Andy Bell andybell

## Batch_geotif.sh
#copies all tifs in a folder and saves them as compressed geotifs
mkdir geotifs
for file in *.tif
do
	#gdal_translate
	gdal_translate -of GTiff -co "COMPRESS=LZW" $file geotifs/$file
done


## index.html
<!DOCTYPE html>
<html>

<head>
    <meta http-equiv="Content-Type" content="text/html; charset=utf-8">
    <!--The viewport meta tag is used to improve the presentation and behavior of the samples
      on iOS devices-->
    <meta name="viewport" content="initial-scale=1, maximum-scale=1,user-scalable=no">
    <title>Unique Value Renderer</title>
    <link rel="stylesheet" href="http://js.arcgis.com/3.14/esri/css/esri.css">

## pt_cloud_subset
#!/bin/bash
# uses grep wildcard to get a subset of a XYZ pointcloud
# usage: file_in, file_out, x, y

# echo arguments to the shell
echo $1 $2 $3 $4

in=$1
out=$2
x=$3

## replaceZero.cal
# replace all zeros with <Null>, anything else keep the same
def replaceZero(value):
	if value == 0:
		return None
	else:
		return value
__esri_field_calculator_splitter__
replaceZero( !current_richness_Native_Fish!)

## test.geojson

      
              1 file
            
          
              0 forks
            
          
              0 comments
            
          
              0 stars
            
          
                andybell
                / test.geojson
            
            
              Created
              July 7, 2016 17:08
            
          
        Loading

      Sorry, something went wrong. Reload?
      Sorry, we cannot display this file.
      Sorry, this file is invalid so it cannot be displayed.
      
          Viewer requires iframe.
      
    
## BareET_sept2015.csv

          
            Method
            D1
            D2
            D3
            D4
            D5

            
              CalSIMETAW
              0.4
              0.4
              
              
              0.4

            
              DETAW
              0.4
              0.4
              
              
              2.7

            
              DisALEXI
              2
              1.8
              1.6
              1.7
              1.3

            
              ITRC
              1.3
              1.5
              0.8
              0.9
              0.7

            
              SIMS
              1.3
              1.3
              
              
              1.6

            
              UCD-METRIC
              1.5
              2.4
              1.6
              2.5
              1.8

            
              UCD-PT
              
              
              3.3
              3.3
              4.4

            
              MEASURED
              0.17
              0.35
              0.051
              0.41
              0.39

## keybase.md

      
              1 file
            
          
              0 forks
            
          
              0 comments
            
          
              0 stars
            
          
                andybell
                / keybase.md
            
            
              Created
              April 14, 2017 20:29
            
          
    Keybase proof

I hereby claim:

I am andybell on github.
I am andybell (https://keybase.io/andybell) on keybase.
I have a public key whose fingerprint is 0A0B 34A8 1594 3CE5 B786  0A6F E6E6 9A9E 21F4 FD66

To claim this, I am signing this object:

  
## mtb-example.py
import MarinegeoTemplateBuilder  # load the MarinegeoTemplateBuilder library
from MarinegeoTemplateBuilder.classes import Field, Vocab  # load the objects to contstruct fields + vocab

# python dictionary of the metadata values to prefill

metadataValues = {"TemplateVersion": "v0.0.0",
                  "Title": "This is a demo workbook"}

# list of fields to construct
fields = [

## normalizeField.py
import arcpy
def normalizeField(in_table, in_field, out_field, index_min, index_max):
    """
	Normalizes a field to a new range
	:param in_table: input table
	:param in_field: field with the original values
	:param out_field: output field
	:param index_min: the minimum value for the new range
	:param index_max: the mazimum value for the new range
	:return:

## timeit.py
import time

# timer decorator
# adapted from https://medium.com/pythonhive/python-decorator-to-measure-the-execution-time-of-methods-fa04cb6bb36d
def timeit(method):
	def timed(*args, **kw):
		ts = time.time()
		result = method(*args, **kw)
		te = time.time()
		if 'log_time' in kw:
	#copies all tifs in a folder and saves them as compressed geotifs
	mkdir geotifs
	for file in *.tif
	do
	#gdal_translate
	gdal_translate -of GTiff -co "COMPRESS=LZW" $file geotifs/$file
	done
	<!DOCTYPE html>
	<html>

	<head>
	<meta http-equiv="Content-Type" content="text/html; charset=utf-8">
	<!--The viewport meta tag is used to improve the presentation and behavior of the samples
	on iOS devices-->
	<meta name="viewport" content="initial-scale=1, maximum-scale=1,user-scalable=no">
	<title>Unique Value Renderer</title>
	<link rel="stylesheet" href="http://js.arcgis.com/3.14/esri/css/esri.css">
	#!/bin/bash
	# uses grep wildcard to get a subset of a XYZ pointcloud
	# usage: file_in, file_out, x, y

	# echo arguments to the shell
	echo $1 $2 $3 $4

	in=$1
	out=$2
	x=$3
	# replace all zeros with <Null>, anything else keep the same
	def replaceZero(value):
	if value == 0:
	return None
	else:
	return value
	__esri_field_calculator_splitter__
	replaceZero( !current_richness_Native_Fish!)
Method	D1	D2	D3	D4	D5
CalSIMETAW	0.4	0.4			0.4
DETAW	0.4	0.4			2.7
DisALEXI	2	1.8	1.6	1.7	1.3
ITRC	1.3	1.5	0.8	0.9	0.7
SIMS	1.3	1.3			1.6
UCD-METRIC	1.5	2.4	1.6	2.5	1.8
UCD-PT			3.3	3.3	4.4
MEASURED	0.17	0.35	0.051	0.41	0.39
	import MarinegeoTemplateBuilder # load the MarinegeoTemplateBuilder library
	from MarinegeoTemplateBuilder.classes import Field, Vocab # load the objects to contstruct fields + vocab

	# python dictionary of the metadata values to prefill

	metadataValues = {"TemplateVersion": "v0.0.0",
	"Title": "This is a demo workbook"}

	# list of fields to construct
	fields = [
	import arcpy
	def normalizeField(in_table, in_field, out_field, index_min, index_max):
	"""
	Normalizes a field to a new range
	:param in_table: input table
	:param in_field: field with the original values
	:param out_field: output field
	:param index_min: the minimum value for the new range
	:param index_max: the mazimum value for the new range
	:return:
	import time

	# timer decorator
	# adapted from https://medium.com/pythonhive/python-decorator-to-measure-the-execution-time-of-methods-fa04cb6bb36d
	def timeit(method):
	def timed(args, *kw):
	ts = time.time()
	result = method(args, *kw)
	te = time.time()
	if 'log_time' in kw: