
== 2017-10-06 15:43:36,979 run.py:508 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w)
== 2017-10-06 15:43:36,979 easyblock.py:2408 DEBUG Not skipping prepare step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False
== 2017-10-06 15:43:36,979 build_log.py:232 INFO preparing...
== 2017-10-06 15:43:36,979 easyblock.py:2416 INFO Starting prepare step
== 2017-10-06 15:43:36,979 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,979 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:36,979 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:36,980 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:36,980 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:36,980 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:36,980 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:36,980 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:36,980 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:36,980 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:36,980 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:36,980 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:36,981 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:36,981 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:36,981 easyblock.py:2419 INFO Running method prepare_step part of step prepare
== 2017-10-06 15:43:36,981 modules.py:641 DEBUG Current MODULEPATH: /home/eb/modules/all
== 2017-10-06 15:43:36,981 modules.py:648 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2017-10-06 15:43:36,981 modules.py:648 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2017-10-06 15:43:36,981 modules.py:652 DEBUG Running module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python show intel/2017a' from /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:37,067 modules.py:658 DEBUG Output of module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python show intel/2017a': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "Yi9tb2R1bGVmaWxlcyIsWyJ2ZXJzaW9uIl09Mix9";
os.environ["_ModuleTable_Sz_"] = "2";
; stderr: ----------------------------------------------------------------------------
/home/eb/modules/all/intel/2017a.lua:
----------------------------------------------------------------------------
help([[Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL. - Homepage: http://software.intel.com/en-us/intel-cluster-toolkit-compiler/]])
whatis("Description: Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL. - Homepage: http://software.intel.com/en-us/intel-cluster-toolkit-compiler/")
conflict("intel")
load("GCCcore/6.3.0")
load("binutils/2.27-GCCcore-6.3.0")
load("icc/2017.1.132-GCC-6.3.0-2.27")
load("ifort/2017.1.132-GCC-6.3.0-2.27")
load("impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27")
load("imkl/2017.1.132-iimpi-2017a")
setenv("EBROOTINTEL","/home/eb/software/intel/2017a")
setenv("EBVERSIONINTEL","2017a")
setenv("EBDEVELINTEL","/home/eb/software/intel/2017a/easybuild/intel-2017a-easybuild-devel")
== 2017-10-06 15:43:37,068 modules.py:1109 DEBUG Output found in stdout, seems like '/opt/ohpc/admin/lmod/lmod/libexec/lmod python show intel/2017a' ran fine
== 2017-10-06 15:43:37,068 modules.py:546 DEBUG Cached result for 'module show intel/2017a' with key '('MODULEPATH=/home/eb/modules/all', 'lmod', 'intel/2017a')': os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "Yi9tb2R1bGVmaWxlcyIsWyJ2ZXJzaW9uIl09Mix9";
os.environ["_ModuleTable_Sz_"] = "2";
----------------------------------------------------------------------------
/home/eb/modules/all/intel/2017a.lua:
----------------------------------------------------------------------------
help([[Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL. - Homepage: http://software.intel.com/en-us/intel-cluster-toolkit-compiler/]])
whatis("Description: Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL. - Homepage: http://software.intel.com/en-us/intel-cluster-toolkit-compiler/")
conflict("intel")
load("GCCcore/6.3.0")
load("binutils/2.27-GCCcore-6.3.0")
load("icc/2017.1.132-GCC-6.3.0-2.27")
load("ifort/2017.1.132-GCC-6.3.0-2.27")
load("impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27")
load("imkl/2017.1.132-iimpi-2017a")
setenv("EBROOTINTEL","/home/eb/software/intel/2017a")
setenv("EBVERSIONINTEL","2017a")
setenv("EBDEVELINTEL","/home/eb/software/intel/2017a/easybuild/intel-2017a-easybuild-devel")
== 2017-10-06 15:43:37,068 toolchain.py:580 DEBUG Loading toolchain module and dependencies...
== 2017-10-06 15:43:37,068 toolchain.py:495 DEBUG Loading module for toolchain: intel/2017a
== 2017-10-06 15:43:37,068 modules.py:641 DEBUG Current MODULEPATH: /home/eb/modules/all
== 2017-10-06 15:43:37,069 modules.py:648 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2017-10-06 15:43:37,069 modules.py:648 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2017-10-06 15:43:37,069 modules.py:652 DEBUG Running module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse list' from /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:37,097 modules.py:658 DEBUG Output of module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse list': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "Yi9tb2R1bGVmaWxlcyIsWyJ2ZXJzaW9uIl09Mix9";
os.environ["_ModuleTable_Sz_"] = "2";
; stderr: EasyBuild/3.4.0
== 2017-10-06 15:43:37,097 modules.py:1109 DEBUG Output found in stdout, seems like '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse list' ran fine
== 2017-10-06 15:43:37,098 modules.py:695 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to []
== 2017-10-06 15:43:37,098 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '')
== 2017-10-06 15:43:37,098 modules.py:695 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2017-10-06 15:43:37,098 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
== 2017-10-06 15:43:37,098 modules.py:641 DEBUG Current MODULEPATH: /home/eb/modules/all
== 2017-10-06 15:43:37,098 modules.py:648 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2017-10-06 15:43:37,099 modules.py:648 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2017-10-06 15:43:37,099 modules.py:652 DEBUG Running module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load intel/2017a' from /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:37,204 modules.py:658 DEBUG Output of module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load intel/2017a': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["CPATH"] = "/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include/fftw:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/include64:/home/eb/software/binutils/2.27-GCCcore-6.3.0/include:/home/eb/software/GCCcore/6.3.0/include";
os.environ["EBDEVELBINUTILS"] = "/home/eb/software/binutils/2.27-GCCcore-6.3.0/easybuild/binutils-2.27-GCCcore-6.3.0-easybuild-devel";
os.environ["EBDEVELGCCCORE"] = "/home/eb/software/GCCcore/6.3.0/easybuild/GCCcore-6.3.0-easybuild-devel";
os.environ["EBDEVELICC"] = "/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/easybuild/icc-2017.1.132-GCC-6.3.0-2.27-easybuild-devel";
os.environ["EBDEVELICCIFORT"] = "/home/eb/software/iccifort/2017.1.132-GCC-6.3.0-2.27/easybuild/iccifort-2017.1.132-GCC-6.3.0-2.27-easybuild-devel";
os.environ["EBDEVELIFORT"] = "/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/easybuild/ifort-2017.1.132-GCC-6.3.0-2.27-easybuild-devel";
os.environ["EBDEVELIIMPI"] = "/home/eb/software/iimpi/2017a/easybuild/iimpi-2017a-easybuild-devel";
os.environ["EBDEVELIMKL"] = "/home/eb/software/imkl/2017.1.132-iimpi-2017a/easybuild/imkl-2017.1.132-iimpi-2017a-easybuild-devel";
os.environ["EBDEVELIMPI"] = "/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/easybuild/impi-2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27-easybuild-devel";
os.environ["EBDEVELINTEL"] = "/home/eb/software/intel/2017a/easybuild/intel-2017a-easybuild-devel";
os.environ["EBROOTBINUTILS"] = "/home/eb/software/binutils/2.27-GCCcore-6.3.0";
os.environ["EBROOTGCCCORE"] = "/home/eb/software/GCCcore/6.3.0";
os.environ["EBROOTICC"] = "/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27";
os.environ["EBROOTICCIFORT"] = "/home/eb/software/iccifort/2017.1.132-GCC-6.3.0-2.27";
os.environ["EBROOTIFORT"] = "/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27";
os.environ["EBROOTIIMPI"] = "/home/eb/software/iimpi/2017a";
os.environ["EBROOTIMKL"] = "/home/eb/software/imkl/2017.1.132-iimpi-2017a";
os.environ["EBROOTIMPI"] = "/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27";
os.environ["EBROOTINTEL"] = "/home/eb/software/intel/2017a";
os.environ["EBVERSIONBINUTILS"] = "2.27";
os.environ["EBVERSIONGCCCORE"] = "6.3.0";
os.environ["EBVERSIONICC"] = "2017.1.132";
os.environ["EBVERSIONICCIFORT"] = "2017.1.132";
os.environ["EBVERSIONIFORT"] = "2017.1.132";
os.environ["EBVERSIONIIMPI"] = "2017a";
os.environ["EBVERSIONIMKL"] = "2017.1.132";
os.environ["EBVERSIONIMPI"] = "2017.1.132";
os.environ["EBVERSIONINTEL"] = "2017a";
os.environ["IDB_HOME"] = "/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64";
os.environ["INTEL_LICENSE_FILE"] = "28518@xcat";
os.environ["INTEL_PYTHONHOME"] = "/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/python/intel64";
os.environ["I_MPI_ROOT"] = "/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27";
os.environ["LD_LIBRARY_PATH"] = "/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib";
os.environ["LIBRARY_PATH"] = "/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["LOADEDMODULES"] = "EasyBuild/3.4.0:GCCcore/6.3.0:binutils/2.27-GCCcore-6.3.0:icc/2017.1.132-GCC-6.3.0-2.27:ifort/2017.1.132-GCC-6.3.0-2.27:iccifort/2017.1.132-GCC-6.3.0-2.27:impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27:iimpi/2017a:imkl/2017.1.132-iimpi-2017a:intel/2017a";
os.environ["MANPATH"] = "/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man/common:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/man/common:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/man:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man/common:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/man/common:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/man:/home/eb/software/binutils/2.27-GCCcore-6.3.0/share/man:/home/eb/software/GCCcore/6.3.0/share/man:/usr/local/share/man:/usr/share/man/overrides:/usr/share/man";
os.environ["MIC_LD_LIBRARY_PATH"] = "/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/mic:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64_lin_mic:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/mic/lib";
os.environ["MKLROOT"] = "/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl";
os.environ["MKL_EXAMPLES"] = "/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/examples/";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["NLSPATH"] = "/home/eb/software/imkl/2017.1.132-iimpi-2017a/idb/intel64/locale/%l_%t/%N:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/idb/intel64/locale/%l_%t/%N:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/idb/intel64/locale/%l_%t/%N:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/idb/intel64/locale/%l_%t/%N";
os.environ["PATH"] = "/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/bin:/home/eb/software/imkl/2017.1.132-iimpi-2017a/bin:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/bin64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/gdb/intel64/bin:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/gdb/intel64/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/bin:/home/eb/software/binutils/2.27-GCCcore-6.3.0/bin:/home/eb/software/GCCcore/6.3.0/bin:/home/eb/software/EasyBuild/3.4.0/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/hilboll/.local/bin:/home/hilboll/bin";
os.environ["_LMFILES_"] = "/home/eb/modules/all/EasyBuild/3.4.0.lua:/home/eb/modules/all/GCCcore/6.3.0.lua:/home/eb/modules/all/binutils/2.27-GCCcore-6.3.0.lua:/home/eb/modules/all/icc/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/ifort/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/iccifort/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/iimpi/2017a.lua:/home/eb/modules/all/imkl/2017.1.132-iimpi-2017a.lua:/home/eb/modules/all/intel/2017a.lua";
os.environ["_ModuleTable001_"] = "X01vZHVsZVRhYmxlXz17WyJhY3RpdmVTaXplIl09MTAsYmFzZU1wYXRoQT17Ii9ob21lL2ViL21vZHVsZXMvYWxsIix9LFsiY19yZWJ1aWxkVGltZSJdPWZhbHNlLFsiY19zaG9ydFRpbWUiXT1mYWxzZSxmYW1pbHk9e30saW5hY3RpdmU9e30sbVQ9e0Vhc3lCdWlsZD17WyJGTiJdPSIvaG9tZS9lYi9tb2R1bGVzL2FsbC9FYXN5QnVpbGQvMy40LjAubHVhIixbImRlZmF1bHQiXT0xLFsiZnVsbE5hbWUiXT0iRWFzeUJ1aWxkLzMuNC4wIixbImxvYWRPcmRlciJdPTEscHJvcFQ9e30sWyJzaG9ydCJdPSJFYXN5QnVpbGQiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSxHQ0Njb3JlPXtbIkZOIl09Ii9ob21lL2ViL21vZHVsZXMvYWxsL0dDQ2NvcmUvNi4zLjAubHVhIixbImRlZmF1bHQi";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "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";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "ZGVmYXVsdCJdPTAsWyJmdWxsTmFtZSJdPSJpbnRlbC8yMDE3YSIsWyJsb2FkT3JkZXIiXT0xMCxwcm9wVD17fSxbInNob3J0Il09ImludGVsIixbInN0YXR1cyJdPSJhY3RpdmUiLH0sfSxtcGF0aEE9eyIvaG9tZS9lYi9tb2R1bGVzL2FsbCIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvb3B0L29ocGMvcHViL21vZHVsZWZpbGVzIixbInZlcnNpb24iXT0yLH0=";
os.environ["_ModuleTable_Sz_"] = "6";
; stderr:
== 2017-10-06 15:43:37,204 modules.py:1109 DEBUG Output found in stdout, seems like '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load intel/2017a' ran fine
== 2017-10-06 15:43:37,205 modules.py:695 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64', '/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64', '/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib', '/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0', '/home/eb/software/GCCcore/6.3.0/lib64', '/home/eb/software/GCCcore/6.3.0/lib'] to ['/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64', '/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64', '/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib', '/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0', '/home/eb/software/GCCcore/6.3.0/lib64', '/home/eb/software/GCCcore/6.3.0/lib']
== 2017-10-06 15:43:37,205 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib (previous value: '/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib')
== 2017-10-06 15:43:37,205 modules.py:695 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2017-10-06 15:43:37,206 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
== 2017-10-06 15:43:37,206 toolchain.py:525 DEBUG Loading modules for dependencies: ['netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18', 'netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18', 'netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18']
== 2017-10-06 15:43:37,206 modules.py:641 DEBUG Current MODULEPATH: /home/eb/modules/all
== 2017-10-06 15:43:37,206 modules.py:648 DEBUG Changing LD_LIBRARY_PATH from '/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib' to '' in environment for module command
== 2017-10-06 15:43:37,206 modules.py:648 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2017-10-06 15:43:37,206 modules.py:652 DEBUG Running module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse list' from /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:37,253 modules.py:658 DEBUG Output of module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse list': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "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";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "ZGVmYXVsdCJdPTAsWyJmdWxsTmFtZSJdPSJpbnRlbC8yMDE3YSIsWyJsb2FkT3JkZXIiXT0xMCxwcm9wVD17fSxbInNob3J0Il09ImludGVsIixbInN0YXR1cyJdPSJhY3RpdmUiLH0sfSxtcGF0aEE9eyIvaG9tZS9lYi9tb2R1bGVzL2FsbCIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvb3B0L29ocGMvcHViL21vZHVsZWZpbGVzIixbInZlcnNpb24iXT0yLH0=";
os.environ["_ModuleTable_Sz_"] = "6";
; stderr: EasyBuild/3.4.0
GCCcore/6.3.0
binutils/2.27-GCCcore-6.3.0
icc/2017.1.132-GCC-6.3.0-2.27
ifort/2017.1.132-GCC-6.3.0-2.27
iccifort/2017.1.132-GCC-6.3.0-2.27
impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27
iimpi/2017a
imkl/2017.1.132-iimpi-2017a
intel/2017a
== 2017-10-06 15:43:37,254 modules.py:1109 DEBUG Output found in stdout, seems like '/opt/ohpc/admin/lmod/lmod/libexec/lmod python --terse list' ran fine
== 2017-10-06 15:43:37,254 modules.py:695 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64', '/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64', '/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib', '/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0', '/home/eb/software/GCCcore/6.3.0/lib64', '/home/eb/software/GCCcore/6.3.0/lib'] to ['/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64', '/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64', '/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib', '/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0', '/home/eb/software/GCCcore/6.3.0/lib64', '/home/eb/software/GCCcore/6.3.0/lib']
== 2017-10-06 15:43:37,254 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib (previous value: '/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib')
== 2017-10-06 15:43:37,254 modules.py:695 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2017-10-06 15:43:37,254 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
== 2017-10-06 15:43:37,255 modules.py:641 DEBUG Current MODULEPATH: /home/eb/modules/all
== 2017-10-06 15:43:37,255 modules.py:648 DEBUG Changing LD_LIBRARY_PATH from '/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib' to '' in environment for module command
== 2017-10-06 15:43:37,255 modules.py:648 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2017-10-06 15:43:37,255 modules.py:652 DEBUG Running module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18' from /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:37,373 modules.py:658 DEBUG Output of module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["ACLOCAL_PATH"] = "/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/share/aclocal";
os.environ["CPATH"] = "/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/include:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/include:/home/eb/software/HDF5/1.8.18-intel-2017a/include:/home/eb/software/Szip/2.1-intel-2017a/include:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/include:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include/fftw:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/include64:/home/eb/software/binutils/2.27-GCCcore-6.3.0/include:/home/eb/software/GCCcore/6.3.0/include";
os.environ["CURL_INCLUDES"] = "/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/include";
os.environ["EBDEVELCURL"] = "/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/easybuild/cURL-7.53.1-GCCcore-6.3.0-easybuild-devel";
os.environ["EBDEVELHDF5"] = "/home/eb/software/HDF5/1.8.18-intel-2017a/easybuild/HDF5-1.8.18-intel-2017a-easybuild-devel";
os.environ["EBDEVELNETCDF"] = "/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/easybuild/netCDF-4.4.1.1-intel-2017a-HDF5-1.8.18-easybuild-devel";
os.environ["EBDEVELSZIP"] = "/home/eb/software/Szip/2.1-intel-2017a/easybuild/Szip-2.1-intel-2017a-easybuild-devel";
os.environ["EBDEVELZLIB"] = "/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/easybuild/zlib-1.2.11-GCCcore-6.3.0-easybuild-devel";
os.environ["EBROOTCURL"] = "/home/eb/software/cURL/7.53.1-GCCcore-6.3.0";
os.environ["EBROOTHDF5"] = "/home/eb/software/HDF5/1.8.18-intel-2017a";
os.environ["EBROOTNETCDF"] = "/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18";
os.environ["EBROOTSZIP"] = "/home/eb/software/Szip/2.1-intel-2017a";
os.environ["EBROOTZLIB"] = "/home/eb/software/zlib/1.2.11-GCCcore-6.3.0";
os.environ["EBVERSIONCURL"] = "7.53.1";
os.environ["EBVERSIONHDF5"] = "1.8.18";
os.environ["EBVERSIONNETCDF"] = "4.4.1.1";
os.environ["EBVERSIONSZIP"] = "2.1";
os.environ["EBVERSIONZLIB"] = "1.2.11";
os.environ["LD_LIBRARY_PATH"] = "/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib:/home/eb/software/HDF5/1.8.18-intel-2017a/lib:/home/eb/software/Szip/2.1-intel-2017a/lib:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib";
os.environ["LIBRARY_PATH"] = "/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib:/home/eb/software/HDF5/1.8.18-intel-2017a/lib:/home/eb/software/Szip/2.1-intel-2017a/lib:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["LOADEDMODULES"] = "EasyBuild/3.4.0:GCCcore/6.3.0:binutils/2.27-GCCcore-6.3.0:icc/2017.1.132-GCC-6.3.0-2.27:ifort/2017.1.132-GCC-6.3.0-2.27:iccifort/2017.1.132-GCC-6.3.0-2.27:impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27:iimpi/2017a:imkl/2017.1.132-iimpi-2017a:intel/2017a:zlib/1.2.11-GCCcore-6.3.0:Szip/2.1-intel-2017a:HDF5/1.8.18-intel-2017a:cURL/7.53.1-GCCcore-6.3.0:netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18";
os.environ["MANPATH"] = "/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/share/man:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/share/man:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/share/man:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man/common:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/man/common:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/man:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man/common:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/man/common:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/man:/home/eb/software/binutils/2.27-GCCcore-6.3.0/share/man:/home/eb/software/GCCcore/6.3.0/share/man:/usr/local/share/man:/usr/share/man/overrides:/usr/share/man";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["PATH"] = "/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/bin:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/bin:/home/eb/software/HDF5/1.8.18-intel-2017a/bin:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/bin:/home/eb/software/imkl/2017.1.132-iimpi-2017a/bin:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/bin64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/gdb/intel64/bin:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/gdb/intel64/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/bin:/home/eb/software/binutils/2.27-GCCcore-6.3.0/bin:/home/eb/software/GCCcore/6.3.0/bin:/home/eb/software/EasyBuild/3.4.0/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/hilboll/.local/bin:/home/hilboll/bin";
os.environ["PKG_CONFIG_PATH"] = "/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64/pkgconfig:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib/pkgconfig:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib/pkgconfig";
os.environ["_LMFILES_"] = "/home/eb/modules/all/EasyBuild/3.4.0.lua:/home/eb/modules/all/GCCcore/6.3.0.lua:/home/eb/modules/all/binutils/2.27-GCCcore-6.3.0.lua:/home/eb/modules/all/icc/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/ifort/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/iccifort/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/iimpi/2017a.lua:/home/eb/modules/all/imkl/2017.1.132-iimpi-2017a.lua:/home/eb/modules/all/intel/2017a.lua:/home/eb/modules/all/zlib/1.2.11-GCCcore-6.3.0.lua:/home/eb/modules/all/Szip/2.1-intel-2017a.lua:/home/eb/modules/all/HDF5/1.8.18-intel-2017a.lua:/home/eb/modules/all/cURL/7.53.1-GCCcore-6.3.0.lua:/home/eb/modules/all/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18.lua";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "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";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "WyJsb2FkT3JkZXIiXT04LHByb3BUPXt9LFsic2hvcnQiXT0iaWltcGkiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSxpbWtsPXtbIkZOIl09Ii9ob21lL2ViL21vZHVsZXMvYWxsL2lta2wvMjAxNy4xLjEzMi1paW1waS0yMDE3YS5sdWEiLFsiZGVmYXVsdCJdPTAsWyJmdWxsTmFtZSJdPSJpbWtsLzIwMTcuMS4xMzItaWltcGktMjAxN2EiLFsibG9hZE9yZGVyIl09OSxwcm9wVD17fSxbInNob3J0Il09Imlta2wiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSxpbXBpPXtbIkZOIl09Ii9ob21lL2ViL21vZHVsZXMvYWxsL2ltcGkvMjAxNy4xLjEzMi1pY2NpZm9ydC0yMDE3LjEuMTMyLUdDQy02LjMuMC0yLjI3Lmx1YSIsWyJkZWZhdWx0Il09MCxbImZ1bGxOYW1lIl09ImltcGkvMjAxNy4x";
os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "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";
os.environ["_ModuleTable_Sz_"] = "8";
; stderr:
== 2017-10-06 15:43:37,373 modules.py:1109 DEBUG Output found in stdout, seems like '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18' ran fine
== 2017-10-06 15:43:37,374 modules.py:695 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64', '/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib', '/home/eb/software/HDF5/1.8.18-intel-2017a/lib', '/home/eb/software/Szip/2.1-intel-2017a/lib', '/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib'] to ['/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64', '/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib', '/home/eb/software/HDF5/1.8.18-intel-2017a/lib', '/home/eb/software/Szip/2.1-intel-2017a/lib', '/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib', '/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64', '/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64', '/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib', '/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0', '/home/eb/software/GCCcore/6.3.0/lib64', '/home/eb/software/GCCcore/6.3.0/lib']
== 2017-10-06 15:43:37,374 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib:/home/eb/software/HDF5/1.8.18-intel-2017a/lib:/home/eb/software/Szip/2.1-intel-2017a/lib:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib (previous value: '/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib:/home/eb/software/HDF5/1.8.18-intel-2017a/lib:/home/eb/software/Szip/2.1-intel-2017a/lib:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib')
== 2017-10-06 15:43:37,374 modules.py:695 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2017-10-06 15:43:37,374 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
== 2017-10-06 15:43:37,374 modules.py:641 DEBUG Current MODULEPATH: /home/eb/modules/all
== 2017-10-06 15:43:37,375 modules.py:648 DEBUG Changing LD_LIBRARY_PATH from '/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib:/home/eb/software/HDF5/1.8.18-intel-2017a/lib:/home/eb/software/Szip/2.1-intel-2017a/lib:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib' to '' in environment for module command
== 2017-10-06 15:43:37,375 modules.py:648 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2017-10-06 15:43:37,375 modules.py:652 DEBUG Running module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18' from /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:37,495 modules.py:658 DEBUG Output of module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["CPATH"] = "/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/include:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/include:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/include:/home/eb/software/HDF5/1.8.18-intel-2017a/include:/home/eb/software/Szip/2.1-intel-2017a/include:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/include:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include/fftw:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/include64:/home/eb/software/binutils/2.27-GCCcore-6.3.0/include:/home/eb/software/GCCcore/6.3.0/include";
os.environ["EBDEVELNETCDFMINFORTRAN"] = "/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/easybuild/netCDF-Fortran-4.4.4-intel-2017a-HDF5-1.8.18-easybuild-devel";
os.environ["EBROOTNETCDFMINFORTRAN"] = "/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18";
os.environ["EBVERSIONNETCDFMINFORTRAN"] = "4.4.4";
os.environ["LD_LIBRARY_PATH"] = "/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib";
os.environ["LIBRARY_PATH"] = "/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib:/home/eb/software/HDF5/1.8.18-intel-2017a/lib:/home/eb/software/Szip/2.1-intel-2017a/lib:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["LOADEDMODULES"] = "EasyBuild/3.4.0:GCCcore/6.3.0:binutils/2.27-GCCcore-6.3.0:icc/2017.1.132-GCC-6.3.0-2.27:ifort/2017.1.132-GCC-6.3.0-2.27:iccifort/2017.1.132-GCC-6.3.0-2.27:impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27:iimpi/2017a:imkl/2017.1.132-iimpi-2017a:intel/2017a:zlib/1.2.11-GCCcore-6.3.0:Szip/2.1-intel-2017a:HDF5/1.8.18-intel-2017a:cURL/7.53.1-GCCcore-6.3.0:netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18:netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18";
os.environ["MANPATH"] = "/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/share/man:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/share/man:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/share/man:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/share/man:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man/common:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/man/common:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/man:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man/common:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/man:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/man/common:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/man:/home/eb/software/binutils/2.27-GCCcore-6.3.0/share/man:/home/eb/software/GCCcore/6.3.0/share/man:/usr/local/share/man:/usr/share/man/overrides:/usr/share/man";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["PATH"] = "/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/bin:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/bin:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/bin:/home/eb/software/HDF5/1.8.18-intel-2017a/bin:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/bin:/home/eb/software/imkl/2017.1.132-iimpi-2017a/bin:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/bin64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/gdb/intel64/bin:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/gdb/intel64/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/bin:/home/eb/software/binutils/2.27-GCCcore-6.3.0/bin:/home/eb/software/GCCcore/6.3.0/bin:/home/eb/software/EasyBuild/3.4.0/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/hilboll/.local/bin:/home/hilboll/bin";
os.environ["PKG_CONFIG_PATH"] = "/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib/pkgconfig:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64/pkgconfig:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib/pkgconfig:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib/pkgconfig";
os.environ["_LMFILES_"] = "/home/eb/modules/all/EasyBuild/3.4.0.lua:/home/eb/modules/all/GCCcore/6.3.0.lua:/home/eb/modules/all/binutils/2.27-GCCcore-6.3.0.lua:/home/eb/modules/all/icc/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/ifort/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/iccifort/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/iimpi/2017a.lua:/home/eb/modules/all/imkl/2017.1.132-iimpi-2017a.lua:/home/eb/modules/all/intel/2017a.lua:/home/eb/modules/all/zlib/1.2.11-GCCcore-6.3.0.lua:/home/eb/modules/all/Szip/2.1-intel-2017a.lua:/home/eb/modules/all/HDF5/1.8.18-intel-2017a.lua:/home/eb/modules/all/cURL/7.53.1-GCCcore-6.3.0.lua:/home/eb/modules/all/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18.lua:/home/eb/modules/all/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18.lua";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "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";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "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";
os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "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";
os.environ["_ModuleTable009_"] = "LzEuMi4xMS1HQ0Njb3JlLTYuMy4wLmx1YSIsWyJkZWZhdWx0Il09MCxbImZ1bGxOYW1lIl09InpsaWIvMS4yLjExLUdDQ2NvcmUtNi4zLjAiLFsibG9hZE9yZGVyIl09MTEscHJvcFQ9e30sWyJzaG9ydCJdPSJ6bGliIixbInN0YXR1cyJdPSJhY3RpdmUiLH0sfSxtcGF0aEE9eyIvaG9tZS9lYi9tb2R1bGVzL2FsbCIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvb3B0L29ocGMvcHViL21vZHVsZWZpbGVzIixbInZlcnNpb24iXT0yLH0=";
os.environ["_ModuleTable_Sz_"] = "9";
; stderr:
== 2017-10-06 15:43:37,495 modules.py:1109 DEBUG Output found in stdout, seems like '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18' ran fine
== 2017-10-06 15:43:37,496 modules.py:695 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib'] to ['/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib', '/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64', '/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib', '/home/eb/software/HDF5/1.8.18-intel-2017a/lib', '/home/eb/software/Szip/2.1-intel-2017a/lib', '/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib', '/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64', '/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64', '/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib', '/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0', '/home/eb/software/GCCcore/6.3.0/lib64', '/home/eb/software/GCCcore/6.3.0/lib']
== 2017-10-06 15:43:37,496 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib:/home/eb/software/HDF5/1.8.18-intel-2017a/lib:/home/eb/software/Szip/2.1-intel-2017a/lib:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib (previous value: '/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib')
== 2017-10-06 15:43:37,496 modules.py:695 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2017-10-06 15:43:37,496 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
== 2017-10-06 15:43:37,496 modules.py:641 DEBUG Current MODULEPATH: /home/eb/modules/all
== 2017-10-06 15:43:37,496 modules.py:648 DEBUG Changing LD_LIBRARY_PATH from '/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib:/home/eb/software/HDF5/1.8.18-intel-2017a/lib:/home/eb/software/Szip/2.1-intel-2017a/lib:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib' to '' in environment for module command
== 2017-10-06 15:43:37,497 modules.py:648 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2017-10-06 15:43:37,497 modules.py:652 DEBUG Running module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18' from /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf
== 2017-10-06 15:43:37,618 modules.py:658 DEBUG Output of module command '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["CPATH"] = "/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/include:/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/include:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/include:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/include:/home/eb/software/HDF5/1.8.18-intel-2017a/include:/home/eb/software/Szip/2.1-intel-2017a/include:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/include:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include/fftw:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/include64:/home/eb/software/binutils/2.27-GCCcore-6.3.0/include:/home/eb/software/GCCcore/6.3.0/include";
os.environ["EBDEVELNETCDFMINCPLUSPLUS4"] = "/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/easybuild/netCDF-C++4-4.3.0-intel-2017a-HDF5-1.8.18-easybuild-devel";
os.environ["EBROOTNETCDFMINCPLUSPLUS4"] = "/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18";
os.environ["EBVERSIONNETCDFMINCPLUSPLUS4"] = "4.3.0";
os.environ["LD_LIBRARY_PATH"] = "/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib";
os.environ["LIBRARY_PATH"] = "/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib:/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib:/home/eb/software/HDF5/1.8.18-intel-2017a/lib:/home/eb/software/Szip/2.1-intel-2017a/lib:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["LOADEDMODULES"] = "EasyBuild/3.4.0:GCCcore/6.3.0:binutils/2.27-GCCcore-6.3.0:icc/2017.1.132-GCC-6.3.0-2.27:ifort/2017.1.132-GCC-6.3.0-2.27:iccifort/2017.1.132-GCC-6.3.0-2.27:impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27:iimpi/2017a:imkl/2017.1.132-iimpi-2017a:intel/2017a:zlib/1.2.11-GCCcore-6.3.0:Szip/2.1-intel-2017a:HDF5/1.8.18-intel-2017a:cURL/7.53.1-GCCcore-6.3.0:netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18:netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18:netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["PATH"] = "/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/bin:/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/bin:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/bin:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/bin:/home/eb/software/HDF5/1.8.18-intel-2017a/bin:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/bin:/home/eb/software/imkl/2017.1.132-iimpi-2017a/bin:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/bin64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/gdb/intel64/bin:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/gdb/intel64/bin:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/bin:/home/eb/software/binutils/2.27-GCCcore-6.3.0/bin:/home/eb/software/GCCcore/6.3.0/bin:/home/eb/software/EasyBuild/3.4.0/bin:/usr/lib64/qt-3.3/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/hilboll/.local/bin:/home/hilboll/bin";
os.environ["PKG_CONFIG_PATH"] = "/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib/pkgconfig:/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib/pkgconfig:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64/pkgconfig:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib/pkgconfig:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib/pkgconfig";
os.environ["_LMFILES_"] = "/home/eb/modules/all/EasyBuild/3.4.0.lua:/home/eb/modules/all/GCCcore/6.3.0.lua:/home/eb/modules/all/binutils/2.27-GCCcore-6.3.0.lua:/home/eb/modules/all/icc/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/ifort/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/iccifort/2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27.lua:/home/eb/modules/all/iimpi/2017a.lua:/home/eb/modules/all/imkl/2017.1.132-iimpi-2017a.lua:/home/eb/modules/all/intel/2017a.lua:/home/eb/modules/all/zlib/1.2.11-GCCcore-6.3.0.lua:/home/eb/modules/all/Szip/2.1-intel-2017a.lua:/home/eb/modules/all/HDF5/1.8.18-intel-2017a.lua:/home/eb/modules/all/cURL/7.53.1-GCCcore-6.3.0.lua:/home/eb/modules/all/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18.lua:/home/eb/modules/all/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18.lua:/home/eb/modules/all/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18.lua";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "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";
os.environ["_ModuleTable004_"] = "LTYuMy4wIixbImxvYWRPcmRlciJdPTE0LHByb3BUPXt9LFsic2hvcnQiXT0iY1VSTCIsWyJzdGF0dXMiXT0iYWN0aXZlIix9LGljYz17WyJGTiJdPSIvaG9tZS9lYi9tb2R1bGVzL2FsbC9pY2MvMjAxNy4xLjEzMi1HQ0MtNi4zLjAtMi4yNy5sdWEiLFsiZGVmYXVsdCJdPTAsWyJmdWxsTmFtZSJdPSJpY2MvMjAxNy4xLjEzMi1HQ0MtNi4zLjAtMi4yNyIsWyJsb2FkT3JkZXIiXT00LHByb3BUPXt9LFsic2hvcnQiXT0iaWNjIixbInN0YXR1cyJdPSJhY3RpdmUiLH0saWNjaWZvcnQ9e1siRk4iXT0iL2hvbWUvZWIvbW9kdWxlcy9hbGwvaWNjaWZvcnQvMjAxNy4xLjEzMi1HQ0MtNi4zLjAtMi4yNy5sdWEiLFsiZGVmYXVsdCJdPTAsWyJmdWxsTmFtZSJdPSJpY2NpZm9ydC8yMDE3";
os.environ["_ModuleTable005_"] = "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";
os.environ["_ModuleTable006_"] = "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";
os.environ["_ModuleTable007_"] = "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";
os.environ["_ModuleTable008_"] = "LjEuMS1pbnRlbC0yMDE3YS1IREY1LTEuOC4xOCIsWyJsb2FkT3JkZXIiXT0xNSxwcm9wVD17fSxbInNob3J0Il09Im5ldENERiIsWyJzdGF0dXMiXT0iYWN0aXZlIix9LFsibmV0Q0RGLUMrKzQiXT17WyJGTiJdPSIvaG9tZS9lYi9tb2R1bGVzL2FsbC9uZXRDREYtQysrNC80LjMuMC1pbnRlbC0yMDE3YS1IREY1LTEuOC4xOC5sdWEiLFsiZGVmYXVsdCJdPTAsWyJmdWxsTmFtZSJdPSJuZXRDREYtQysrNC80LjMuMC1pbnRlbC0yMDE3YS1IREY1LTEuOC4xOCIsWyJsb2FkT3JkZXIiXT0xNyxwcm9wVD17fSxbInNob3J0Il09Im5ldENERi1DKys0IixbInN0YXR1cyJdPSJhY3RpdmUiLH0sWyJuZXRDREYtRm9ydHJhbiJdPXtbIkZOIl09Ii9ob21lL2ViL21vZHVsZXMvYWxsL25l";
os.environ["_ModuleTable009_"] = "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";
os.environ["_ModuleTable010_"] = "LG1wYXRoQT17Ii9ob21lL2ViL21vZHVsZXMvYWxsIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9vcHQvb2hwYy9wdWIvbW9kdWxlZmlsZXMiLFsidmVyc2lvbiJdPTIsfQ==";
os.environ["_ModuleTable_Sz_"] = "10";
; stderr:
== 2017-10-06 15:43:37,619 modules.py:1109 DEBUG Output found in stdout, seems like '/opt/ohpc/admin/lmod/lmod/libexec/lmod python load netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18' ran fine
== 2017-10-06 15:43:37,619 modules.py:695 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib'] to ['/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib', '/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib', '/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64', '/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib', '/home/eb/software/HDF5/1.8.18-intel-2017a/lib', '/home/eb/software/Szip/2.1-intel-2017a/lib', '/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib', '/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64', '/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64', '/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib', '/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib', '/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib', '/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0', '/home/eb/software/GCCcore/6.3.0/lib64', '/home/eb/software/GCCcore/6.3.0/lib']
== 2017-10-06 15:43:37,619 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib:/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib:/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64:/home/eb/software/cURL/7.53.1-GCCcore-6.3.0/lib:/home/eb/software/HDF5/1.8.18-intel-2017a/lib:/home/eb/software/Szip/2.1-intel-2017a/lib:/home/eb/software/zlib/1.2.11-GCCcore-6.3.0/lib:/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64:/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib/intel64:/home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/compiler/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/debugger_2017/libipt/intel64/lib:/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib:/home/eb/software/binutils/2.27-GCCcore-6.3.0/lib:/home/eb/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/home/eb/software/GCCcore/6.3.0/lib64:/home/eb/software/GCCcore/6.3.0/lib (previous value: '/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib')
== 2017-10-06 15:43:37,619 modules.py:695 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2017-10-06 15:43:37,619 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '')
== 2017-10-06 15:43:37,620 modules.py:542 DEBUG Found cached result for 'module show intel/2017a' with key '('MODULEPATH=/home/eb/modules/all', 'lmod', 'intel/2017a')': os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "Yi9tb2R1bGVmaWxlcyIsWyJ2ZXJzaW9uIl09Mix9";
os.environ["_ModuleTable_Sz_"] = "2";
----------------------------------------------------------------------------
/home/eb/modules/all/intel/2017a.lua:
----------------------------------------------------------------------------
help([[Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL. - Homepage: http://software.intel.com/en-us/intel-cluster-toolkit-compiler/]])
whatis("Description: Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL. - Homepage: http://software.intel.com/en-us/intel-cluster-toolkit-compiler/")
conflict("intel")
load("GCCcore/6.3.0")
load("binutils/2.27-GCCcore-6.3.0")
load("icc/2017.1.132-GCC-6.3.0-2.27")
load("ifort/2017.1.132-GCC-6.3.0-2.27")
load("impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27")
load("imkl/2017.1.132-iimpi-2017a")
setenv("EBROOTINTEL","/home/eb/software/intel/2017a")
setenv("EBVERSIONINTEL","2017a")
setenv("EBDEVELINTEL","/home/eb/software/intel/2017a/easybuild/intel-2017a-easybuild-devel")
== 2017-10-06 15:43:37,620 modules.py:542 DEBUG Found cached result for 'module show intel/2017a' with key '('MODULEPATH=/home/eb/modules/all', 'lmod', 'intel/2017a')': os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/eb/modules/all";
os.environ["MODULEPATH"] = "/home/eb/modules/all";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "Yi9tb2R1bGVmaWxlcyIsWyJ2ZXJzaW9uIl09Mix9";
os.environ["_ModuleTable_Sz_"] = "2";
----------------------------------------------------------------------------
/home/eb/modules/all/intel/2017a.lua:
----------------------------------------------------------------------------
help([[Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL. - Homepage: http://software.intel.com/en-us/intel-cluster-toolkit-compiler/]])
whatis("Description: Intel Cluster Toolkit Compiler Edition provides Intel C/C++ and Fortran compilers, Intel MPI & Intel MKL. - Homepage: http://software.intel.com/en-us/intel-cluster-toolkit-compiler/")
conflict("intel")
load("GCCcore/6.3.0")
load("binutils/2.27-GCCcore-6.3.0")
load("icc/2017.1.132-GCC-6.3.0-2.27")
load("ifort/2017.1.132-GCC-6.3.0-2.27")
load("impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27")
load("imkl/2017.1.132-iimpi-2017a")
setenv("EBROOTINTEL","/home/eb/software/intel/2017a")
setenv("EBVERSIONINTEL","2017a")
setenv("EBDEVELINTEL","/home/eb/software/intel/2017a/easybuild/intel-2017a-easybuild-devel")
== 2017-10-06 15:43:37,620 toolchain.py:600 DEBUG List of toolchain dependencies from toolchain module: ['GCCcore/6.3.0', 'binutils/2.27-GCCcore-6.3.0', 'icc/2017.1.132-GCC-6.3.0-2.27', 'ifort/2017.1.132-GCC-6.3.0-2.27', 'impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27', 'imkl/2017.1.132-iimpi-2017a']
== 2017-10-06 15:43:37,621 toolchain.py:418 DEBUG Toolchain definition for {'dummy': True, 'versionsuffix': '', 'version': '2017a', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'intel', 'full_mod_name': 'intel/2017a', 'hidden': False, 'parsed': True, 'short_mod_name': 'intel/2017a'}: {'LAPACK': ['imkl'], 'SCALAPACK': ['imkl'], 'BLAS': ['imkl'], 'FFT': ['imkl'], 'BLACS': ['imkl'], 'MPI': ['impi'], 'COMPILER': ['icc', 'ifort']}
== 2017-10-06 15:43:37,621 toolchain.py:613 DEBUG List of toolchain elements from toolchain definition: set(['icc', 'imkl', 'impi', 'ifort'])
== 2017-10-06 15:43:37,621 mns.py:164 DEBUG Checking whether 'GCCcore/6.3.0' is a module name for software with name 'icc' via regex ^icc(/\S+)?$: False
== 2017-10-06 15:43:37,621 mns.py:164 DEBUG Checking whether 'binutils/2.27-GCCcore-6.3.0' is a module name for software with name 'icc' via regex ^icc(/\S+)?$: False
== 2017-10-06 15:43:37,621 mns.py:164 DEBUG Checking whether 'icc/2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'icc' via regex ^icc(/\S+)?$: True
== 2017-10-06 15:43:37,622 mns.py:164 DEBUG Checking whether 'ifort/2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'icc' via regex ^icc(/\S+)?$: False
== 2017-10-06 15:43:37,622 mns.py:164 DEBUG Checking whether 'impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'icc' via regex ^icc(/\S+)?$: False
== 2017-10-06 15:43:37,622 mns.py:164 DEBUG Checking whether 'imkl/2017.1.132-iimpi-2017a' is a module name for software with name 'icc' via regex ^icc(/\S+)?$: False
== 2017-10-06 15:43:37,622 mns.py:164 DEBUG Checking whether 'GCCcore/6.3.0' is a module name for software with name 'imkl' via regex ^imkl(/\S+)?$: False
== 2017-10-06 15:43:37,622 mns.py:164 DEBUG Checking whether 'binutils/2.27-GCCcore-6.3.0' is a module name for software with name 'imkl' via regex ^imkl(/\S+)?$: False
== 2017-10-06 15:43:37,622 mns.py:164 DEBUG Checking whether 'icc/2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'imkl' via regex ^imkl(/\S+)?$: False
== 2017-10-06 15:43:37,622 mns.py:164 DEBUG Checking whether 'ifort/2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'imkl' via regex ^imkl(/\S+)?$: False
== 2017-10-06 15:43:37,622 mns.py:164 DEBUG Checking whether 'impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'imkl' via regex ^imkl(/\S+)?$: False
== 2017-10-06 15:43:37,622 mns.py:164 DEBUG Checking whether 'imkl/2017.1.132-iimpi-2017a' is a module name for software with name 'imkl' via regex ^imkl(/\S+)?$: True
== 2017-10-06 15:43:37,623 mns.py:164 DEBUG Checking whether 'GCCcore/6.3.0' is a module name for software with name 'impi' via regex ^impi(/\S+)?$: False
== 2017-10-06 15:43:37,623 mns.py:164 DEBUG Checking whether 'binutils/2.27-GCCcore-6.3.0' is a module name for software with name 'impi' via regex ^impi(/\S+)?$: False
== 2017-10-06 15:43:37,623 mns.py:164 DEBUG Checking whether 'icc/2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'impi' via regex ^impi(/\S+)?$: False
== 2017-10-06 15:43:37,623 mns.py:164 DEBUG Checking whether 'ifort/2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'impi' via regex ^impi(/\S+)?$: False
== 2017-10-06 15:43:37,623 mns.py:164 DEBUG Checking whether 'impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'impi' via regex ^impi(/\S+)?$: True
== 2017-10-06 15:43:37,623 mns.py:164 DEBUG Checking whether 'imkl/2017.1.132-iimpi-2017a' is a module name for software with name 'impi' via regex ^impi(/\S+)?$: False
== 2017-10-06 15:43:37,623 mns.py:164 DEBUG Checking whether 'GCCcore/6.3.0' is a module name for software with name 'ifort' via regex ^ifort(/\S+)?$: False
== 2017-10-06 15:43:37,623 mns.py:164 DEBUG Checking whether 'binutils/2.27-GCCcore-6.3.0' is a module name for software with name 'ifort' via regex ^ifort(/\S+)?$: False
== 2017-10-06 15:43:37,623 mns.py:164 DEBUG Checking whether 'icc/2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'ifort' via regex ^ifort(/\S+)?$: False
== 2017-10-06 15:43:37,624 mns.py:164 DEBUG Checking whether 'ifort/2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'ifort' via regex ^ifort(/\S+)?$: True
== 2017-10-06 15:43:37,624 mns.py:164 DEBUG Checking whether 'impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27' is a module name for software with name 'ifort' via regex ^ifort(/\S+)?$: False
== 2017-10-06 15:43:37,624 mns.py:164 DEBUG Checking whether 'imkl/2017.1.132-iimpi-2017a' is a module name for software with name 'ifort' via regex ^ifort(/\S+)?$: False
== 2017-10-06 15:43:37,624 toolchain.py:616 INFO List of toolchain dependency modules and toolchain definition match!
== 2017-10-06 15:43:37,624 toolchain.py:289 DEBUG get_software_version software version 2017.1.132 for icc was found in environment
== 2017-10-06 15:43:37,624 toolchain.py:289 DEBUG get_software_version software version 2017.1.132 for ifort was found in environment
== 2017-10-06 15:43:37,625 options.py:90 WARNING option: option with name _opt_CC returns None
== 2017-10-06 15:43:37,625 options.py:90 WARNING option: option with name _opt_CXX returns None
== 2017-10-06 15:43:37,625 options.py:90 WARNING option: option with name _opt_F77 returns None
== 2017-10-06 15:43:37,625 options.py:90 WARNING option: option with name _opt_F90 returns None
== 2017-10-06 15:43:37,626 options.py:90 WARNING option: option with name _opt_FC returns None
== 2017-10-06 15:43:37,626 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27 for icc was found in environment
== 2017-10-06 15:43:37,626 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/ifort/2017.1.132-GCC-6.3.0-2.27 for ifort was found in environment
== 2017-10-06 15:43:37,626 toolchain.py:289 DEBUG get_software_version software version 2017.1.132 for icc was found in environment
== 2017-10-06 15:43:37,626 toolchain.py:289 DEBUG get_software_version software version 2017.1.132 for ifort was found in environment
== 2017-10-06 15:43:37,627 compiler.py:321 INFO _set_optimal_architecture: using xHost as optarch for x86_64.
== 2017-10-06 15:43:37,630 mpi.py:130 DEBUG usempi set: defining CC_SEQ as icc
== 2017-10-06 15:43:37,630 mpi.py:133 DEBUG usempi set: switching CC value icc for MPICC value mpiicc
== 2017-10-06 15:43:37,631 mpi.py:130 DEBUG usempi set: defining CXX_SEQ as icpc
== 2017-10-06 15:43:37,631 mpi.py:133 DEBUG usempi set: switching CXX value icpc for MPICXX value mpiicpc
== 2017-10-06 15:43:37,632 mpi.py:130 DEBUG usempi set: defining F77_SEQ as ifort
== 2017-10-06 15:43:37,632 mpi.py:133 DEBUG usempi set: switching F77 value ifort for MPIF77 value mpiifort
== 2017-10-06 15:43:37,633 mpi.py:130 DEBUG usempi set: defining F90_SEQ as ifort
== 2017-10-06 15:43:37,633 mpi.py:133 DEBUG usempi set: switching F90 value ifort for MPIF90 value mpiifort
== 2017-10-06 15:43:37,634 mpi.py:130 DEBUG usempi set: defining FC_SEQ as ifort
== 2017-10-06 15:43:37,634 mpi.py:133 DEBUG usempi set: switching FC value ifort for MPIFC value mpiifort
== 2017-10-06 15:43:37,635 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27 for impi was found in environment
== 2017-10-06 15:43:37,636 toolchain.py:289 DEBUG get_software_version software version 2017.1.132 for imkl was found in environment
== 2017-10-06 15:43:37,636 toolchain.py:289 DEBUG get_software_version software version 2017.1.132 for imkl was found in environment
== 2017-10-06 15:43:37,637 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/imkl/2017.1.132-iimpi-2017a for imkl was found in environment
== 2017-10-06 15:43:37,638 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/imkl/2017.1.132-iimpi-2017a for imkl was found in environment
== 2017-10-06 15:43:37,638 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/include was not found
== 2017-10-06 15:43:37,638 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/lib64 was not found
== 2017-10-06 15:43:37,638 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/compiler/lib/intel64 was not found
== 2017-10-06 15:43:37,641 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/imkl/2017.1.132-iimpi-2017a for imkl was found in environment
== 2017-10-06 15:43:37,641 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/include was not found
== 2017-10-06 15:43:37,642 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/lib64 was not found
== 2017-10-06 15:43:37,642 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/imkl/2017.1.132-iimpi-2017a for imkl was found in environment
== 2017-10-06 15:43:37,643 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/imkl/2017.1.132-iimpi-2017a for imkl was found in environment
== 2017-10-06 15:43:37,643 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/include was not found
== 2017-10-06 15:43:37,643 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/lib64 was not found
== 2017-10-06 15:43:37,643 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/compiler/lib/intel64 was not found
== 2017-10-06 15:43:37,643 toolchain.py:289 DEBUG get_software_version software version 2017.1.132 for imkl was found in environment
== 2017-10-06 15:43:37,645 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/imkl/2017.1.132-iimpi-2017a for imkl was found in environment
== 2017-10-06 15:43:37,646 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/imkl/2017.1.132-iimpi-2017a for imkl was found in environment
== 2017-10-06 15:43:37,646 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/include was not found
== 2017-10-06 15:43:37,646 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/lib64 was not found
== 2017-10-06 15:43:37,646 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/compiler/lib/intel64 was not found
== 2017-10-06 15:43:37,647 intelfftw.py:83 DEBUG fftw_libs ['fftw3xc_intel', 'fftw3x_cdft_lp64', 'mkl_cdft_core', 'mkl_blacs_intelmpi_lp64']
== 2017-10-06 15:43:37,647 intelfftw.py:85 DEBUG fftw_libs ['fftw3xc_intel', 'fftw3x_cdft_lp64', 'mkl_cdft_core', 'mkl_blacs_intelmpi_lp64', 'mkl_intel_lp64', 'mkl_sequential', 'mkl_core']
== 2017-10-06 15:43:37,648 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/imkl/2017.1.132-iimpi-2017a for imkl was found in environment
== 2017-10-06 15:43:37,648 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/imkl/2017.1.132-iimpi-2017a for imkl was found in environment
== 2017-10-06 15:43:37,648 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/include was not found
== 2017-10-06 15:43:37,649 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/imkl/2017.1.132-iimpi-2017a/lib64 was not found
== 2017-10-06 15:43:37,649 toolchain.py:691 DEBUG prepare: set additional variables onlymod=False
== 2017-10-06 15:43:37,649 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18 for netCDF was found in environment
== 2017-10-06 15:43:37,650 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18 for netCDF-Fortran was found in environment
== 2017-10-06 15:43:37,650 toolchain.py:280 DEBUG get_software_root software root /home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18 for netCDF-C++4 was found in environment
== 2017-10-06 15:43:37,650 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib was not found
== 2017-10-06 15:43:37,650 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib64 was not found
== 2017-10-06 15:43:37,651 variables.py:201 WARNING flags_for_subdirs: directory /home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib64 was not found
== 2017-10-06 15:43:37,655 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLACS_INC_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include
== 2017-10-06 15:43:37,655 environment.py:97 INFO Environment variable BLACS_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,656 environment.py:97 INFO Environment variable EBVARBLACS_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,656 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLACS_LIB_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64
== 2017-10-06 15:43:37,656 environment.py:97 INFO Environment variable BLACS_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,656 environment.py:97 INFO Environment variable EBVARBLACS_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,656 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLACS_MT_STATIC_LIBS to libmkl_blacs_intelmpi_lp64.a
== 2017-10-06 15:43:37,656 environment.py:97 INFO Environment variable BLACS_MT_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined)
== 2017-10-06 15:43:37,656 environment.py:97 INFO Environment variable EBVARBLACS_MT_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined)
== 2017-10-06 15:43:37,656 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLACS_STATIC_LIBS to libmkl_blacs_intelmpi_lp64.a
== 2017-10-06 15:43:37,656 environment.py:97 INFO Environment variable BLACS_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined)
== 2017-10-06 15:43:37,656 environment.py:97 INFO Environment variable EBVARBLACS_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined)
== 2017-10-06 15:43:37,657 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLAS_INC_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include
== 2017-10-06 15:43:37,657 environment.py:97 INFO Environment variable BLAS_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,657 environment.py:97 INFO Environment variable EBVARBLAS_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,657 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_INC_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include
== 2017-10-06 15:43:37,657 environment.py:97 INFO Environment variable BLAS_LAPACK_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,657 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,657 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_LIB_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64
== 2017-10-06 15:43:37,657 environment.py:97 INFO Environment variable BLAS_LAPACK_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,657 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,657 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_MT_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a
== 2017-10-06 15:43:37,658 environment.py:97 INFO Environment variable BLAS_LAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
== 2017-10-06 15:43:37,658 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
== 2017-10-06 15:43:37,658 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a
== 2017-10-06 15:43:37,658 environment.py:97 INFO Environment variable BLAS_LAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,658 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,658 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLAS_LIB_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64
== 2017-10-06 15:43:37,658 environment.py:97 INFO Environment variable BLAS_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,658 environment.py:97 INFO Environment variable EBVARBLAS_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,658 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLAS_MT_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a
== 2017-10-06 15:43:37,658 environment.py:97 INFO Environment variable BLAS_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
== 2017-10-06 15:43:37,659 environment.py:97 INFO Environment variable EBVARBLAS_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
== 2017-10-06 15:43:37,659 toolchain.py:892 DEBUG _setenv_variables: setting environment variable BLAS_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a
== 2017-10-06 15:43:37,659 environment.py:97 INFO Environment variable BLAS_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,659 environment.py:97 INFO Environment variable EBVARBLAS_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,659 toolchain.py:892 DEBUG _setenv_variables: setting environment variable CC to mpiicc
== 2017-10-06 15:43:37,659 environment.py:97 INFO Environment variable CC set to mpiicc (previously undefined)
== 2017-10-06 15:43:37,659 environment.py:97 INFO Environment variable EBVARCC set to mpiicc (previously undefined)
== 2017-10-06 15:43:37,659 toolchain.py:892 DEBUG _setenv_variables: setting environment variable CC_SEQ to icc
== 2017-10-06 15:43:37,659 environment.py:97 INFO Environment variable CC_SEQ set to icc (previously undefined)
== 2017-10-06 15:43:37,660 environment.py:97 INFO Environment variable EBVARCC_SEQ set to icc (previously undefined)
== 2017-10-06 15:43:37,660 toolchain.py:892 DEBUG _setenv_variables: setting environment variable CFLAGS to -O2 -xHost -ftz -fp-speculation=safe -fp-model source
== 2017-10-06 15:43:37,660 environment.py:97 INFO Environment variable CFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,660 environment.py:97 INFO Environment variable EBVARCFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,660 toolchain.py:892 DEBUG _setenv_variables: setting environment variable CPPFLAGS to -I/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include -I/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/include -I/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/include -I/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/include
== 2017-10-06 15:43:37,660 environment.py:97 INFO Environment variable CPPFLAGS set to -I/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include -I/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/include -I/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/include -I/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/include (previously undefined)
== 2017-10-06 15:43:37,660 environment.py:97 INFO Environment variable EBVARCPPFLAGS set to -I/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include -I/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/include -I/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/include -I/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/include (previously undefined)
== 2017-10-06 15:43:37,660 toolchain.py:892 DEBUG _setenv_variables: setting environment variable CXX to mpiicpc
== 2017-10-06 15:43:37,661 environment.py:97 INFO Environment variable CXX set to mpiicpc (previously undefined)
== 2017-10-06 15:43:37,661 environment.py:97 INFO Environment variable EBVARCXX set to mpiicpc (previously undefined)
== 2017-10-06 15:43:37,661 toolchain.py:892 DEBUG _setenv_variables: setting environment variable CXXFLAGS to -O2 -xHost -ftz -fp-speculation=safe -fp-model source
== 2017-10-06 15:43:37,661 environment.py:97 INFO Environment variable CXXFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,661 environment.py:97 INFO Environment variable EBVARCXXFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,661 toolchain.py:892 DEBUG _setenv_variables: setting environment variable CXX_SEQ to icpc
== 2017-10-06 15:43:37,661 environment.py:97 INFO Environment variable CXX_SEQ set to icpc (previously undefined)
== 2017-10-06 15:43:37,661 environment.py:97 INFO Environment variable EBVARCXX_SEQ set to icpc (previously undefined)
== 2017-10-06 15:43:37,662 toolchain.py:892 DEBUG _setenv_variables: setting environment variable F77 to mpiifort
== 2017-10-06 15:43:37,662 environment.py:97 INFO Environment variable F77 set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,662 environment.py:97 INFO Environment variable EBVARF77 set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,662 toolchain.py:892 DEBUG _setenv_variables: setting environment variable F77_SEQ to ifort
== 2017-10-06 15:43:37,662 environment.py:97 INFO Environment variable F77_SEQ set to ifort (previously undefined)
== 2017-10-06 15:43:37,662 environment.py:97 INFO Environment variable EBVARF77_SEQ set to ifort (previously undefined)
== 2017-10-06 15:43:37,662 toolchain.py:892 DEBUG _setenv_variables: setting environment variable F90 to mpiifort
== 2017-10-06 15:43:37,662 environment.py:97 INFO Environment variable F90 set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,662 environment.py:97 INFO Environment variable EBVARF90 set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,662 toolchain.py:892 DEBUG _setenv_variables: setting environment variable F90FLAGS to -O2 -xHost -ftz -fp-speculation=safe -fp-model source
== 2017-10-06 15:43:37,663 environment.py:97 INFO Environment variable F90FLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,663 environment.py:97 INFO Environment variable EBVARF90FLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,663 toolchain.py:892 DEBUG _setenv_variables: setting environment variable F90_SEQ to ifort
== 2017-10-06 15:43:37,663 environment.py:97 INFO Environment variable F90_SEQ set to ifort (previously undefined)
== 2017-10-06 15:43:37,663 environment.py:97 INFO Environment variable EBVARF90_SEQ set to ifort (previously undefined)
== 2017-10-06 15:43:37,663 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FC to mpiifort
== 2017-10-06 15:43:37,663 environment.py:97 INFO Environment variable FC set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,663 environment.py:97 INFO Environment variable EBVARFC set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,663 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FCFLAGS to -O2 -xHost -ftz -fp-speculation=safe -fp-model source
== 2017-10-06 15:43:37,663 environment.py:97 INFO Environment variable FCFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,664 environment.py:97 INFO Environment variable EBVARFCFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,664 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FC_SEQ to ifort
== 2017-10-06 15:43:37,664 environment.py:97 INFO Environment variable FC_SEQ set to ifort (previously undefined)
== 2017-10-06 15:43:37,664 environment.py:97 INFO Environment variable EBVARFC_SEQ set to ifort (previously undefined)
== 2017-10-06 15:43:37,664 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FFLAGS to -O2 -xHost -ftz -fp-speculation=safe -fp-model source
== 2017-10-06 15:43:37,664 environment.py:97 INFO Environment variable FFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,664 environment.py:97 INFO Environment variable EBVARFFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,664 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FFTW_INC_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include
== 2017-10-06 15:43:37,664 environment.py:97 INFO Environment variable FFTW_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,665 environment.py:97 INFO Environment variable EBVARFFTW_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,665 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FFTW_LIB_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64
== 2017-10-06 15:43:37,665 environment.py:97 INFO Environment variable FFTW_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,665 environment.py:97 INFO Environment variable EBVARFFTW_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,665 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FFTW_STATIC_LIBS to libfftw3xc_intel.a,libfftw3x_cdft_lp64.a,libmkl_cdft_core.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a
== 2017-10-06 15:43:37,665 environment.py:97 INFO Environment variable FFTW_STATIC_LIBS set to libfftw3xc_intel.a,libfftw3x_cdft_lp64.a,libmkl_cdft_core.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,665 environment.py:97 INFO Environment variable EBVARFFTW_STATIC_LIBS set to libfftw3xc_intel.a,libfftw3x_cdft_lp64.a,libmkl_cdft_core.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,665 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FFTW_STATIC_LIBS_MT to -fftw3xc_intel -fftw3x_cdft_lp64 -mkl_cdft_core -mkl_blacs_intelmpi_lp64 -mkl_intel_lp64 -mkl_sequential -mkl_core
== 2017-10-06 15:43:37,665 environment.py:97 INFO Environment variable FFTW_STATIC_LIBS_MT set to -fftw3xc_intel -fftw3x_cdft_lp64 -mkl_cdft_core -mkl_blacs_intelmpi_lp64 -mkl_intel_lp64 -mkl_sequential -mkl_core (previously undefined)
== 2017-10-06 15:43:37,665 environment.py:97 INFO Environment variable EBVARFFTW_STATIC_LIBS_MT set to -fftw3xc_intel -fftw3x_cdft_lp64 -mkl_cdft_core -mkl_blacs_intelmpi_lp64 -mkl_intel_lp64 -mkl_sequential -mkl_core (previously undefined)
== 2017-10-06 15:43:37,666 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FFT_INC_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include
== 2017-10-06 15:43:37,666 environment.py:97 INFO Environment variable FFT_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,666 environment.py:97 INFO Environment variable EBVARFFT_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,666 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FFT_LIB_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64
== 2017-10-06 15:43:37,666 environment.py:97 INFO Environment variable FFT_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,666 environment.py:97 INFO Environment variable EBVARFFT_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,666 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FFT_STATIC_LIBS to libfftw3xc_intel.a,libfftw3x_cdft_lp64.a,libmkl_cdft_core.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a
== 2017-10-06 15:43:37,666 environment.py:97 INFO Environment variable FFT_STATIC_LIBS set to libfftw3xc_intel.a,libfftw3x_cdft_lp64.a,libmkl_cdft_core.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,666 environment.py:97 INFO Environment variable EBVARFFT_STATIC_LIBS set to libfftw3xc_intel.a,libfftw3x_cdft_lp64.a,libmkl_cdft_core.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,667 toolchain.py:892 DEBUG _setenv_variables: setting environment variable FFT_STATIC_LIBS_MT to libfftw3xc_intel.a,libfftw3x_cdft_lp64.a,libmkl_cdft_core.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a
== 2017-10-06 15:43:37,667 environment.py:97 INFO Environment variable FFT_STATIC_LIBS_MT set to libfftw3xc_intel.a,libfftw3x_cdft_lp64.a,libmkl_cdft_core.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,667 environment.py:97 INFO Environment variable EBVARFFT_STATIC_LIBS_MT set to libfftw3xc_intel.a,libfftw3x_cdft_lp64.a,libmkl_cdft_core.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,667 toolchain.py:892 DEBUG _setenv_variables: setting environment variable I_MPI_CC to icc
== 2017-10-06 15:43:37,667 environment.py:97 INFO Environment variable I_MPI_CC set to icc (previously undefined)
== 2017-10-06 15:43:37,667 environment.py:97 INFO Environment variable EBVARI_MPI_CC set to icc (previously undefined)
== 2017-10-06 15:43:37,667 toolchain.py:892 DEBUG _setenv_variables: setting environment variable I_MPI_CXX to icpc
== 2017-10-06 15:43:37,667 environment.py:97 INFO Environment variable I_MPI_CXX set to icpc (previously undefined)
== 2017-10-06 15:43:37,667 environment.py:97 INFO Environment variable EBVARI_MPI_CXX set to icpc (previously undefined)
== 2017-10-06 15:43:37,667 toolchain.py:892 DEBUG _setenv_variables: setting environment variable I_MPI_F77 to ifort
== 2017-10-06 15:43:37,668 environment.py:97 INFO Environment variable I_MPI_F77 set to ifort (previously undefined)
== 2017-10-06 15:43:37,668 environment.py:97 INFO Environment variable EBVARI_MPI_F77 set to ifort (previously undefined)
== 2017-10-06 15:43:37,668 toolchain.py:892 DEBUG _setenv_variables: setting environment variable I_MPI_F90 to ifort
== 2017-10-06 15:43:37,668 environment.py:97 INFO Environment variable I_MPI_F90 set to ifort (previously undefined)
== 2017-10-06 15:43:37,668 environment.py:97 INFO Environment variable EBVARI_MPI_F90 set to ifort (previously undefined)
== 2017-10-06 15:43:37,668 toolchain.py:892 DEBUG _setenv_variables: setting environment variable I_MPI_FC to ifort
== 2017-10-06 15:43:37,668 environment.py:97 INFO Environment variable I_MPI_FC set to ifort (previously undefined)
== 2017-10-06 15:43:37,668 environment.py:97 INFO Environment variable EBVARI_MPI_FC set to ifort (previously undefined)
== 2017-10-06 15:43:37,668 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LAPACK_INC_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include
== 2017-10-06 15:43:37,668 environment.py:97 INFO Environment variable LAPACK_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,669 environment.py:97 INFO Environment variable EBVARLAPACK_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,669 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LAPACK_LIB_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64
== 2017-10-06 15:43:37,669 environment.py:97 INFO Environment variable LAPACK_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,669 environment.py:97 INFO Environment variable EBVARLAPACK_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,669 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LAPACK_MT_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a
== 2017-10-06 15:43:37,669 environment.py:97 INFO Environment variable LAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
== 2017-10-06 15:43:37,669 environment.py:97 INFO Environment variable EBVARLAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
== 2017-10-06 15:43:37,669 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LAPACK_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a
== 2017-10-06 15:43:37,669 environment.py:97 INFO Environment variable LAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,670 environment.py:97 INFO Environment variable EBVARLAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,670 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LDFLAGS to -L/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64 -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib -L/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64 -L/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib -L/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib
== 2017-10-06 15:43:37,670 environment.py:97 INFO Environment variable LDFLAGS set to -L/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64 -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib -L/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64 -L/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib -L/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib (previously undefined)
== 2017-10-06 15:43:37,670 environment.py:97 INFO Environment variable EBVARLDFLAGS set to -L/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64 -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib -L/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64 -L/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib -L/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib (previously undefined)
== 2017-10-06 15:43:37,670 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBBLACS to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic
== 2017-10-06 15:43:37,670 environment.py:97 INFO Environment variable LIBBLACS set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,670 environment.py:97 INFO Environment variable EBVARLIBBLACS set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,670 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBBLACS_MT to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic
== 2017-10-06 15:43:37,670 environment.py:97 INFO Environment variable LIBBLACS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,671 environment.py:97 INFO Environment variable EBVARLIBBLACS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,671 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBBLAS to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic
== 2017-10-06 15:43:37,671 environment.py:97 INFO Environment variable LIBBLAS set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,671 environment.py:97 INFO Environment variable EBVARLIBBLAS set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,671 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBBLAS_MT to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread
== 2017-10-06 15:43:37,671 environment.py:97 INFO Environment variable LIBBLAS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,671 environment.py:97 INFO Environment variable EBVARLIBBLAS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,671 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBFFT to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lfftw3x_cdft_lp64 -lmkl_cdft_core -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic
== 2017-10-06 15:43:37,671 environment.py:97 INFO Environment variable LIBFFT set to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lfftw3x_cdft_lp64 -lmkl_cdft_core -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,671 environment.py:97 INFO Environment variable EBVARLIBFFT set to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lfftw3x_cdft_lp64 -lmkl_cdft_core -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,672 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBFFT_MT to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lfftw3x_cdft_lp64 -lmkl_cdft_core -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic
== 2017-10-06 15:43:37,672 environment.py:97 INFO Environment variable LIBFFT_MT set to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lfftw3x_cdft_lp64 -lmkl_cdft_core -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,672 environment.py:97 INFO Environment variable EBVARLIBFFT_MT set to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lfftw3x_cdft_lp64 -lmkl_cdft_core -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,672 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBLAPACK to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic
== 2017-10-06 15:43:37,672 environment.py:97 INFO Environment variable LIBLAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,672 environment.py:97 INFO Environment variable EBVARLIBLAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,672 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBLAPACK_MT to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread
== 2017-10-06 15:43:37,672 environment.py:97 INFO Environment variable LIBLAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,672 environment.py:97 INFO Environment variable EBVARLIBLAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,673 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBLAPACK_MT_ONLY to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread
== 2017-10-06 15:43:37,673 environment.py:97 INFO Environment variable LIBLAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,673 environment.py:97 INFO Environment variable EBVARLIBLAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,673 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBLAPACK_ONLY to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic
== 2017-10-06 15:43:37,673 environment.py:97 INFO Environment variable LIBLAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,673 environment.py:97 INFO Environment variable EBVARLIBLAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,673 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBS to -liomp5 -lpthread
== 2017-10-06 15:43:37,673 environment.py:97 INFO Environment variable LIBS set to -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,673 environment.py:97 INFO Environment variable EBVARLIBS set to -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,674 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic
== 2017-10-06 15:43:37,674 environment.py:97 INFO Environment variable LIBSCALAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,674 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,674 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_MT to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread
== 2017-10-06 15:43:37,674 environment.py:97 INFO Environment variable LIBSCALAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,674 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,674 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_MT_ONLY to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread
== 2017-10-06 15:43:37,674 environment.py:97 INFO Environment variable LIBSCALAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,674 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,674 toolchain.py:892 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_ONLY to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic
== 2017-10-06 15:43:37,675 environment.py:97 INFO Environment variable LIBSCALAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,675 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
== 2017-10-06 15:43:37,675 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPICC to mpiicc
== 2017-10-06 15:43:37,675 environment.py:97 INFO Environment variable MPICC set to mpiicc (previously undefined)
== 2017-10-06 15:43:37,675 environment.py:97 INFO Environment variable EBVARMPICC set to mpiicc (previously undefined)
== 2017-10-06 15:43:37,675 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPICH_CC to icc
== 2017-10-06 15:43:37,675 environment.py:97 INFO Environment variable MPICH_CC set to icc (previously undefined)
== 2017-10-06 15:43:37,675 environment.py:97 INFO Environment variable EBVARMPICH_CC set to icc (previously undefined)
== 2017-10-06 15:43:37,675 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPICH_CXX to icpc
== 2017-10-06 15:43:37,676 environment.py:97 INFO Environment variable MPICH_CXX set to icpc (previously undefined)
== 2017-10-06 15:43:37,676 environment.py:97 INFO Environment variable EBVARMPICH_CXX set to icpc (previously undefined)
== 2017-10-06 15:43:37,676 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPICH_F77 to ifort
== 2017-10-06 15:43:37,676 environment.py:97 INFO Environment variable MPICH_F77 set to ifort (previously undefined)
== 2017-10-06 15:43:37,676 environment.py:97 INFO Environment variable EBVARMPICH_F77 set to ifort (previously undefined)
== 2017-10-06 15:43:37,676 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPICH_F90 to ifort
== 2017-10-06 15:43:37,676 environment.py:97 INFO Environment variable MPICH_F90 set to ifort (previously undefined)
== 2017-10-06 15:43:37,676 environment.py:97 INFO Environment variable EBVARMPICH_F90 set to ifort (previously undefined)
== 2017-10-06 15:43:37,676 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPICH_FC to ifort
== 2017-10-06 15:43:37,677 environment.py:97 INFO Environment variable MPICH_FC set to ifort (previously undefined)
== 2017-10-06 15:43:37,677 environment.py:97 INFO Environment variable EBVARMPICH_FC set to ifort (previously undefined)
== 2017-10-06 15:43:37,677 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPICXX to mpiicpc
== 2017-10-06 15:43:37,677 environment.py:97 INFO Environment variable MPICXX set to mpiicpc (previously undefined)
== 2017-10-06 15:43:37,677 environment.py:97 INFO Environment variable EBVARMPICXX set to mpiicpc (previously undefined)
== 2017-10-06 15:43:37,677 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPIF77 to mpiifort
== 2017-10-06 15:43:37,677 environment.py:97 INFO Environment variable MPIF77 set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,677 environment.py:97 INFO Environment variable EBVARMPIF77 set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,677 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPIF90 to mpiifort
== 2017-10-06 15:43:37,677 environment.py:97 INFO Environment variable MPIF90 set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,678 environment.py:97 INFO Environment variable EBVARMPIF90 set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,678 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPIFC to mpiifort
== 2017-10-06 15:43:37,678 environment.py:97 INFO Environment variable MPIFC set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,678 environment.py:97 INFO Environment variable EBVARMPIFC set to mpiifort (previously undefined)
== 2017-10-06 15:43:37,678 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPI_INC_DIR to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/include64
== 2017-10-06 15:43:37,678 environment.py:97 INFO Environment variable MPI_INC_DIR set to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/include64 (previously undefined)
== 2017-10-06 15:43:37,678 environment.py:97 INFO Environment variable EBVARMPI_INC_DIR set to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/include64 (previously undefined)
== 2017-10-06 15:43:37,678 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPI_LIB_DIR to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64
== 2017-10-06 15:43:37,678 environment.py:97 INFO Environment variable MPI_LIB_DIR set to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64 (previously undefined)
== 2017-10-06 15:43:37,679 environment.py:97 INFO Environment variable EBVARMPI_LIB_DIR set to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64 (previously undefined)
== 2017-10-06 15:43:37,679 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPI_LIB_SHARED to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.so
== 2017-10-06 15:43:37,679 environment.py:97 INFO Environment variable MPI_LIB_SHARED set to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.so (previously undefined)
== 2017-10-06 15:43:37,679 environment.py:97 INFO Environment variable EBVARMPI_LIB_SHARED set to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.so (previously undefined)
== 2017-10-06 15:43:37,679 toolchain.py:892 DEBUG _setenv_variables: setting environment variable MPI_LIB_STATIC to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.a
== 2017-10-06 15:43:37,679 environment.py:97 INFO Environment variable MPI_LIB_STATIC set to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.a (previously undefined)
== 2017-10-06 15:43:37,679 environment.py:97 INFO Environment variable EBVARMPI_LIB_STATIC set to /home/eb/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.a (previously undefined)
== 2017-10-06 15:43:37,679 toolchain.py:892 DEBUG _setenv_variables: setting environment variable OPTFLAGS to -O2 -xHost
== 2017-10-06 15:43:37,679 environment.py:97 INFO Environment variable OPTFLAGS set to -O2 -xHost (previously undefined)
== 2017-10-06 15:43:37,679 environment.py:97 INFO Environment variable EBVAROPTFLAGS set to -O2 -xHost (previously undefined)
== 2017-10-06 15:43:37,680 toolchain.py:892 DEBUG _setenv_variables: setting environment variable PRECFLAGS to -ftz -fp-speculation=safe -fp-model source
== 2017-10-06 15:43:37,680 environment.py:97 INFO Environment variable PRECFLAGS set to -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,680 environment.py:97 INFO Environment variable EBVARPRECFLAGS set to -ftz -fp-speculation=safe -fp-model source (previously undefined)
== 2017-10-06 15:43:37,680 toolchain.py:892 DEBUG _setenv_variables: setting environment variable SCALAPACK_INC_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include
== 2017-10-06 15:43:37,680 environment.py:97 INFO Environment variable SCALAPACK_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,680 environment.py:97 INFO Environment variable EBVARSCALAPACK_INC_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined)
== 2017-10-06 15:43:37,680 toolchain.py:892 DEBUG _setenv_variables: setting environment variable SCALAPACK_LIB_DIR to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64
== 2017-10-06 15:43:37,680 environment.py:97 INFO Environment variable SCALAPACK_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,680 environment.py:97 INFO Environment variable EBVARSCALAPACK_LIB_DIR set to /home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined)
== 2017-10-06 15:43:37,681 toolchain.py:892 DEBUG _setenv_variables: setting environment variable SCALAPACK_MT_STATIC_LIBS to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a
== 2017-10-06 15:43:37,681 environment.py:97 INFO Environment variable SCALAPACK_MT_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
== 2017-10-06 15:43:37,681 environment.py:97 INFO Environment variable EBVARSCALAPACK_MT_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
== 2017-10-06 15:43:37,681 toolchain.py:892 DEBUG _setenv_variables: setting environment variable SCALAPACK_STATIC_LIBS to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a
== 2017-10-06 15:43:37,681 environment.py:97 INFO Environment variable SCALAPACK_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,681 environment.py:97 INFO Environment variable EBVARSCALAPACK_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
== 2017-10-06 15:43:37,681 easyblock.py:1414 INFO Using /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf/ as start dir
== 2017-10-06 15:43:37,681 easyblock.py:1417 DEBUG Changed to real build directory /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf/ (start_dir)
== 2017-10-06 15:43:37,681 easyblock.py:2408 DEBUG Not skipping configure step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False
== 2017-10-06 15:43:37,682 build_log.py:232 INFO configuring...
== 2017-10-06 15:43:37,682 easyblock.py:2416 INFO Starting configure step
== 2017-10-06 15:43:37,682 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:37,682 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:37,682 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:37,682 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:37,682 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:37,682 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:37,682 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:37,683 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x12ad6d0>
== 2017-10-06 15:43:37,683 templates.py:175 DEBUG version found in easyconfig is 6.3.0rp1
== 2017-10-06 15:43:37,683 templates.py:219 DEBUG name: github_account, config: None
== 2017-10-06 15:43:37,683 templates.py:219 DEBUG name: name, config: ESMF
== 2017-10-06 15:43:37,683 templates.py:219 DEBUG name: version, config: 6.3.0rp1
== 2017-10-06 15:43:37,683 templates.py:219 DEBUG name: versionsuffix, config: -HDF5-1.8.18
== 2017-10-06 15:43:37,683 templates.py:219 DEBUG name: versionprefix, config:
== 2017-10-06 15:43:37,683 easyblock.py:2419 INFO Running method configure_step part of step configure
== 2017-10-06 15:43:37,683 environment.py:97 INFO Environment variable ESMF_DIR set to /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf/ (previously undefined)
== 2017-10-06 15:43:37,684 environment.py:97 INFO Environment variable ESMF_INSTALL_PREFIX set to /home/eb/software/ESMF/6.3.0rp1-intel-2017a-HDF5-1.8.18 (previously undefined)
== 2017-10-06 15:43:37,684 environment.py:97 INFO Environment variable ESMF_INSTALL_BINDIR set to bin (previously undefined)
== 2017-10-06 15:43:37,684 environment.py:97 INFO Environment variable ESMF_INSTALL_LIBDIR set to lib (previously undefined)
== 2017-10-06 15:43:37,684 environment.py:97 INFO Environment variable ESMF_INSTALL_MODDIR set to mod (previously undefined)
== 2017-10-06 15:43:37,684 environment.py:97 INFO Environment variable ESMF_COMPILER set to intel (previously undefined)
== 2017-10-06 15:43:37,684 environment.py:97 INFO Environment variable ESMF_COMM set to intelmpi (previously undefined)
== 2017-10-06 15:43:37,684 environment.py:97 INFO Environment variable ESMF_LAPACK set to user (previously undefined)
== 2017-10-06 15:43:37,684 environment.py:97 INFO Environment variable ESMF_LAPACK_LIBS set to -L/home/eb/software/icc/2017.1.132-GCC-6.3.0-2.27/lib/intel64 -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 -L/home/eb/software/imkl/2017.1.132-iimpi-2017a/lib -L/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib64 -L/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib -L/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
== 2017-10-06 15:43:37,684 environment.py:97 INFO Environment variable ESMF_NETCDF set to user (previously undefined)
== 2017-10-06 15:43:37,685 environment.py:97 INFO Environment variable ESMF_NETCDF_LIBS set to -L/home/eb/software/netCDF-C++4/4.3.0-intel-2017a-HDF5-1.8.18/lib -L/home/eb/software/netCDF-Fortran/4.4.4-intel-2017a-HDF5-1.8.18/lib -L/home/eb/software/netCDF/4.4.1.1-intel-2017a-HDF5-1.8.18/lib -lnetcdf -lnetcdff -lnetcdf_c++4 (previously undefined)
== 2017-10-06 15:43:37,685 run.py:159 DEBUG run_cmd: running cmd make info (in /dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf)
== 2017-10-06 15:43:37,685 run.py:179 INFO running cmd: make info
== 2017-10-06 15:43:37,769 run.py:464 DEBUG cmd "make info" exited with exitcode 2 and output:
/dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf//build_config/Unicos.intel.default/build_rules.mk:39: *** Invalid ESMF_COMM setting: intelmpi. Stop.
== 2017-10-06 15:43:37,791 build_log.py:157 ERROR EasyBuild crashed with an error (at ?:124 in __init__): cmd "make info" exited with exitcode 2 and output:
/dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf//build_config/Unicos.intel.default/build_rules.mk:39: *** Invalid ESMF_COMM setting: intelmpi. Stop.
(at easybuild/tools/run.py:469 in parse_cmd_output)
== 2017-10-06 15:43:37,791 easyblock.py:2650 WARNING build failed (first 300 chars): cmd "make info" exited with exitcode 2 and output:
/dev/shm/eb-build/ESMF/6.3.0rp1/intel-2017a-HDF5-1.8.18/esmf//build_config/Unicos.intel.default/build_rules.mk:39: *** Invalid ESMF_COMM setting: intelmpi. Stop.
== 2017-10-06 15:43:37,791 easyblock.py:287 INFO Closing log for application name ESMF version 6.3.0rp1
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