Created
May 5, 2015 07:59
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| ABYSS -k60 -q3 -v --coverage-hist=coverage.hist -s mappedR_XRQrefSF099_SEPE-bubbles.fa -o mappedR_XRQrefSF099_SEPE-1.fa final_bwa_refXRQ_SF099_primALN_mapped_PE.fq final_bwa_refXRQ_SF099_primALN_mapped_SE.fq | |
| ABySS 1.5.2 | |
| Reading `final_bwa_refXRQ_SF099_primALN_mapped_PE.fq'... | |
| Read 100000 reads. Hash load: 3812904 / 1073741824 = 0.00355 using 482 MB | |
| Read 5100000 reads. Hash load: 156329408 / 1073741824 = 0.146 using 4.72 GB | |
| ... | |
| Read 4800000 reads. Hash load: 148139019 / 1073741824 = 0.138 using 4.55 GB | |
| Read 4800000 reads. Hash load: 148139019 / 1073741824 = 0.138 using 4.55 GB | |
| Read 4500000 reads. Hash load: 139824327 / 1073741824 = 0.13 using 4.36 GB | |
| Read 4800000 reads. Hash load: 148139019 / 1073741824 = 0.138 using 4.55 GB | |
| Read 4300000 reads. Hash load: 134225708 / 1073741824 = 0.125 using 4.23 GB | |
| ------------------------------------------------------- | |
| Primary job terminated normally, but 1 process returned | |
| a non-zero exit code.. Per user-direction, the job has been aborted. | |
| ------------------------------------------------------- | |
| Read 4800000 reads. Hash load: 148139019 / 1073741824 = 0.138 using 4.55 GB | |
| Read 4900000 reads. Hash load: 150877230 / 1073741824 = 0.141 using 4.6 GB | |
| Read 4900000 reads. Hash load: 150877230 / 1073741824 = 0.141 using 4.6 GB | |
| Read 5000000 reads. Hash load: 153597524 / 1073741824 = 0.143 using 4.66 GB | |
| Read 5200000 reads. Hash load: 159060550 / 1073741824 = 0.148 using 4.78 GB | |
| Read 5300000 reads. Hash load: 161777571 / 1073741824 = 0.151 using 4.84 GB | |
| Read 4900000 reads. Hash load: 150877230 / 1073741824 = 0.141 using 4.6 GB | |
| Read 4400000 reads. Hash load: 137029057 / 1073741824 = 0.128 using 4.3 GB | |
| Read 4900000 reads. Hash load: 150877230 / 1073741824 = 0.141 using 4.6 GB | |
| Read 4900000 reads. Hash load: 150877230 / 1073741824 = 0.141 using 4.6 GB | |
| Read 4600000 reads. Hash load: 142605340 / 1073741824 = 0.133 using 4.42 GB | |
| Read 3900000 reads. Hash load: 122979009 / 1073741824 = 0.115 using 3.95 GB | |
| Read 5100000 reads. Hash load: 156329408 / 1073741824 = 0.146 using 4.72 GB | |
| Read 5200000 reads. Hash load: 159060550 / 1073741824 = 0.148 using 4.78 GB | |
| Read 4700000 reads. Hash load: 145375696 / 1073741824 = 0.135 using 4.48 GB | |
| Read 4800000 reads. Hash load: 148139019 / 1073741824 = 0.138 using 4.55 GB | |
| Read 4500000 reads. Hash load: 139824327 / 1073741824 = 0.13 using 4.36 GB | |
| Read 4600000 reads. Hash load: 142605340 / 1073741824 = 0.133 using 4.42 GB | |
| Read 4700000 reads. Hash load: 145375696 / 1073741824 = 0.135 using 4.48 GB | |
| Read 4800000 reads. Hash load: 148139019 / 1073741824 = 0.138 using 4.55 GB | |
| Read 5000000 reads. Hash load: 153597524 / 1073741824 = 0.143 using 4.66 GB | |
| Read 5100000 reads. Hash load: 156329408 / 1073741824 = 0.146 using 4.72 GB | |
| Read 5200000 reads. Hash load: 159060550 / 1073741824 = 0.148 using 4.78 GB | |
| Read 5000000 reads. Hash load: 153597524 / 1073741824 = 0.143 using 4.66 GB | |
| Read 5100000 reads. Hash load: 156329408 / 1073741824 = 0.146 using 4.72 GB | |
| Read 5000000 reads. Hash load: 153597524 / 1073741824 = 0.143 using 4.66 GB | |
| Read 5100000 reads. Hash load: 156329408 / 1073741824 = 0.146 using 4.72 GB | |
| Read 5200000 reads. Hash load: 159060550 / 1073741824 = 0.148 using 4.78 GB | |
| Read 5000000 reads. Hash load: 153597524 / 1073741824 = 0.143 using 4.66 GB | |
| Read 5100000 reads. Hash load: 156329408 / 1073741824 = 0.146 using 4.72 GB | |
| -------------------------------------------------------------------------- | |
| mpirun detected that one or more processes exited with non-zero status, thus causing | |
| the job to be terminated. The first process to do so was: | |
| Process name: [[25065,1],5] | |
| Exit code: 2 | |
| -------------------------------------------------------------------------- |
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