maven exec file copying helper

copyToFiji.sh

#!/bin/bash

#Replace USERNAME1 etc with your user names on all computers
#in order to find the Fiji.app (or replace with Fiji app locations)
usernames= ( USERNAME1 USERNAME2 )

FIJIPATH=/Applications/Fiji.app

for i in ${usernames[@]}
do
	[ -d "$FIJIPATH" ] && break
	FIJIPATH=/Users/$i/Applications/Fiji.app
	[ -d "$FIJIPATH" ] && break
	FIJIPATH=/home/$i/Fiji.app
	[ -d "$FIJIPATH" ] && break
	FIJIPATH=/c/Users/$i/Documents/Fiji.app
	[ -d "$FIJIPATH" ] && break
	FIJIPATH=/mnt/c/Users/$i/Documents/Fiji.app
done

[ ! -d "$FIJIPATH" ] && echo -e "Could not find Fiji.app" && exit 1

echo -e "Fiji.app found at $FIJIPATH"

[[ "$1" == *copyToFiji.bat ]] && shift

if [ "$1" == "" ]
 then
	echo "Usage:"
	echo "		$0 jars|plugins|ijfolder jarname targetFile"
	echo "example: 	copyToFiji.sh jars ij imagejA/target/ij-1.52e.jar"
	exit 0
fi

tpath=${3/C:/\/c}
tpath=${tpath//\\/\/}

[ ! -f "$tpath" ] && tpath=/mnt$tpath
[ ! -f "$tpath" ] && echo "Cannot find target $tpath" && exit 1

echo "copyToFiji running finding paths..."
echo "arg1: $1"
echo "arg2: $2"
echo "arg3: $tpath"
jarpath=`ls $FIJIPATH/$1/$2-*.jar | head -n 1`
#tpath=`ls $3/*.jar | grep -v sources | grep -v tests | tail -n 1`

if [ "$3" == "" ] || [ "$jarpath" == "" ]
 then
	echo "Could not find $2-xx.jar to remove, copying anyway though"
else
	echo rm "$jarpath"
	rm "$jarpath"
fi

echo cp -f "$tpath" "$FIJIPATH/$1/"
cp -f "$tpath" "$FIJIPATH/$1/"