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Configure log with OBJC="gcc -arch x86_64"
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by R configure 3.0.1, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ../R-3.0.1/configure --with-system-zlib --enable-memory-profiling --with-blas=-framework Accelerate --with-lapack --x-includes=/usr/X11/include --x-libraries=/usr/X11/lib OBJC=gcc -arch x86_64 LDFLAGS=-L/opt/local/lib CPPFLAGS=-I/opt/local/include
## --------- ##
## Platform. ##
## --------- ##
hostname = Simons-MacBook-Pro.local
uname -m = x86_64
uname -r = 12.4.0
uname -s = Darwin
uname -v = Darwin Kernel Version 12.4.0: Wed May 1 17:57:12 PDT 2013; root:xnu-2050.24.15~1/RELEASE_X86_64
/usr/bin/uname -p = i386
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 12.4.0: Wed May 1 17:57:12 PDT 2013; root:xnu-2050.24.15~1/RELEASE_X86_64
Kernel configured for up to 4 processors.
2 processors are physically available.
4 processors are logically available.
Processor type: i486 (Intel 80486)
Processors active: 0 1 2 3
Primary memory available: 8.00 gigabytes
Default processor set: 112 tasks, 475 threads, 4 processors
Load average: 1.48, Mach factor: 2.50
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /opt/local/bin
PATH: /opt/local/sbin
PATH: /opt/local/bin
PATH: /opt/local/sbin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:3635: checking build system type
configure:3649: result: x86_64-apple-darwin12.4.0
configure:3669: checking host system type
configure:3682: result: x86_64-apple-darwin12.4.0
configure:4377: checking for pwd
configure:4395: found /bin/pwd
configure:4408: result: /bin/pwd
configure:4416: checking whether builddir is srcdir
configure:4424: result: no
configure:4429: checking for working aclocal
configure:4437: result: missing
configure:4442: checking for working autoconf
configure:4450: result: missing
configure:4455: checking for working automake
configure:4463: result: missing
configure:4468: checking for working autoheader
configure:4476: result: missing
configure:4485: checking for gawk
configure:4515: result: no
configure:4485: checking for mawk
configure:4515: result: no
configure:4485: checking for nawk
configure:4515: result: no
configure:4485: checking for awk
configure:4501: found /usr/bin/awk
configure:4512: result: awk
configure:4523: checking whether ln -s works
configure:4527: result: yes
configure:4538: checking for bison
configure:4554: found /usr/bin/bison
configure:4565: result: bison -y
configure:4581: checking for ar
configure:4597: found /opt/local/bin/ar
configure:4608: result: ar
configure:4636: checking for a BSD-compatible install
configure:4704: result: /usr/bin/install -c
configure:4739: checking for sed
configure:4758: found /usr/bin/sed
configure:4770: result: /usr/bin/sed
configure:4788: checking for which
configure:4806: found /usr/bin/which
configure:4818: result: /usr/bin/which
configure:4838: checking for less
configure:4856: found /usr/bin/less
configure:4868: result: /usr/bin/less
configure:4891: checking for gtar
configure:4924: result: no
configure:4891: checking for gnutar
configure:4909: found /usr/bin/gnutar
configure:4921: result: /usr/bin/gnutar
configure:4943: checking for tex
configure:4976: result: no
configure:4988: checking for pdftex
configure:5021: result: no
configure:5031: WARNING: you cannot build PDF versions of the R manuals
configure:5038: checking for pdflatex
configure:5071: result: no
configure:5081: WARNING: you cannot build PDF versions of vignettes and help pages
configure:5088: checking for makeindex
configure:5121: result: no
configure:5133: checking for makeinfo
configure:5151: found /usr/bin/makeinfo
configure:5163: result: /usr/bin/makeinfo
configure:5175: checking whether makeinfo version is at least 4.7
configure:5197: result: yes
configure:5204: checking for ginstall-info
configure:5237: result: no
configure:5204: checking for install-info
configure:5222: found /usr/bin/install-info
configure:5234: result: /usr/bin/install-info
configure:5266: checking for texi2dvi
configure:5284: found /usr/bin/texi2dvi
configure:5296: result: /usr/bin/texi2dvi
configure:5316: checking for kpsewhich
configure:5349: result: no
configure:5377: checking for unzip
configure:5395: found /usr/bin/unzip
configure:5407: result: /usr/bin/unzip
configure:5423: checking for zip
configure:5441: found /usr/bin/zip
configure:5453: result: /usr/bin/zip
configure:5469: checking for gzip
configure:5487: found /usr/bin/gzip
configure:5499: result: /usr/bin/gzip
configure:5515: checking for bzip2
configure:5533: found /usr/bin/bzip2
configure:5545: result: /usr/bin/bzip2
configure:5563: checking for firefox
configure:5596: result: no
configure:5563: checking for mozilla
configure:5596: result: no
configure:5563: checking for galeon
configure:5596: result: no
configure:5563: checking for opera
configure:5596: result: no
configure:5563: checking for xdg-open
configure:5596: result: no
configure:5563: checking for kfmclient
configure:5596: result: no
configure:5563: checking for gnome-moz-remote
configure:5596: result: no
configure:5563: checking for open
configure:5581: found /usr/bin/open
configure:5593: result: /usr/bin/open
configure:5610: result: using default browser ... /usr/bin/open
configure:5620: checking for acroread
configure:5653: result: no
configure:5620: checking for acroread4
configure:5653: result: no
configure:5620: checking for xdg-open
configure:5653: result: no
configure:5620: checking for evince
configure:5653: result: no
configure:5620: checking for xpdf
configure:5653: result: no
configure:5620: checking for gv
configure:5653: result: no
configure:5620: checking for gnome-gv
configure:5653: result: no
configure:5620: checking for ggv
configure:5653: result: no
configure:5620: checking for okular
configure:5653: result: no
configure:5620: checking for kpdf
configure:5653: result: no
configure:5620: checking for open
configure:5638: found /usr/bin/open
configure:5650: result: /usr/bin/open
configure:5671: checking for notangle
configure:5702: result: false
configure:5714: checking for pkg-config
configure:5748: result: no
configure:5802: checking for gcc
configure:5818: found /opt/local/bin/gcc
configure:5829: result: gcc
configure:6058: checking for C compiler version
configure:6067: gcc --version >&5
gcc (MacPorts gcc48 4.8.1_3) 4.8.1
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:6078: $? = 0
configure:6067: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/lto-wrapper
Target: x86_64-apple-darwin12
Configured with: /opt/local/var/macports/build/_opt_mports_dports_lang_gcc48/gcc48/work/gcc-4.8.1/configure --prefix=/opt/local --build=x86_64-apple-darwin12 --enable-languages=c,c++,objc,obj-c++,lto,fortran,java --libdir=/opt/local/lib/gcc48 --includedir=/opt/local/include/gcc48 --infodir=/opt/local/share/info --mandir=/opt/local/share/man --datarootdir=/opt/local/share/gcc-4.8 --with-local-prefix=/opt/local --with-system-zlib --disable-nls --program-suffix=-mp-4.8 --with-gxx-include-dir=/opt/local/include/gcc48/c++/ --with-gmp=/opt/local --with-mpfr=/opt/local --with-mpc=/opt/local --with-cloog=/opt/local --enable-cloog-backend=isl --disable-cloog-version-check --enable-stage1-checking --disable-multilib --enable-lto --enable-libstdcxx-time --with-as=/opt/local/bin/as --with-ld=/opt/local/bin/ld --with-ar=/opt/local/bin/ar --with-bugurl=https://trac.macports.org/newticket --with-pkgversion='MacPorts gcc48 4.8.1_3'
Thread model: posix
gcc version 4.8.1 (MacPorts gcc48 4.8.1_3)
configure:6078: $? = 0
configure:6067: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:6078: $? = 1
configure:6067: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:6078: $? = 1
configure:6098: checking whether the C compiler works
configure:6120: gcc -I/opt/local/include -L/opt/local/lib conftest.c >&5
configure:6124: $? = 0
configure:6172: result: yes
configure:6175: checking for C compiler default output file name
configure:6177: result: a.out
configure:6183: checking for suffix of executables
configure:6190: gcc -o conftest -I/opt/local/include -L/opt/local/lib conftest.c >&5
configure:6194: $? = 0
configure:6216: result:
configure:6238: checking whether we are cross compiling
configure:6246: gcc -o conftest -I/opt/local/include -L/opt/local/lib conftest.c >&5
configure:6250: $? = 0
configure:6257: ./conftest
configure:6261: $? = 0
configure:6276: result: no
configure:6281: checking for suffix of object files
configure:6303: gcc -c -I/opt/local/include conftest.c >&5
configure:6307: $? = 0
configure:6328: result: o
configure:6332: checking whether we are using the GNU C compiler
configure:6351: gcc -c -I/opt/local/include conftest.c >&5
configure:6351: $? = 0
configure:6360: result: yes
configure:6369: checking whether gcc accepts -g
configure:6389: gcc -c -g -I/opt/local/include conftest.c >&5
configure:6389: $? = 0
configure:6430: result: yes
configure:6447: checking for gcc option to accept ISO C89
configure:6510: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:6510: $? = 0
configure:6523: result: none needed
configure:6550: checking how to run the C preprocessor
configure:6581: gcc -E -I/opt/local/include conftest.c
configure:6581: $? = 0
configure:6595: gcc -E -I/opt/local/include conftest.c
conftest.c:17:28: fatal error: ac_nonexistent.h: No such file or directory
#include <ac_nonexistent.h>
^
compilation terminated.
configure:6595: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6620: result: gcc -E
configure:6640: gcc -E -I/opt/local/include conftest.c
configure:6640: $? = 0
configure:6654: gcc -E -I/opt/local/include conftest.c
conftest.c:17:28: fatal error: ac_nonexistent.h: No such file or directory
#include <ac_nonexistent.h>
^
compilation terminated.
configure:6654: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6683: checking for grep that handles long lines and -e
configure:6741: result: /usr/bin/grep
configure:6746: checking for egrep
configure:6808: result: /usr/bin/grep -E
configure:6814: checking whether gcc needs -traditional
conftest.c:17:20: fatal error: termio.h: No such file or directory
#include <termio.h>
^
compilation terminated.
configure:6848: result: no
configure:6860: checking how to run the C preprocessor
configure:6930: result: gcc -E
configure:6950: gcc -E -I/opt/local/include conftest.c
configure:6950: $? = 0
configure:6964: gcc -E -I/opt/local/include conftest.c
conftest.c:17:28: fatal error: ac_nonexistent.h: No such file or directory
#include <ac_nonexistent.h>
^
compilation terminated.
configure:6964: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7060: checking for gfortran
configure:7076: found /opt/local/bin/gfortran
configure:7087: result: gfortran
configure:7208: checking for Fortran 77 compiler version
configure:7217: gfortran --version >&5
GNU Fortran (MacPorts gcc48 4.8.1_3) 4.8.1
Copyright (C) 2013 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:7228: $? = 0
configure:7217: gfortran -v >&5
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/lto-wrapper
Target: x86_64-apple-darwin12
Configured with: /opt/local/var/macports/build/_opt_mports_dports_lang_gcc48/gcc48/work/gcc-4.8.1/configure --prefix=/opt/local --build=x86_64-apple-darwin12 --enable-languages=c,c++,objc,obj-c++,lto,fortran,java --libdir=/opt/local/lib/gcc48 --includedir=/opt/local/include/gcc48 --infodir=/opt/local/share/info --mandir=/opt/local/share/man --datarootdir=/opt/local/share/gcc-4.8 --with-local-prefix=/opt/local --with-system-zlib --disable-nls --program-suffix=-mp-4.8 --with-gxx-include-dir=/opt/local/include/gcc48/c++/ --with-gmp=/opt/local --with-mpfr=/opt/local --with-mpc=/opt/local --with-cloog=/opt/local --enable-cloog-backend=isl --disable-cloog-version-check --enable-stage1-checking --disable-multilib --enable-lto --enable-libstdcxx-time --with-as=/opt/local/bin/as --with-ld=/opt/local/bin/ld --with-ar=/opt/local/bin/ar --with-bugurl=https://trac.macports.org/newticket --with-pkgversion='MacPorts gcc48 4.8.1_3'
Thread model: posix
gcc version 4.8.1 (MacPorts gcc48 4.8.1_3)
configure:7228: $? = 0
configure:7217: gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:7228: $? = 1
configure:7217: gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'
gfortran: fatal error: no input files
compilation terminated.
configure:7228: $? = 1
configure:7237: checking whether we are using the GNU Fortran 77 compiler
configure:7250: gfortran -c conftest.F >&5
configure:7250: $? = 0
configure:7259: result: yes
configure:7265: checking whether gfortran accepts -g
configure:7276: gfortran -c -g conftest.f >&5
configure:7276: $? = 0
configure:7284: result: yes
configure:7375: checking for g++
configure:7391: found /opt/local/bin/g++
configure:7402: result: g++
configure:7429: checking for C++ compiler version
configure:7438: g++ --version >&5
g++ (MacPorts gcc48 4.8.1_3) 4.8.1
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:7449: $? = 0
configure:7438: g++ -v >&5
Using built-in specs.
COLLECT_GCC=g++
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/lto-wrapper
Target: x86_64-apple-darwin12
Configured with: /opt/local/var/macports/build/_opt_mports_dports_lang_gcc48/gcc48/work/gcc-4.8.1/configure --prefix=/opt/local --build=x86_64-apple-darwin12 --enable-languages=c,c++,objc,obj-c++,lto,fortran,java --libdir=/opt/local/lib/gcc48 --includedir=/opt/local/include/gcc48 --infodir=/opt/local/share/info --mandir=/opt/local/share/man --datarootdir=/opt/local/share/gcc-4.8 --with-local-prefix=/opt/local --with-system-zlib --disable-nls --program-suffix=-mp-4.8 --with-gxx-include-dir=/opt/local/include/gcc48/c++/ --with-gmp=/opt/local --with-mpfr=/opt/local --with-mpc=/opt/local --with-cloog=/opt/local --enable-cloog-backend=isl --disable-cloog-version-check --enable-stage1-checking --disable-multilib --enable-lto --enable-libstdcxx-time --with-as=/opt/local/bin/as --with-ld=/opt/local/bin/ld --with-ar=/opt/local/bin/ar --with-bugurl=https://trac.macports.org/newticket --with-pkgversion='MacPorts gcc48 4.8.1_3'
Thread model: posix
gcc version 4.8.1 (MacPorts gcc48 4.8.1_3)
configure:7449: $? = 0
configure:7438: g++ -V >&5
g++: error: unrecognized command line option '-V'
g++: fatal error: no input files
compilation terminated.
configure:7449: $? = 1
configure:7438: g++ -qversion >&5
g++: error: unrecognized command line option '-qversion'
g++: fatal error: no input files
compilation terminated.
configure:7449: $? = 1
configure:7453: checking whether we are using the GNU C++ compiler
configure:7472: g++ -c -I/opt/local/include conftest.cpp >&5
configure:7472: $? = 0
configure:7481: result: yes
configure:7490: checking whether g++ accepts -g
configure:7510: g++ -c -g -I/opt/local/include conftest.cpp >&5
configure:7510: $? = 0
configure:7551: result: yes
configure:7579: checking how to run the C++ preprocessor
configure:7606: g++ -E -I/opt/local/include conftest.cpp
configure:7606: $? = 0
configure:7620: g++ -E -I/opt/local/include conftest.cpp
conftest.cpp:17:28: fatal error: ac_nonexistent.h: No such file or directory
#include <ac_nonexistent.h>
^
compilation terminated.
configure:7620: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7645: result: g++ -E
configure:7665: g++ -E -I/opt/local/include conftest.cpp
configure:7665: $? = 0
configure:7679: g++ -E -I/opt/local/include conftest.cpp
conftest.cpp:17:28: fatal error: ac_nonexistent.h: No such file or directory
#include <ac_nonexistent.h>
^
compilation terminated.
configure:7679: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7713: checking whether __attribute__((visibility())) is supported
configure:7724: gcc -Werror -S conftest.c -o conftest.s 1>&5
configure:7727: $? = 0
configure:7736: result: no
configure:7747: checking whether gcc accepts -fvisibility
configure:7763: gcc -c -g -O2 -fvisibility=hidden -I/opt/local/include conftest.c >&5
configure:7763: $? = 0
configure:7770: result: yes
configure:7795: checking whether gfortran accepts -fvisibility
configure:7805: gfortran -c -g -O2 -fvisibility=hidden conftest.f >&5
configure:7805: $? = 0
configure:7812: result: yes
configure:7835: checking for ANSI C header files
configure:7855: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:7855: $? = 0
configure:7928: gcc -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c >&5
configure:7928: $? = 0
configure:7928: ./conftest
configure:7928: $? = 0
configure:7939: result: yes
configure:7952: checking for sys/types.h
configure:7952: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for sys/stat.h
configure:7952: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for stdlib.h
configure:7952: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for string.h
configure:7952: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for memory.h
configure:7952: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for strings.h
configure:7952: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for inttypes.h
configure:7952: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for stdint.h
configure:7952: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7952: checking for unistd.h
configure:7952: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:7952: $? = 0
configure:7952: result: yes
configure:7965: checking minix/config.h usability
configure:7965: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c:60:26: fatal error: minix/config.h: No such file or directory
#include <minix/config.h>
^
compilation terminated.
configure:7965: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <minix/config.h>
configure:7965: result: no
configure:7965: checking minix/config.h presence
configure:7965: gcc -E -I/opt/local/include conftest.c
conftest.c:27:26: fatal error: minix/config.h: No such file or directory
#include <minix/config.h>
^
compilation terminated.
configure:7965: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <minix/config.h>
configure:7965: result: no
configure:7965: checking for minix/config.h
configure:7965: result: no
configure:7986: checking whether it is safe to define __EXTENSIONS__
configure:8004: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:8004: $? = 0
configure:8011: result: yes
configure:8133: checking for Objective C compiler version
configure:8142: gcc -arch x86_64 --version >&5
gcc (MacPorts gcc48 4.8.1_3) 4.8.1
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:8153: $? = 0
configure:8142: gcc -arch x86_64 -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/lto-wrapper
Target: x86_64-apple-darwin12
Configured with: /opt/local/var/macports/build/_opt_mports_dports_lang_gcc48/gcc48/work/gcc-4.8.1/configure --prefix=/opt/local --build=x86_64-apple-darwin12 --enable-languages=c,c++,objc,obj-c++,lto,fortran,java --libdir=/opt/local/lib/gcc48 --includedir=/opt/local/include/gcc48 --infodir=/opt/local/share/info --mandir=/opt/local/share/man --datarootdir=/opt/local/share/gcc-4.8 --with-local-prefix=/opt/local --with-system-zlib --disable-nls --program-suffix=-mp-4.8 --with-gxx-include-dir=/opt/local/include/gcc48/c++/ --with-gmp=/opt/local --with-mpfr=/opt/local --with-mpc=/opt/local --with-cloog=/opt/local --enable-cloog-backend=isl --disable-cloog-version-check --enable-stage1-checking --disable-multilib --enable-lto --enable-libstdcxx-time --with-as=/opt/local/bin/as --with-ld=/opt/local/bin/ld --with-ar=/opt/local/bin/ar --with-bugurl=https://trac.macports.org/newticket --with-pkgversion='MacPorts gcc48 4.8.1_3'
Thread model: posix
gcc version 4.8.1 (MacPorts gcc48 4.8.1_3)
configure:8153: $? = 0
configure:8142: gcc -arch x86_64 -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:8153: $? = 1
configure:8142: gcc -arch x86_64 -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:8153: $? = 1
configure:8157: checking whether we are using the GNU Objective C compiler
configure:8176: gcc -arch x86_64 -c -I/opt/local/include conftest.m >&5
configure:8176: $? = 0
configure:8185: result: yes
configure:8194: checking whether gcc -arch x86_64 accepts -g
configure:8214: gcc -arch x86_64 -c -g -I/opt/local/include conftest.m >&5
configure:8214: $? = 0
configure:8255: result: yes
configure:8314: checking for Objective C++ compiler
configure:8320: result: trying some possibilities
configure:8365: checking whether g++ can compile ObjC++
running: g++ -c conftest.mm -I/opt/local/include
configure:8393: result: yes
configure:8455: result: g++
configure:8524: checking for a sed that does not truncate output
configure:8588: result: /usr/bin/sed
configure:8606: checking for fgrep
configure:8668: result: /usr/bin/grep -F
configure:8696: checking for ld used by gcc
configure:8763: result: /opt/local/bin/ld
configure:8770: checking if the linker (/opt/local/bin/ld) is GNU ld
configure:8785: result: no
configure:8797: checking for BSD- or MS-compatible name lister (nm)
configure:8846: result: /opt/local/bin/nm
configure:8964: checking the name lister (/opt/local/bin/nm) interface
configure:8971: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:8974: /opt/local/bin/nm "conftest.o"
configure:8977: output
0000000000000194 S _some_variable
configure:8984: result: BSD nm
configure:8988: checking the maximum length of command line arguments
configure:9108: result: 196608
configure:9125: checking whether the shell understands some XSI constructs
configure:9135: result: yes
configure:9139: checking whether the shell understands "+="
configure:9145: result: yes
configure:9180: checking for /opt/local/bin/ld option to reload object files
configure:9187: result: -r
configure:9256: checking for objdump
configure:9286: result: no
configure:9315: checking how to recognize dependent libraries
configure:9511: result: pass_all
configure:9676: checking for strip
configure:9692: found /opt/local/bin/strip
configure:9703: result: strip
configure:9775: checking for ranlib
configure:9791: found /opt/local/bin/ranlib
configure:9802: result: ranlib
configure:9892: checking command to parse /opt/local/bin/nm output from gcc object
configure:10010: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:10013: $? = 0
configure:10017: /opt/local/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
configure:10020: $? = 0
cannot find nm_test_var in conftest.nm
configure:10010: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:10013: $? = 0
configure:10017: /opt/local/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' \> conftest.nm
configure:10020: $? = 0
configure:10074: gcc -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c conftstm.o >&5
configure:10077: $? = 0
configure:10115: result: ok
configure:10186: checking for dsymutil
configure:10202: found /usr/bin/dsymutil
configure:10213: result: dsymutil
configure:10278: checking for nmedit
configure:10294: found /opt/local/bin/nmedit
configure:10305: result: nmedit
configure:10370: checking for lipo
configure:10386: found /opt/local/bin/lipo
configure:10397: result: lipo
configure:10462: checking for otool
configure:10478: found /opt/local/bin/otool
configure:10489: result: otool
configure:10554: checking for otool64
configure:10584: result: no
configure:10629: checking for -single_module linker flag
gcc -g -O2 -L/opt/local/lib -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
configure:10656: result: yes
configure:10658: checking for -exported_symbols_list linker flag
configure:10678: gcc -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib -Wl,-exported_symbols_list,conftest.sym conftest.c >&5
configure:10678: $? = 0
configure:10688: result: yes
configure:10727: checking for dlfcn.h
configure:10727: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:10727: $? = 0
configure:10727: result: yes
configure:10852: checking for C++ compiler version
configure:10861: g++ --version >&5
g++ (MacPorts gcc48 4.8.1_3) 4.8.1
Copyright (C) 2013 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:10872: $? = 0
configure:10861: g++ -v >&5
Using built-in specs.
COLLECT_GCC=g++
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/lto-wrapper
Target: x86_64-apple-darwin12
Configured with: /opt/local/var/macports/build/_opt_mports_dports_lang_gcc48/gcc48/work/gcc-4.8.1/configure --prefix=/opt/local --build=x86_64-apple-darwin12 --enable-languages=c,c++,objc,obj-c++,lto,fortran,java --libdir=/opt/local/lib/gcc48 --includedir=/opt/local/include/gcc48 --infodir=/opt/local/share/info --mandir=/opt/local/share/man --datarootdir=/opt/local/share/gcc-4.8 --with-local-prefix=/opt/local --with-system-zlib --disable-nls --program-suffix=-mp-4.8 --with-gxx-include-dir=/opt/local/include/gcc48/c++/ --with-gmp=/opt/local --with-mpfr=/opt/local --with-mpc=/opt/local --with-cloog=/opt/local --enable-cloog-backend=isl --disable-cloog-version-check --enable-stage1-checking --disable-multilib --enable-lto --enable-libstdcxx-time --with-as=/opt/local/bin/as --with-ld=/opt/local/bin/ld --with-ar=/opt/local/bin/ar --with-bugurl=https://trac.macports.org/newticket --with-pkgversion='MacPorts gcc48 4.8.1_3'
Thread model: posix
gcc version 4.8.1 (MacPorts gcc48 4.8.1_3)
configure:10872: $? = 0
configure:10861: g++ -V >&5
g++: error: unrecognized command line option '-V'
g++: fatal error: no input files
compilation terminated.
configure:10872: $? = 1
configure:10861: g++ -qversion >&5
g++: error: unrecognized command line option '-qversion'
g++: fatal error: no input files
compilation terminated.
configure:10872: $? = 1
configure:10876: checking whether we are using the GNU C++ compiler
configure:10904: result: yes
configure:10913: checking whether g++ accepts -g
configure:10974: result: yes
configure:11005: checking how to run the C++ preprocessor
configure:11071: result: g++ -E
configure:11091: g++ -E -I/opt/local/include conftest.cpp
configure:11091: $? = 0
configure:11105: g++ -E -I/opt/local/include conftest.cpp
conftest.cpp:33:28: fatal error: ac_nonexistent.h: No such file or directory
#include <ac_nonexistent.h>
^
compilation terminated.
configure:11105: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:11246: checking for Fortran 77 compiler version
configure:11255: gfortran --version >&5
GNU Fortran (MacPorts gcc48 4.8.1_3) 4.8.1
Copyright (C) 2013 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:11266: $? = 0
configure:11255: gfortran -v >&5
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/lto-wrapper
Target: x86_64-apple-darwin12
Configured with: /opt/local/var/macports/build/_opt_mports_dports_lang_gcc48/gcc48/work/gcc-4.8.1/configure --prefix=/opt/local --build=x86_64-apple-darwin12 --enable-languages=c,c++,objc,obj-c++,lto,fortran,java --libdir=/opt/local/lib/gcc48 --includedir=/opt/local/include/gcc48 --infodir=/opt/local/share/info --mandir=/opt/local/share/man --datarootdir=/opt/local/share/gcc-4.8 --with-local-prefix=/opt/local --with-system-zlib --disable-nls --program-suffix=-mp-4.8 --with-gxx-include-dir=/opt/local/include/gcc48/c++/ --with-gmp=/opt/local --with-mpfr=/opt/local --with-mpc=/opt/local --with-cloog=/opt/local --enable-cloog-backend=isl --disable-cloog-version-check --enable-stage1-checking --disable-multilib --enable-lto --enable-libstdcxx-time --with-as=/opt/local/bin/as --with-ld=/opt/local/bin/ld --with-ar=/opt/local/bin/ar --with-bugurl=https://trac.macports.org/newticket --with-pkgversion='MacPorts gcc48 4.8.1_3'
Thread model: posix
gcc version 4.8.1 (MacPorts gcc48 4.8.1_3)
configure:11266: $? = 0
configure:11255: gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:11266: $? = 1
configure:11255: gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'
gfortran: fatal error: no input files
compilation terminated.
configure:11266: $? = 1
configure:11275: checking whether we are using the GNU Fortran 77 compiler
configure:11297: result: yes
configure:11303: checking whether gfortran accepts -g
configure:11322: result: yes
configure:11500: checking for objdir
configure:11515: result: .libs
configure:11811: checking if gcc supports -fno-rtti -fno-exceptions
configure:11829: gcc -c -g -O2 -I/opt/local/include -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C [enabled by default]
configure:11833: $? = 0
configure:11846: result: no
configure:11866: checking for gcc option to produce PIC
configure:12138: result: -fno-common -DPIC
configure:12150: checking if gcc PIC flag -fno-common -DPIC works
configure:12168: gcc -c -g -O2 -I/opt/local/include -fno-common -DPIC -DPIC conftest.c >&5
configure:12172: $? = 0
configure:12185: result: yes
configure:12209: checking if gcc static flag -static works
configure:12237: result: no
configure:12252: checking if gcc supports -c -o file.o
configure:12273: gcc -c -g -O2 -I/opt/local/include -o out/conftest2.o conftest.c >&5
configure:12277: $? = 0
configure:12299: result: yes
configure:12307: checking if gcc supports -c -o file.o
configure:12354: result: yes
configure:12387: checking whether the gcc linker (/opt/local/bin/ld) supports shared libraries
configure:13373: result: yes
configure:13612: checking dynamic linker characteristics
configure:14263: result: darwin12.4.0 dyld
configure:14365: checking how to hardcode library paths into programs
configure:14390: result: immediate
configure:14910: checking whether stripping libraries is possible
configure:14924: result: yes
configure:14950: checking if libtool supports shared libraries
configure:14952: result: yes
configure:14955: checking whether to build shared libraries
configure:14976: result: yes
configure:14979: checking whether to build static libraries
configure:14983: result: no
configure:15126: checking for ld used by g++
configure:15193: result: /opt/local/bin/ld
configure:15200: checking if the linker (/opt/local/bin/ld) is GNU ld
configure:15215: result: no
configure:15270: checking whether the g++ linker (/opt/local/bin/ld) supports shared libraries
configure:16183: result: yes
configure:16211: g++ -c -g -O2 -I/opt/local/include conftest.cpp >&5
configure:16214: $? = 0
configure:16396: checking for g++ option to produce PIC
configure:16713: result: -fno-common -DPIC
configure:16722: checking if g++ PIC flag -fno-common -DPIC works
configure:16740: g++ -c -g -O2 -I/opt/local/include -fno-common -DPIC -DPIC conftest.cpp >&5
configure:16744: $? = 0
configure:16757: result: yes
configure:16778: checking if g++ static flag -static works
configure:16806: result: no
configure:16818: checking if g++ supports -c -o file.o
configure:16839: g++ -c -g -O2 -I/opt/local/include -o out/conftest2.o conftest.cpp >&5
configure:16843: $? = 0
configure:16865: result: yes
configure:16870: checking if g++ supports -c -o file.o
configure:16917: result: yes
configure:16947: checking whether the g++ linker (/opt/local/bin/ld) supports shared libraries
configure:16973: result: yes
configure:17110: checking dynamic linker characteristics
configure:17709: result: darwin12.4.0 dyld
configure:17760: checking how to hardcode library paths into programs
configure:17785: result: immediate
configure:17926: checking if libtool supports shared libraries
configure:17928: result: yes
configure:17931: checking whether to build shared libraries
configure:17951: result: yes
configure:17954: checking whether to build static libraries
configure:17958: result: no
configure:17972: checking for gfortran option to produce PIC
configure:18244: result: -fno-common
configure:18253: checking if gfortran PIC flag -fno-common works
configure:18271: gfortran -c -g -O2 -fno-common conftest.f >&5
configure:18275: $? = 0
configure:18288: result: yes
configure:18309: checking if gfortran static flag -static works
configure:18337: result: no
configure:18349: checking if gfortran supports -c -o file.o
configure:18370: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5
configure:18374: $? = 0
configure:18396: result: yes
configure:18401: checking if gfortran supports -c -o file.o
configure:18448: result: yes
configure:18478: checking whether the gfortran linker (/opt/local/bin/ld) supports shared libraries
configure:19451: result: yes
configure:19588: checking dynamic linker characteristics
configure:20181: result: darwin12.4.0 dyld
configure:20232: checking how to hardcode library paths into programs
configure:20257: result: immediate
configure:20561: checking for sin in -lm
configure:20586: gcc -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
conftest.c:41:6: warning: conflicting types for built-in function 'sin' [enabled by default]
char sin ();
^
configure:20586: $? = 0
configure:20595: result: yes
configure:20609: checking for library containing dlopen
configure:20640: gcc -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
configure:20640: $? = 0
configure:20657: result: none required
configure:20770: checking readline/history.h usability
configure:20770: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:20770: $? = 0
configure:20770: result: yes
configure:20770: checking readline/history.h presence
configure:20770: gcc -E -I/opt/local/include conftest.c
configure:20770: $? = 0
configure:20770: result: yes
configure:20770: checking for readline/history.h
configure:20770: result: yes
configure:20770: checking readline/readline.h usability
configure:20770: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:20770: $? = 0
configure:20770: result: yes
configure:20770: checking readline/readline.h presence
configure:20770: gcc -E -I/opt/local/include conftest.c
configure:20770: $? = 0
configure:20770: result: yes
configure:20770: checking for readline/readline.h
configure:20770: result: yes
configure:20784: checking for rl_callback_read_char in -lreadline
configure:20809: gcc -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lreadline >&5
configure:20809: $? = 0
configure:20818: result: yes
configure:21002: checking for history_truncate_file
configure:21002: gcc -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lreadline >&5
configure:21002: $? = 0
configure:21002: result: yes
configure:21017: checking whether rl_completion_matches exists and is declared
configure:21039: gcc -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lreadline >&5
configure:21039: $? = 0
configure:21048: result: yes
configure:21066: checking for ANSI C header files
configure:21170: result: yes
configure:21181: checking for dirent.h that defines DIR
configure:21200: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21200: $? = 0
configure:21208: result: yes
configure:21221: checking for library containing opendir
configure:21252: gcc -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
configure:21252: $? = 0
configure:21269: result: none required
configure:21340: checking for sys/wait.h that is POSIX.1 compatible
configure:21366: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21366: $? = 0
configure:21373: result: yes
configure:21400: checking arpa/inet.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking arpa/inet.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for arpa/inet.h
configure:21400: result: yes
configure:21400: checking dl.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c:77:16: fatal error: dl.h: No such file or directory
#include <dl.h>
^
compilation terminated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <dl.h>
configure:21400: result: no
configure:21400: checking dl.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
conftest.c:44:16: fatal error: dl.h: No such file or directory
#include <dl.h>
^
compilation terminated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| /* end confdefs.h. */
| #include <dl.h>
configure:21400: result: no
configure:21400: checking for dl.h
configure:21400: result: no
configure:21400: checking for dlfcn.h
configure:21400: result: yes
configure:21400: checking elf.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c:78:17: fatal error: elf.h: No such file or directory
#include <elf.h>
^
compilation terminated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <elf.h>
configure:21400: result: no
configure:21400: checking elf.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
conftest.c:45:17: fatal error: elf.h: No such file or directory
#include <elf.h>
^
compilation terminated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <elf.h>
configure:21400: result: no
configure:21400: checking for elf.h
configure:21400: result: no
configure:21400: checking fcntl.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking fcntl.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for fcntl.h
configure:21400: result: yes
configure:21400: checking floatingpoint.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c:79:27: fatal error: floatingpoint.h: No such file or directory
#include <floatingpoint.h>
^
compilation terminated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <floatingpoint.h>
configure:21400: result: no
configure:21400: checking floatingpoint.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
conftest.c:46:27: fatal error: floatingpoint.h: No such file or directory
#include <floatingpoint.h>
^
compilation terminated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <floatingpoint.h>
configure:21400: result: no
configure:21400: checking for floatingpoint.h
configure:21400: result: no
configure:21400: checking fpu_control.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c:79:25: fatal error: fpu_control.h: No such file or directory
#include <fpu_control.h>
^
compilation terminated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <fpu_control.h>
configure:21400: result: no
configure:21400: checking fpu_control.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
conftest.c:46:25: fatal error: fpu_control.h: No such file or directory
#include <fpu_control.h>
^
compilation terminated.
configure:21400: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <fpu_control.h>
configure:21400: result: no
configure:21400: checking for fpu_control.h
configure:21400: result: no
configure:21400: checking glob.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking glob.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for glob.h
configure:21400: result: yes
configure:21400: checking grp.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking grp.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for grp.h
configure:21400: result: yes
configure:21400: checking netdb.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking netdb.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for netdb.h
configure:21400: result: yes
configure:21400: checking netinet/in.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking netinet/in.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for netinet/in.h
configure:21400: result: yes
configure:21400: checking pwd.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking pwd.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for pwd.h
configure:21400: result: yes
configure:21400: checking sched.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sched.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sched.h
configure:21400: result: yes
configure:21400: checking for strings.h
configure:21400: result: yes
configure:21400: checking sys/param.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/param.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/param.h
configure:21400: result: yes
configure:21400: checking sys/resource.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/resource.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/resource.h
configure:21400: result: yes
configure:21400: checking sys/select.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/select.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/select.h
configure:21400: result: yes
configure:21400: checking sys/socket.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/socket.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/socket.h
configure:21400: result: yes
configure:21400: checking for sys/stat.h
configure:21400: result: yes
configure:21400: checking sys/time.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/time.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/time.h
configure:21400: result: yes
configure:21400: checking sys/times.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/times.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/times.h
configure:21400: result: yes
configure:21400: checking sys/utsname.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking sys/utsname.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for sys/utsname.h
configure:21400: result: yes
configure:21400: checking for unistd.h
configure:21400: result: yes
configure:21400: checking utime.h usability
configure:21400: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking utime.h presence
configure:21400: gcc -E -I/opt/local/include conftest.c
configure:21400: $? = 0
configure:21400: result: yes
configure:21400: checking for utime.h
configure:21400: result: yes
configure:21418: checking errno.h usability
configure:21418: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking errno.h presence
configure:21418: gcc -E -I/opt/local/include conftest.c
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking for errno.h
configure:21418: result: yes
configure:21418: checking for inttypes.h
configure:21418: result: yes
configure:21418: checking limits.h usability
configure:21418: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking limits.h presence
configure:21418: gcc -E -I/opt/local/include conftest.c
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking for limits.h
configure:21418: result: yes
configure:21418: checking locale.h usability
configure:21418: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking locale.h presence
configure:21418: gcc -E -I/opt/local/include conftest.c
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking for locale.h
configure:21418: result: yes
configure:21418: checking stdarg.h usability
configure:21418: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking stdarg.h presence
configure:21418: gcc -E -I/opt/local/include conftest.c
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking for stdarg.h
configure:21418: result: yes
configure:21418: checking stdbool.h usability
configure:21418: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking stdbool.h presence
configure:21418: gcc -E -I/opt/local/include conftest.c
configure:21418: $? = 0
configure:21418: result: yes
configure:21418: checking for stdbool.h
configure:21418: result: yes
configure:21418: checking for stdint.h
configure:21418: result: yes
configure:21418: checking for string.h
configure:21418: result: yes
configure:21431: checking whether setjmp.h is POSIX.1 compatible
configure:21449: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21449: $? = 0
configure:21456: result: yes
configure:21458: checking whether sigsetjmp is declared
configure:21458: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21458: $? = 0
configure:21458: result: yes
configure:21469: checking whether siglongjmp is declared
configure:21469: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21469: $? = 0
configure:21469: result: yes
configure:21493: checking for GNU C library with version >= 2
configure:21516: result: no
configure:21527: checking return type of signal handlers
configure:21545: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:80:1: error: void value not ignored as it ought to be
return *(signal (0, 0)) (0) == 1;
^
configure:21545: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <signal.h>
|
| int
| main ()
| {
| return *(signal (0, 0)) (0) == 1;
| ;
| return 0;
| }
configure:21552: result: void
configure:21561: checking for uint64_t
configure:21561: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21561: $? = 0
configure:21561: result: yes
configure:21575: checking for pid_t
configure:21575: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21575: $? = 0
configure:21575: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:111:20: error: expected expression before ')' token
if (sizeof ((pid_t)))
^
configure:21575: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((pid_t)))
| return 0;
| ;
| return 0;
| }
configure:21575: result: yes
configure:21586: checking for size_t
configure:21586: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21586: $? = 0
configure:21586: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:111:21: error: expected expression before ')' token
if (sizeof ((size_t)))
^
configure:21586: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((size_t)))
| return 0;
| ;
| return 0;
| }
configure:21586: result: yes
configure:21597: checking whether SIZE_MAX is declared
configure:21630: gcc -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
configure:21630: $? = 0
configure:21630: ./conftest
configure:21630: $? = 0
configure:21640: result: yes
configure:21648: checking for blkcnt_t
configure:21648: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21648: $? = 0
configure:21648: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:112:23: error: expected expression before ')' token
if (sizeof ((blkcnt_t)))
^
configure:21648: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((blkcnt_t)))
| return 0;
| ;
| return 0;
| }
configure:21648: result: yes
configure:21660: checking for type of socket length
configure:21686: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21686: $? = 0
configure:21706: result: socklen_t *
configure:21715: checking for stack_t
configure:21715: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21715: $? = 0
configure:21715: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:82:22: error: expected expression before ')' token
if (sizeof ((stack_t)))
^
configure:21715: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| /* end confdefs.h. */
| #include <signal.h>
|
| int
| main ()
| {
| if (sizeof ((stack_t)))
| return 0;
| ;
| return 0;
| }
configure:21715: result: yes
configure:21731: checking for intptr_t
configure:21731: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21731: $? = 0
configure:21731: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:88:23: error: expected expression before ')' token
if (sizeof ((intptr_t)))
^
configure:21731: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| /* end confdefs.h. */
| #ifdef HAVE_INTTYPES_H
| #include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| #include <stdint.h>
| #endif
|
| int
| main ()
| {
| if (sizeof ((intptr_t)))
| return 0;
| ;
| return 0;
| }
configure:21731: result: yes
configure:21746: checking for uintptr_t
configure:21746: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21746: $? = 0
configure:21746: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:89:24: error: expected expression before ')' token
if (sizeof ((uintptr_t)))
^
configure:21746: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| /* end confdefs.h. */
| #ifdef HAVE_INTTYPES_H
| #include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| #include <stdint.h>
| #endif
|
| int
| main ()
| {
| if (sizeof ((uintptr_t)))
| return 0;
| ;
| return 0;
| }
configure:21746: result: yes
configure:21769: checking whether byte ordering is bigendian
configure:21792: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21792: $? = 0
configure:21810: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:87:2: error: unknown type name 'not'
not big endian
^
conftest.c:87:10: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'endian'
not big endian
^
configure:21810: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/param.h>
|
| int
| main ()
| {
| #if BYTE_ORDER != BIG_ENDIAN
| not big endian
| #endif
|
| ;
| return 0;
| }
configure:21884: result: no
configure:21898: checking for an ANSI C-conforming const
configure:21964: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
configure:21964: $? = 0
configure:21971: result: yes
configure:21983: checking for gcc option to accept ISO C99
configure:22132: gcc -c -g -O2 -I/opt/local/include conftest.c >&5
conftest.c:130:29: error: expected ';', ',' or ')' before 'text'
test_restrict (ccp restrict text)
^
conftest.c: In function 'main':
conftest.c:184:18: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'newvar'
char *restrict newvar = "Another string";
^
conftest.c:184:18: error: 'newvar' undeclared (first use in this function)
conftest.c:184:18: note: each undeclared identifier is reported only once for each function it appears in
conftest.c:194:3: error: 'for' loop initial declarations are only allowed in C99 mode
for (int i = 0; i < ia->datasize; ++i)
^
conftest.c:194:3: note: use option -std=c99 or -std=gnu99 to compile your code
configure:22132: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| /* end confdefs.h. */
| #include <stdarg.h>
| #include <stdbool.h>
| #include <stdlib.h>
| #include <wchar.h>
| #include <stdio.h>
|
| // Check varargs macros. These examples are taken from C99 6.10.3.5.
| #define debug(...) fprintf (stderr, __VA_ARGS__)
| #define showlist(...) puts (#__VA_ARGS__)
| #define report(test,...) ((test) ? puts (#test) : printf (__VA_ARGS__))
| static void
| test_varargs_macros (void)
| {
| int x = 1234;
| int y = 5678;
| debug ("Flag");
| debug ("X = %d\n", x);
| showlist (The first, second, and third items.);
| report (x>y, "x is %d but y is %d", x, y);
| }
|
| // Check long long types.
| #define BIG64 18446744073709551615ull
| #define BIG32 4294967295ul
| #define BIG_OK (BIG64 / BIG32 == 4294967297ull && BIG64 % BIG32 == 0)
| #if !BIG_OK
| your preprocessor is broken;
| #endif
| #if BIG_OK
| #else
| your preprocessor is broken;
| #endif
| static long long int bignum = -9223372036854775807LL;
| static unsigned long long int ubignum = BIG64;
|
| struct incomplete_array
| {
| int datasize;
| double data[];
| };
|
| struct named_init {
| int number;
| const wchar_t *name;
| double average;
| };
|
| typedef const char *ccp;
|
| static inline int
| test_restrict (ccp restrict text)
| {
| // See if C++-style comments work.
| // Iterate through items via the restricted pointer.
| // Also check for declarations in for loops.
| for (unsigned int i = 0; *(text+i) != '\0'; ++i)
| continue;
| return 0;
| }
|
| // Check varargs and va_copy.
| static void
| test_varargs (const char *format, ...)
| {
| va_list args;
| va_start (args, format);
| va_list args_copy;
| va_copy (args_copy, args);
|
| const char *str;
| int number;
| float fnumber;
|
| while (*format)
| {
| switch (*format++)
| {
| case 's': // string
| str = va_arg (args_copy, const char *);
| break;
| case 'd': // int
| number = va_arg (args_copy, int);
| break;
| case 'f': // float
| fnumber = va_arg (args_copy, double);
| break;
| default:
| break;
| }
| }
| va_end (args_copy);
| va_end (args);
| }
|
| int
| main ()
| {
|
| // Check bool.
| _Bool success = false;
|
| // Check restrict.
| if (test_restrict ("String literal") == 0)
| success = true;
| char *restrict newvar = "Another string";
|
| // Check varargs.
| test_varargs ("s, d' f .", "string", 65, 34.234);
| test_varargs_macros ();
|
| // Check flexible array members.
| struct incomplete_array *ia =
| malloc (sizeof (struct incomplete_array) + (sizeof (double) * 10));
| ia->datasize = 10;
| for (int i = 0; i < ia->datasize; ++i)
| ia->data[i] = i * 1.234;
|
| // Check named initializers.
| struct named_init ni = {
| .number = 34,
| .name = L"Test wide string",
| .average = 543.34343,
| };
|
| ni.number = 58;
|
| int dynamic_array[ni.number];
| dynamic_array[ni.number - 1] = 543;
|
| // work around unused variable warnings
| return (!success || bignum == 0LL || ubignum == 0uLL || newvar[0] == 'x'
| || dynamic_array[ni.number - 1] != 543);
|
| ;
| return 0;
| }
configure:22132: gcc -std=gnu99 -c -g -O2 -I/opt/local/include conftest.c >&5
configure:22132: $? = 0
configure:22152: result: -std=gnu99
configure:22253: checking for gcc -std=gnu99 option to accept ISO Standard C
configure:22267: result: -std=gnu99
configure:22271: checking for inline
configure:22286: gcc -std=gnu99 -c -g -O2 -I/opt/local/include conftest.c >&5
configure:22286: $? = 0
configure:22293: result: inline
configure:22309: checking size of int
configure:22314: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
configure:22314: $? = 0
configure:22314: ./conftest
configure:22314: $? = 0
configure:22328: result: 4
configure:22350: checking size of long
configure:22355: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
configure:22355: $? = 0
configure:22355: ./conftest
configure:22355: $? = 0
configure:22369: result: 8
configure:22383: checking size of long long
configure:22388: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
configure:22388: $? = 0
configure:22388: ./conftest
configure:22388: $? = 0
configure:22402: result: 8
configure:22416: checking size of double
configure:22421: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
configure:22421: $? = 0
configure:22421: ./conftest
configure:22421: $? = 0
configure:22435: result: 8
configure:22449: checking size of size_t
configure:22454: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
configure:22454: $? = 0
configure:22454: ./conftest
configure:22454: $? = 0
configure:22468: result: 8
configure:22498: checking size of long double
configure:22503: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
configure:22503: $? = 0
configure:22503: ./conftest
configure:22503: $? = 0
configure:22517: result: 16
configure:22533: checking whether we can compute C Make dependencies
configure:22571: result: yes, using $(CC) -MM
configure:22595: checking whether gcc -std=gnu99 supports -c -o FILE.lo
configure:22605: gcc -std=gnu99 -g -O2 -c conftest.c -o TMP/conftest.lo 1>&5
configure:22608: $? = 0
configure:22611: gcc -std=gnu99 -g -O2 -c conftest.c -o TMP/conftest.lo 1>&5
configure:22614: $? = 0
configure:22622: result: yes
configure:22651: checking for gcc -std=gnu99 option to support OpenMP
configure:22666: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
conftest.c:91:2: error: unknown type name 'choke'
choke me
^
In file included from conftest.c:93:0:
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:34:1: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'typedef'
typedef struct
^
configure:22666: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22684: gcc -std=gnu99 -o conftest -g -O2 -fopenmp -I/opt/local/include -L/opt/local/lib conftest.c -lm >&5
configure:22684: $? = 0
configure:22698: result: -fopenmp
configure:22729: checking how to get verbose linking output from gfortran
configure:22739: gfortran -c -g -O2 conftest.f >&5
configure:22739: $? = 0
configure:22757: gfortran -o conftest -g -O2 -v -L/opt/local/lib conftest.f
Using built-in specs.
Target: x86_64-apple-darwin12
Thread model: posix
gcc version 4.8.1 (MacPorts gcc48 4.8.1_3)
/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/f951 conftest.f -ffixed-form -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.f -mmacosx-version-min=10.8.4 -mtune=core2 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/finclude -o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccSFI8Ak.s
GNU Fortran (MacPorts gcc48 4.8.1_3) version 4.8.1 (x86_64-apple-darwin12)
compiled by GNU C version 4.8.1, GMP version 5.1.2, MPFR version 3.1.1-p2, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
GNU Fortran (MacPorts gcc48 4.8.1_3) version 4.8.1 (x86_64-apple-darwin12)
compiled by GNU C version 4.8.1, GMP version 5.1.2, MPFR version 3.1.1-p2, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
/opt/local/bin/as -v -arch x86_64 -force_cpusubtype_ALL -o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccJJvtAO.o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccSFI8Ak.s
Apple Inc version cctools-839, GNU assembler version 1.38
Reading specs from /opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../../libgfortran.spec
rename spec lib to liborig
/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/collect2 -dynamic -arch x86_64 -macosx_version_min 10.8.4 -weak_reference_mismatches non-weak -o conftest -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../.. /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccJJvtAO.o -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym
collect2 version 4.8.1
/opt/local/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.8.4 -weak_reference_mismatches non-weak -o conftest -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../.. /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccJJvtAO.o -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v
@(#)PROGRAM:ld PROJECT:ld64-136
configured to support archs: i386 x86_64 armv7 armv7s
Library search paths:
/opt/local/lib
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1
/opt/local/lib/gcc48
/usr/lib
/usr/local/lib
Framework search paths:
/Library/Frameworks/
/System/Library/Frameworks/
dsymutil conftest
configure:22840: result: -v
configure:22842: checking for Fortran 77 libraries of gfortran
configure:22865: gfortran -o conftest -g -O2 -v -L/opt/local/lib conftest.f
Using built-in specs.
Target: x86_64-apple-darwin12
Thread model: posix
gcc version 4.8.1 (MacPorts gcc48 4.8.1_3)
/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/f951 conftest.f -ffixed-form -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.f -mmacosx-version-min=10.8.4 -mtune=core2 -auxbase conftest -g -O2 -version -fintrinsic-modules-path /opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/finclude -o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccT4c9V5.s
GNU Fortran (MacPorts gcc48 4.8.1_3) version 4.8.1 (x86_64-apple-darwin12)
compiled by GNU C version 4.8.1, GMP version 5.1.2, MPFR version 3.1.1-p2, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
GNU Fortran (MacPorts gcc48 4.8.1_3) version 4.8.1 (x86_64-apple-darwin12)
compiled by GNU C version 4.8.1, GMP version 5.1.2, MPFR version 3.1.1-p2, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
/opt/local/bin/as -v -arch x86_64 -force_cpusubtype_ALL -o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//cc07XrdG.o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccT4c9V5.s
Apple Inc version cctools-839, GNU assembler version 1.38
Reading specs from /opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../../libgfortran.spec
rename spec lib to liborig
/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/collect2 -dynamic -arch x86_64 -macosx_version_min 10.8.4 -weak_reference_mismatches non-weak -o conftest -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../.. /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//cc07XrdG.o -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym
collect2 version 4.8.1
/opt/local/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.8.4 -weak_reference_mismatches non-weak -o conftest -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../.. /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//cc07XrdG.o -lgfortran -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lquadmath -lm -lgcc_ext.10.5 -lgcc -lSystem -v
@(#)PROGRAM:ld PROJECT:ld64-136
configured to support archs: i386 x86_64 armv7 armv7s
Library search paths:
/opt/local/lib
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1
/opt/local/lib/gcc48
/usr/lib
/usr/local/lib
Framework search paths:
/Library/Frameworks/
/System/Library/Frameworks/
dsymutil conftest
configure:23061: result: -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../.. -lgfortran -lquadmath -lm
configure:23079: checking how to get verbose linking output from gcc -std=gnu99
configure:23095: gcc -std=gnu99 -c -g -O2 -I/opt/local/include conftest.c >&5
configure:23095: $? = 0
configure:23117: gcc -std=gnu99 -o conftest -g -O2 -v -I/opt/local/include -L/opt/local/lib conftest.c >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/lto-wrapper
Target: x86_64-apple-darwin12
Configured with: /opt/local/var/macports/build/_opt_mports_dports_lang_gcc48/gcc48/work/gcc-4.8.1/configure --prefix=/opt/local --build=x86_64-apple-darwin12 --enable-languages=c,c++,objc,obj-c++,lto,fortran,java --libdir=/opt/local/lib/gcc48 --includedir=/opt/local/include/gcc48 --infodir=/opt/local/share/info --mandir=/opt/local/share/man --datarootdir=/opt/local/share/gcc-4.8 --with-local-prefix=/opt/local --with-system-zlib --disable-nls --program-suffix=-mp-4.8 --with-gxx-include-dir=/opt/local/include/gcc48/c++/ --with-gmp=/opt/local --with-mpfr=/opt/local --with-mpc=/opt/local --with-cloog=/opt/local --enable-cloog-backend=isl --disable-cloog-version-check --enable-stage1-checking --disable-multilib --enable-lto --enable-libstdcxx-time --with-as=/opt/local/bin/as --with-ld=/opt/local/bin/ld --with-ar=/opt/local/bin/ar --with-bugurl=https://trac.macports.org/newticket --with-pkgversion='MacPorts gcc48 4.8.1_3'
Thread model: posix
gcc version 4.8.1 (MacPorts gcc48 4.8.1_3)
COLLECT_GCC_OPTIONS='-mmacosx-version-min=10.8.4' '-std=gnu99' '-o' 'conftest' '-g' '-O2' '-v' '-I' '/opt/local/include' '-L/opt/local/lib' '-mtune=core2'
/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/cc1 -quiet -v -I /opt/local/include -D__DYNAMIC__ conftest.c -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.c -mmacosx-version-min=10.8.4 -mtune=core2 -auxbase conftest -g -O2 -std=gnu99 -version -o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccafisgy.s
GNU C (MacPorts gcc48 4.8.1_3) version 4.8.1 (x86_64-apple-darwin12)
compiled by GNU C version 4.8.1, GMP version 5.1.2, MPFR version 3.1.1-p2, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
ignoring nonexistent directory "/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../../../../x86_64-apple-darwin12/include"
ignoring duplicate directory "/opt/local/include"
as it is a non-system directory that duplicates a system directory
#include "..." search starts here:
#include <...> search starts here:
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include
/opt/local/include
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include-fixed
/usr/include
/System/Library/Frameworks
/Library/Frameworks
End of search list.
GNU C (MacPorts gcc48 4.8.1_3) version 4.8.1 (x86_64-apple-darwin12)
compiled by GNU C version 4.8.1, GMP version 5.1.2, MPFR version 3.1.1-p2, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
Compiler executable checksum: f5ba302725743f33277db4b713c26b2a
COLLECT_GCC_OPTIONS='-mmacosx-version-min=10.8.4' '-std=gnu99' '-o' 'conftest' '-g' '-O2' '-v' '-I' '/opt/local/include' '-L/opt/local/lib' '-mtune=core2'
/opt/local/bin/as -v -I /opt/local/include -arch x86_64 -force_cpusubtype_ALL -o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccRB6Pnl.o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccafisgy.s
Apple Inc version cctools-839, GNU assembler version 1.38
COMPILER_PATH=/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/:/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/:/opt/local/libexec/gcc/x86_64-apple-darwin12/:/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/:/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/
LIBRARY_PATH=/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/:/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../../:/usr/lib/
COLLECT_GCC_OPTIONS='-mmacosx-version-min=10.8.4' '-std=gnu99' '-o' 'conftest' '-g' '-O2' '-v' '-I' '/opt/local/include' '-L/opt/local/lib' '-mtune=core2'
/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/collect2 -dynamic -arch x86_64 -macosx_version_min 10.8.4 -weak_reference_mismatches non-weak -o conftest -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../.. /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccRB6Pnl.o -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym
collect2 version 4.8.1
/opt/local/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.8.4 -weak_reference_mismatches non-weak -o conftest -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../.. /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccRB6Pnl.o -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lSystem -v
@(#)PROGRAM:ld PROJECT:ld64-136
configured to support archs: i386 x86_64 armv7 armv7s
Library search paths:
/opt/local/lib
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1
/opt/local/lib/gcc48
/usr/lib
/usr/local/lib
Framework search paths:
/Library/Frameworks/
/System/Library/Frameworks/
dsymutil conftest
configure:23163: result: -v
configure:23165: checking for C libraries of gcc -std=gnu99
configure:23192: gcc -std=gnu99 -o conftest -g -O2 -v -I/opt/local/include -L/opt/local/lib conftest.c >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/lto-wrapper
Target: x86_64-apple-darwin12
Configured with: /opt/local/var/macports/build/_opt_mports_dports_lang_gcc48/gcc48/work/gcc-4.8.1/configure --prefix=/opt/local --build=x86_64-apple-darwin12 --enable-languages=c,c++,objc,obj-c++,lto,fortran,java --libdir=/opt/local/lib/gcc48 --includedir=/opt/local/include/gcc48 --infodir=/opt/local/share/info --mandir=/opt/local/share/man --datarootdir=/opt/local/share/gcc-4.8 --with-local-prefix=/opt/local --with-system-zlib --disable-nls --program-suffix=-mp-4.8 --with-gxx-include-dir=/opt/local/include/gcc48/c++/ --with-gmp=/opt/local --with-mpfr=/opt/local --with-mpc=/opt/local --with-cloog=/opt/local --enable-cloog-backend=isl --disable-cloog-version-check --enable-stage1-checking --disable-multilib --enable-lto --enable-libstdcxx-time --with-as=/opt/local/bin/as --with-ld=/opt/local/bin/ld --with-ar=/opt/local/bin/ar --with-bugurl=https://trac.macports.org/newticket --with-pkgversion='MacPorts gcc48 4.8.1_3'
Thread model: posix
gcc version 4.8.1 (MacPorts gcc48 4.8.1_3)
COLLECT_GCC_OPTIONS='-mmacosx-version-min=10.8.4' '-std=gnu99' '-o' 'conftest' '-g' '-O2' '-v' '-I' '/opt/local/include' '-L/opt/local/lib' '-mtune=core2'
/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/cc1 -quiet -v -I /opt/local/include -D__DYNAMIC__ conftest.c -fPIC -feliminate-unused-debug-symbols -quiet -dumpbase conftest.c -mmacosx-version-min=10.8.4 -mtune=core2 -auxbase conftest -g -O2 -std=gnu99 -version -o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccJfdV0A.s
GNU C (MacPorts gcc48 4.8.1_3) version 4.8.1 (x86_64-apple-darwin12)
compiled by GNU C version 4.8.1, GMP version 5.1.2, MPFR version 3.1.1-p2, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
ignoring nonexistent directory "/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../../../../x86_64-apple-darwin12/include"
ignoring duplicate directory "/opt/local/include"
as it is a non-system directory that duplicates a system directory
#include "..." search starts here:
#include <...> search starts here:
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include
/opt/local/include
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include-fixed
/usr/include
/System/Library/Frameworks
/Library/Frameworks
End of search list.
GNU C (MacPorts gcc48 4.8.1_3) version 4.8.1 (x86_64-apple-darwin12)
compiled by GNU C version 4.8.1, GMP version 5.1.2, MPFR version 3.1.1-p2, MPC version 1.0.1
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
Compiler executable checksum: f5ba302725743f33277db4b713c26b2a
COLLECT_GCC_OPTIONS='-mmacosx-version-min=10.8.4' '-std=gnu99' '-o' 'conftest' '-g' '-O2' '-v' '-I' '/opt/local/include' '-L/opt/local/lib' '-mtune=core2'
/opt/local/bin/as -v -I /opt/local/include -arch x86_64 -force_cpusubtype_ALL -o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//cc7JHGu6.o /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//ccJfdV0A.s
Apple Inc version cctools-839, GNU assembler version 1.38
COMPILER_PATH=/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/:/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/:/opt/local/libexec/gcc/x86_64-apple-darwin12/:/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/:/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/
LIBRARY_PATH=/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/:/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../../:/usr/lib/
COLLECT_GCC_OPTIONS='-mmacosx-version-min=10.8.4' '-std=gnu99' '-o' 'conftest' '-g' '-O2' '-v' '-I' '/opt/local/include' '-L/opt/local/lib' '-mtune=core2'
/opt/local/libexec/gcc/x86_64-apple-darwin12/4.8.1/collect2 -dynamic -arch x86_64 -macosx_version_min 10.8.4 -weak_reference_mismatches non-weak -o conftest -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../.. /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//cc7JHGu6.o -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lSystem -v -idsym -dsym
collect2 version 4.8.1
/opt/local/bin/ld -dynamic -arch x86_64 -macosx_version_min 10.8.4 -weak_reference_mismatches non-weak -o conftest -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../.. /var/folders/n9/zxfxcd01557dc06bf3c1njy00000gn/T//cc7JHGu6.o -no_compact_unwind -lSystem -lgcc_ext.10.5 -lgcc -lSystem -v
@(#)PROGRAM:ld PROJECT:ld64-136
configured to support archs: i386 x86_64 armv7 armv7s
Library search paths:
/opt/local/lib
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1
/opt/local/lib/gcc48
/usr/lib
/usr/local/lib
Framework search paths:
/Library/Frameworks/
/System/Library/Frameworks/
dsymutil conftest
configure:23343: result: -L/opt/local/lib -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1 -L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/../../.. -lSystem -lgcc_ext.10.5
configure:23478: checking for dummy main to link with Fortran 77 libraries
configure:23512: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c -lm -lgfortran -lquadmath -lm >&5
configure:23512: $? = 0
configure:23557: result: none
configure:23590: checking for Fortran 77 name-mangling scheme
configure:23603: gfortran -c -g -O2 conftest.f >&5
configure:23603: $? = 0
configure:23644: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c cfortran_test.o -lm -lgfortran -lquadmath -lm >&5
Undefined symbols for architecture x86_64:
"_foobar", referenced from:
_main in ccwhWLQe.o
(maybe you meant: _foobar_)
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
configure:23644: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char foobar ();
| #ifdef F77_DUMMY_MAIN
|
| # ifdef __cplusplus
| extern "C"
| # endif
| int F77_DUMMY_MAIN() { return 1; }
|
| #endif
| int
| main ()
| {
| return foobar ();
| ;
| return 0;
| }
configure:23644: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c cfortran_test.o -lm -lgfortran -lquadmath -lm >&5
configure:23644: $? = 0
configure:23702: gcc -std=gnu99 -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.c cfortran_test.o -lm -lgfortran -lquadmath -lm >&5
configure:23702: $? = 0
configure:23744: result: lower case, underscore, no extra underscore
configure:23821: checking whether gfortran appends underscores to external names
configure:23837: result: yes
configure:23849: checking whether gfortran appends extra underscores to external names
configure:23865: result: no
configure:23879: checking whether mixed C/Fortran code can be run
configure:23937: result: yes
configure:23951: checking whether gfortran and gcc -std=gnu99 agree on int and double
configure:24029: result: yes
configure:24043: checking whether gfortran and gcc -std=gnu99 agree on double complex
configure:24119: result: yes
configure:24154: checking for gfortran option to support OpenMP
configure:24169: gfortran -o conftest -g -O2 -L/opt/local/lib conftest.f -lm >&5
conftest.f:5.9:
tid = 42
1
Error: Symbol 'tid' at (1) has no IMPLICIT type
configure:24169: $? = 1
configure: failed program was:
|
| program main
| implicit none
| !$ integer tid
| tid = 42
| call omp_set_num_threads(2)
| end
|
configure:24187: gfortran -o conftest -g -O2 -fopenmp -L/opt/local/lib conftest.f -lm >&5
configure:24187: $? = 0
configure:24201: result: -fopenmp
configure:24223: checking whether g++ accepts -M for generating dependencies
configure:24238: result: yes
configure:24283: checking for g++ option to support OpenMP
configure:24298: g++ -o conftest -g -O2 -I/opt/local/include -L/opt/local/lib conftest.cpp -lm >&5
conftest.cpp:95:2: error: 'choke' does not name a type
choke me
^
In file included from conftest.cpp:97:0:
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:38:3: error: 'omp_lock_t' does not name a type
} omp_lock_t;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:76:28: error: variable or field 'omp_init_lock' declared void
extern void omp_init_lock (omp_lock_t *) __GOMP_NOTHROW;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:76:28: error: 'omp_lock_t' was not declared in this scope
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:76:40: error: expected primary-expression before ')' token
extern void omp_init_lock (omp_lock_t *) __GOMP_NOTHROW;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:77:31: error: variable or field 'omp_destroy_lock' declared void
extern void omp_destroy_lock (omp_lock_t *) __GOMP_NOTHROW;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:77:31: error: 'omp_lock_t' was not declared in this scope
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:77:43: error: expected primary-expression before ')' token
extern void omp_destroy_lock (omp_lock_t *) __GOMP_NOTHROW;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:78:27: error: variable or field 'omp_set_lock' declared void
extern void omp_set_lock (omp_lock_t *) __GOMP_NOTHROW;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:78:27: error: 'omp_lock_t' was not declared in this scope
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:78:39: error: expected primary-expression before ')' token
extern void omp_set_lock (omp_lock_t *) __GOMP_NOTHROW;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:79:29: error: variable or field 'omp_unset_lock' declared void
extern void omp_unset_lock (omp_lock_t *) __GOMP_NOTHROW;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:79:29: error: 'omp_lock_t' was not declared in this scope
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:79:41: error: expected primary-expression before ')' token
extern void omp_unset_lock (omp_lock_t *) __GOMP_NOTHROW;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:80:27: error: 'omp_lock_t' was not declared in this scope
extern int omp_test_lock (omp_lock_t *) __GOMP_NOTHROW;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:80:39: error: expected primary-expression before ')' token
extern int omp_test_lock (omp_lock_t *) __GOMP_NOTHROW;
^
/opt/local/lib/gcc48/gcc/x86_64-apple-darwin12/4.8.1/include/omp.h:80:41: error: expected ',' or ';' before 'throw'
extern int omp_test_lock (omp_lock_t *) __GOMP_NOTHROW;
^
configure:24298: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.1"
| #define PACKAGE_STRING "R 3.0.1"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.1"
| #define R_PLATFORM "x86_64-apple-darwin12.4.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin12.4.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1