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May 8, 2014 19:54
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| spenser@scotch:src$ mpirun -np 2 valgrind ./transpose2 8 | |
| ==31275== Memcheck, a memory error detector | |
| ==31275== Copyright (C) 2002-2012, and GNU GPL'd, by Julian Seward et al. | |
| ==31275== Using Valgrind-3.8.1 and LibVEX; rerun with -h for copyright info | |
| ==31275== Command: ./transpose2 8 | |
| ==31275== | |
| ==31276== Memcheck, a memory error detector | |
| ==31276== Copyright (C) 2002-2012, and GNU GPL'd, by Julian Seward et al. | |
| ==31276== Using Valgrind-3.8.1 and LibVEX; rerun with -h for copyright info | |
| ==31276== Command: ./transpose2 8 | |
| ==31276== | |
| ==31275== Syscall param writev(vector[...]) points to uninitialised byte(s) | |
| ==31275== at 0x34414E0C1B: writev (in /lib64/libc-2.12.so) | |
| ==31275== by 0x6066D66: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_oob_tcp.so) | |
| ==31275== by 0x606833C: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_oob_tcp.so) | |
| ==31275== by 0x606A94C: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_oob_tcp.so) | |
| ==31275== by 0x5E5E3D5: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_rml_oob.so) | |
| ==31275== by 0x5E5E61F: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_rml_oob.so) | |
| ==31275== by 0x6475E97: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_grpcomm_bad.so) | |
| ==31275== by 0x344244BB69: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31275== by 0x3442463C6F: PMPI_Init (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31275== by 0x401147: main (transpose2.c:82) | |
| ==31275== Address 0x4fd40e1 is 161 bytes inside a block of size 256 alloc'd | |
| ==31275== at 0x4A06BE0: realloc (vg_replace_malloc.c:662) | |
| ==31275== by 0x34424D3562: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31275== by 0x34424D3FD4: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31275== by 0x34424AF2D6: orte_grpcomm_base_pack_modex_entries (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31275== by 0x6475E4C: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_grpcomm_bad.so) | |
| ==31275== by 0x344244BB69: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31275== by 0x3442463C6F: PMPI_Init (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31275== by 0x401147: main (transpose2.c:82) | |
| ==31275== | |
| ==31276== Syscall param writev(vector[...]) points to uninitialised byte(s) | |
| ==31276== at 0x34414E0C1B: writev (in /lib64/libc-2.12.so) | |
| ==31276== by 0x6066D66: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_oob_tcp.so) | |
| ==31276== by 0x606833C: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_oob_tcp.so) | |
| ==31276== by 0x606A94C: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_oob_tcp.so) | |
| ==31276== by 0x5E5E3D5: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_rml_oob.so) | |
| ==31276== by 0x5E5E61F: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_rml_oob.so) | |
| ==31276== by 0x6475E97: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_grpcomm_bad.so) | |
| ==31276== by 0x344244BB69: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x3442463C6F: PMPI_Init (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x401147: main (transpose2.c:82) | |
| ==31276== Address 0x4fd3cc1 is 161 bytes inside a block of size 256 alloc'd | |
| ==31276== at 0x4A06BE0: realloc (vg_replace_malloc.c:662) | |
| ==31276== by 0x34424D3562: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x34424D3FD4: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x34424AF2D6: orte_grpcomm_base_pack_modex_entries (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x6475E4C: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_grpcomm_bad.so) | |
| ==31276== by 0x344244BB69: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x3442463C6F: PMPI_Init (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x401147: main (transpose2.c:82) | |
| ==31276== | |
| N = 8 | |
| Matrix = | |
| 0: 0 1 2 3 4 5 6 7 | |
| 0: 8 9 10 11 12 13 14 15 | |
| 0: 16 17 18 19 20 21 22 23 | |
| 0: 24 25 26 27 28 29 30 31 | |
| 1: 32 33 34 35 36 37 38 39 | |
| 1: 40 41 42 43 44 45 46 47 | |
| 1: 48 49 50 51 52 53 54 55 | |
| 1: 56 57 58 59 60 61 62 63 | |
| DOING TRANSPOSE | |
| DOING TRANSPOSE | |
| ==31276== Invalid read of size 2 | |
| ==31276== at 0x4A08D6C: memcpy (mc_replace_strmem.c:882) | |
| ==31276== by 0x34424DD616: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x8D4723C: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_btl_sm.so) | |
| ==31276== by 0x7CDD813: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_pml_ob1.so) | |
| ==31276== by 0x7CD41BF: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_pml_ob1.so) | |
| ==31276== by 0x9BEDB22: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_coll_tuned.so) | |
| ==31276== by 0x9BF2C18: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_coll_tuned.so) | |
| ==31276== by 0x344245752C: PMPI_Alltoall (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x401100: mpi_transpose (transpose2.c:68) | |
| ==31276== by 0x40130D: main (transpose2.c:118) | |
| ==31276== Address 0x840201e is 14 bytes after a block of size 256 alloc'd | |
| ==31276== at 0x4A069EE: malloc (vg_replace_malloc.c:270) | |
| ==31276== by 0x400F0F: mpi_transpose (transpose2.c:40) | |
| ==31276== by 0x40130D: main (transpose2.c:118) | |
| ==31276== | |
| ==31276== Invalid write of size 2 | |
| ==31276== at 0x4A08C4C: memcpy (mc_replace_strmem.c:882) | |
| ==31276== by 0x34424DE9EE: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x7CD5F1A: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_pml_ob1.so) | |
| ==31276== by 0x8D4842C: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_btl_sm.so) | |
| ==31276== by 0x34424D1AC9: opal_progress (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x344244A9F4: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x9BEDB3D: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_coll_tuned.so) | |
| ==31276== by 0x9BF2C18: ??? (in /usr/lib64/openmpi/lib/openmpi/mca_coll_tuned.so) | |
| ==31276== by 0x344245752C: PMPI_Alltoall (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x401100: mpi_transpose (transpose2.c:68) | |
| ==31276== by 0x40130D: main (transpose2.c:118) | |
| ==31276== Address 0x4fed5a0 is 0 bytes after a block of size 256 alloc'd | |
| ==31276== at 0x4A069EE: malloc (vg_replace_malloc.c:270) | |
| ==31276== by 0x401212: main (transpose2.c:97) | |
| ==31276== | |
| ==31276== Invalid read of size 8 | |
| ==31276== at 0x4A08BE8: memcpy (mc_replace_strmem.c:882) | |
| ==31276== by 0x34424DB707: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x344245528E: ompi_datatype_sndrcv (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x344245752C: PMPI_Alltoall (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x401100: mpi_transpose (transpose2.c:68) | |
| ==31276== by 0x40130D: main (transpose2.c:118) | |
| ==31276== Address 0x8402020 is 16 bytes after a block of size 256 alloc'd | |
| ==31276== at 0x4A069EE: malloc (vg_replace_malloc.c:270) | |
| ==31276== by 0x400F0F: mpi_transpose (transpose2.c:40) | |
| ==31276== by 0x40130D: main (transpose2.c:118) | |
| ==31276== | |
| ==31276== Invalid write of size 8 | |
| ==31276== at 0x4A08BF3: memcpy (mc_replace_strmem.c:882) | |
| ==31276== by 0x34424DB707: ??? (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x344245528E: ompi_datatype_sndrcv (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x344245752C: PMPI_Alltoall (in /usr/lib64/openmpi/lib/libmpi.so.1.0.2) | |
| ==31276== by 0x401100: mpi_transpose (transpose2.c:68) | |
| ==31276== by 0x40130D: main (transpose2.c:118) | |
| ==31276== Address 0x4fed5b0 is 16 bytes after a block of size 256 alloc'd | |
| ==31276== at 0x4A069EE: malloc (vg_replace_malloc.c:270) | |
| ==31276== by 0x401212: main (transpose2.c:97) | |
| ==31276== | |
| Matrix = | |
| 0: 0 8 16 24 32 40 48 56 | |
| 0: 1 9 17 25 33 41 49 57 | |
| 0: 2 10 18 26 34 42 50 58 | |
| 0: 3 11 19 27 35 43 51 59 | |
| 1: 4 12 20 28 36 44 52 60 | |
| 1: 5 13 21 29 37 45 53 61 | |
| 1: 6 14 22 30 38 46 54 62 | |
| 1: 7 15 23 31 39 47 55 63 | |
| ==31276== | |
| ==31276== HEAP SUMMARY: | |
| ==31276== in use at exit: 159,364 bytes in 171 blocks | |
| ==31276== total heap usage: 6,757 allocs, 6,586 frees, 13,173,643 bytes allocated | |
| ==31276== | |
| ==31276== LEAK SUMMARY: | |
| ==31276== definitely lost: 51,469 bytes in 68 blocks | |
| ==31276== indirectly lost: 15,066 bytes in 40 blocks | |
| ==31276== possibly lost: 0 bytes in 0 blocks | |
| ==31276== still reachable: 92,829 bytes in 63 blocks | |
| ==31276== suppressed: 0 bytes in 0 blocks | |
| ==31276== Rerun with --leak-check=full to see details of leaked memory | |
| ==31276== | |
| ==31276== For counts of detected and suppressed errors, rerun with: -v | |
| ==31276== Use --track-origins=yes to see where uninitialised values come from | |
| ==31276== ERROR SUMMARY: 82 errors from 5 contexts (suppressed: 6 from 6) | |
| -------------------------------------------------------------------------- | |
| mpirun noticed that process rank 1 with PID 31276 on node scotch.ecasp.org exited on signal 27 (Profiling timer expired). | |
| -------------------------------------------------------------------------- |
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