Created
December 4, 2014 23:42
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attributes: | |
name: cpg | |
version: 0.1 | |
recipe: | |
full: | |
recipe_type: bash | |
recipe_cmds: | |
- > | |
mysql --user=genome --host=genome-mysql.cse.ucsc.edu \ | |
-A -N -B -D hg19 \ | |
-e "SELECT chrom, chromStart, chromEnd, perGc, name from cpgIslandExt" \ | |
| awk '{print $0"\thi"}' | |
recipe_outfiles: | |
- ucsc.human.b37.cpg |
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Very much bike-shed painting comments, but perhaps change
recipe_type
->type
b/crecipe
is redundantrecipe_cmds
->commands
b/c ditto and real word better than abbreviationrecipe_outfiles
->output
b/c ditto