output 1 and 2

$ java -jar /usr/local/HermiT/HermiT.jar --classify test-complet.ttl
Exception in thread "main" org.semanticweb.owlapi.reasoner.InconsistentOntologyException: Inconsistent ontology
	at org.semanticweb.HermiT.Reasoner.throwInconsistentOntologyExceptionIfNecessary(Unknown Source)
	at org.semanticweb.HermiT.Reasoner.checkPreConditions(Unknown Source)
	at org.semanticweb.HermiT.Reasoner.precomputeInferences(Unknown Source)
	at org.semanticweb.HermiT.cli.CommandLine$ClassifyAction.run(Unknown Source)
	at org.semanticweb.HermiT.cli.CommandLine.main(Unknown Source)

output 3

$ java -jar /usr/local/HermiT/HermiT.jar --classify test-complet.rdf
SubClassOf( <https://w3id.org/own-pt/wn30/schema/AdjectiveSynset> <https://w3id.org/own-pt/wn30/schema/Synset> )
SubClassOf( <https://w3id.org/own-pt/wn30/schema/NounSynset> <https://w3id.org/own-pt/wn30/schema/Synset> )
SubClassOf( <https://w3id.org/own-pt/wn30/schema/AdverbSynset> <https://w3id.org/own-pt/wn30/schema/Synset> )
SubClassOf( <https://w3id.org/own-pt/wn30/schema/VerbSynset> <https://w3id.org/own-pt/wn30/schema/Synset> )
SubClassOf( <https://w3id.org/own-pt/wn30/schema/AdjectiveSatelliteSynset> <https://w3id.org/own-pt/wn30/schema/AdjectiveSynset> )
SubClassOf( <https://w3id.org/own-pt/wn30/schema/AdverbWordSense> <https://w3id.org/own-pt/wn30/schema/WordSense> )
SubClassOf( <https://w3id.org/own-pt/wn30/schema/NounWordSense> <https://w3id.org/own-pt/wn30/schema/WordSense> )
SubClassOf( <https://w3id.org/own-pt/wn30/schema/AdjectiveWordSense> <https://w3id.org/own-pt/wn30/schema/WordSense> )
SubClassOf( <https://w3id.org/own-pt/wn30/schema/VerbWordSense> <https://w3id.org/own-pt/wn30/schema/WordSense> )
SubClassOf( <https://w3id.org/own-pt/wn30/schema/AdjectiveSatelliteWordSense> <https://w3id.org/own-pt/wn30/schema/AdjectiveWordSense> )

playing with hermit

;; rdfpro does not parse/write ttl files right
$ rapper -i turtle -o rdfxml wn30.ttl > wn30.rdf ; rapper -i turtle -o rdfxml test.ttl > test.rdf; rdfpro @r wn30.rdf test.rdf @w test-complet.rdf
rapper: Parsing URI file:///Users/arademaker/work/openWordnet-PT/wn30.ttl with parser turtle
rapper: Serializing with serializer rdfxml
rapper: Parsing returned 570 triples
rapper: Parsing URI file:///Users/arademaker/work/openWordnet-PT/test.ttl with parser turtle
rapper: Serializing with serializer rdfxml
rapper: Parsing returned 6 triples
01:03:26(I) 576 triples read (48000 tr/s avg)
01:03:26(I) 576 triples written (48000 tr/s avg)
01:03:26(I) Done in 0 s

$ java -jar /usr/local/HermiT/HermiT.jar -k test-complet.ttl
$ java -jar /usr/local/HermiT/HermiT.jar -c test-complet.ttl
$ java -jar /usr/local/HermiT/HermiT.jar --consistency=wn30:Word test-complet.ttl

test1.ttl

@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix wn30: <https://w3id.org/own-pt/wn30/schema/> .
@prefix nomlex: <https://w3id.org/own-pt/nomlex/schema/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix : <http://w3id.org/own-pt/example/> .

:ws a wn30:WordSense ;
   wn30:word :w1 ;
   wn30:word :w2 .

:w1 a wn30:Word .
:w2 a wn30:Word .

:w1 wn30:lexicalForm "w1 form" ;
    wn30:lexicalForm "w2 form" .

test2.ttl

@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix wn30: <https://w3id.org/own-pt/wn30/schema/> .
@prefix nomlex: <https://w3id.org/own-pt/nomlex/schema/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix : <http://w3id.org/own-pt/example/> .

:ws a wn30:WordSense ;
   wn30:word :w1 ;
   wn30:word :w2 .

:w1 a wn30:Word .
:w2 a wn30:Word .

:w1 owl:differentFrom :w2 .

:w1 wn30:lexicalForm "w1 form" ;
    wn30:lexicalForm "w2 form" .

test3.ttl

@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix wn30: <https://w3id.org/own-pt/wn30/schema/> .
@prefix nomlex: <https://w3id.org/own-pt/nomlex/schema/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix : <http://w3id.org/own-pt/example/> .

:ws a wn30:WordSense ;
   wn30:word :w1 ;
   wn30:word :w2 .

:w1 a wn30:Word .
:w2 a wn30:Word .

:w1 wn30:lexicalForm "w1 form"^^xsd:string .

I didn't find explanation for the fail of Hermit in any documentation, but I finnaly managed to make Hermit reject the test1.ttl by simply removing the axiom below from the ontology.

wn30:lexicalForm rdfs:subPropertyOf rdfs:label .