Docker Rstudio

gistfile1.txt

# start container with correct port and bind mount
docker run -d -it -p 8788:8787 -v ~/two_sided_matching_empirical:/home/rstudio/two_sided_matching_empirical rocker/rstudio
# 8788 is the host port, to be access from browser

docker container ps # list containers

# Log into docker terminal as root (to install Miniconda)
docker exec -ti -u root container_name bash
apt update && apt install bzip2 # always update first so that the image has package cache
wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
bash Miniconda3-latest-Linux-x86_64.sh
miniconda3/bin/conda install numpy scipy pandas

sudo adduser rstudio sudo

# Use Rstudio terminal
source .bashrc # otherwise things in there not run automatically