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December 7, 2015 12:12
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fail to import MDAnalysis
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| Failure: ImportError (dynamic module does not define init function (init_distances)) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| Failure: ImportError (cannot import name log) ... ERROR | |
| MDAnalysisTests.test_meta.test_import ... FAIL | |
| MDAnalysisTests.test_meta.test_matching_versions ... ERROR | |
| MDAnalysisTests.test_meta.test_version_format ... ERROR | |
| MDAnalysisTests.test_meta.test_version_at_packagelevel ... ERROR | |
| test_KDTree (MDAnalysisTests.test_deprecated.TestImports) ... FAIL | |
| test_core_distances (MDAnalysisTests.test_deprecated.TestImports) ... FAIL | |
| test_core_log (MDAnalysisTests.test_deprecated.TestImports) ... FAIL | |
| test_core_qcprot (MDAnalysisTests.test_deprecated.TestImports) ... FAIL | |
| test_core_transformations (MDAnalysisTests.test_deprecated.TestImports) ... FAIL | |
| test_core_units (MDAnalysisTests.test_deprecated.TestImports) ... FAIL | |
| test_core_util (MDAnalysisTests.test_deprecated.TestImports) ... FAIL | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_atomgroup.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_velocities_forces.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_selections.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_meta.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_modelling.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_imports.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./datafiles.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_topology.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_deprecated.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_qcprot.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_util.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_lammpsdata.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_nuclinfo.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_persistence.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_altloc.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_streamio.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_tprparser.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_units.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_log.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_distances.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_atomselections.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_libxdrfile2.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./test_transformations.py',) ... ok | |
| MDAnalysisTests.test_imports.TestRelativeImports.test_relative_imports('./__init__.py',) ... ok | |
| ====================================================================== | |
| ERROR: Failure: ImportError (dynamic module does not define init function (init_distances)) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/analysis/test_align.py", line 18, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 30, in <module> | |
| from . import distances # distances relies on mdamath | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/distances.py", line 68, in <module> | |
| package="MDAnalysis.lib") | |
| File "/usr/remote/python/2.7.8/lib/python2.7/importlib/__init__.py", line 37, in import_module | |
| __import__(name) | |
| ImportError: dynamic module does not define init function (init_distances) | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/analysis/test_distances.py", line 18, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/analysis/test_hbonds.py", line 18, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/analysis/test_helanal.py", line 18, in <module> | |
| import MDAnalysis.analysis.helanal | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/analysis/test_hole.py", line 18, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/analysis/test_leaflet.py", line 16, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/analysis/test_pca.py", line 3, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/analysis/test_psa.py", line 18, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/analysis/test_rms.py", line 18, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/analysis/test_waterdynamics.py", line 17, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_coordinates.py", line 17, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_dcd.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_dlpoly.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_dms.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_gms.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_gro.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_lammps.py", line 4, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_mol2.py", line 21, in <module> | |
| from MDAnalysis import Universe | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_netcdf.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_pdb.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_pdbqt.py", line 17, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_pqr.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_reader_api.py", line 17, in <module> | |
| from MDAnalysis.coordinates.base import Timestep, SingleFrameReader, Reader | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_timestep_api.py", line 31, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_trj.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_trz.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_xdr.py", line 2, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/coordinates/test_xyz.py", line 1, in <module> | |
| import MDAnalysis as mda | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_altloc.py", line 16, in <module> | |
| from MDAnalysis import Universe | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_atomgroup.py", line 17, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_atomselections.py", line 30, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_distances.py", line 16, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_lammpsdata.py", line 21, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_libxdrfile2.py", line 19, in <module> | |
| from MDAnalysis.tests.datafiles import XTC, TRR | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_log.py", line 29, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_modelling.py", line 17, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_nuclinfo.py", line 27, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_persistence.py", line 17, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_qcprot.py", line 35, in <module> | |
| import MDAnalysis.lib.qcprot as qcp | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_selections.py", line 28, in <module> | |
| from MDAnalysis.lib.util import NamedStream | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_streamio.py", line 19, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_topology.py", line 16, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_tprparser.py", line 16, in <module> | |
| from MDAnalysis.tests.datafiles import TPR, \ | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_transformations.py", line 22, in <module> | |
| from MDAnalysis.lib import transformations as t | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_units.py", line 21, in <module> | |
| from MDAnalysis import units | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_util.py", line 23, in <module> | |
| import MDAnalysis.lib.util as util | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: Failure: ImportError (cannot import name log) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/loader.py", line 418, in loadTestsFromName | |
| addr.filename, addr.module) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 47, in importFromPath | |
| return self.importFromDir(dir_path, fqname) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/importer.py", line 94, in importFromDir | |
| mod = load_module(part_fqname, fh, filename, desc) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_velocities_forces.py", line 17, in <module> | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: MDAnalysisTests.test_meta.test_matching_versions | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/case.py", line 197, in runTest | |
| self.test(*self.arg) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_meta.py", line 33, in test_matching_versions | |
| import MDAnalysis.version | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: MDAnalysisTests.test_meta.test_version_format | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/case.py", line 197, in runTest | |
| self.test(*self.arg) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_meta.py", line 41, in test_version_format | |
| import MDAnalysis.version | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| ERROR: MDAnalysisTests.test_meta.test_version_at_packagelevel | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/case.py", line 197, in runTest | |
| self.test(*self.arg) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_meta.py", line 50, in test_version_at_packagelevel | |
| import MDAnalysis | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/__init__.py", line 151, in <module> | |
| from .lib import log | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysis-0.13.0_dev0-py2.7-linux-x86_64.egg/MDAnalysis/lib/__init__.py", line 26, in <module> | |
| from . import log | |
| ImportError: cannot import name log | |
| ====================================================================== | |
| FAIL: MDAnalysisTests.test_meta.test_import | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/nose/case.py", line 197, in runTest | |
| self.test(*self.arg) | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_meta.py", line 28, in test_import | |
| raise AssertionError('Failed to import module MDAnalysis. Install MDAnalysis' | |
| AssertionError: Failed to import module MDAnalysis. Install MDAnalysisfirst to run the tests, e.g. "pip install mdanalysis" | |
| ====================================================================== | |
| FAIL: test_KDTree (MDAnalysisTests.test_deprecated.TestImports) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_deprecated.py", line 64, in test_KDTree | |
| raise AssertionError("MDAnalysis.KDTree not available") | |
| AssertionError: MDAnalysis.KDTree not available | |
| ====================================================================== | |
| FAIL: test_core_distances (MDAnalysisTests.test_deprecated.TestImports) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_deprecated.py", line 46, in test_core_distances | |
| raise AssertionError("MDAnalysis.core.distances not available") | |
| AssertionError: MDAnalysis.core.distances not available | |
| ====================================================================== | |
| FAIL: test_core_log (MDAnalysisTests.test_deprecated.TestImports) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_deprecated.py", line 40, in test_core_log | |
| raise AssertionError("MDAnalysis.core.log not available") | |
| AssertionError: MDAnalysis.core.log not available | |
| ====================================================================== | |
| FAIL: test_core_qcprot (MDAnalysisTests.test_deprecated.TestImports) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_deprecated.py", line 58, in test_core_qcprot | |
| raise AssertionError("MDAnalysis.core.qcprot not available") | |
| AssertionError: MDAnalysis.core.qcprot not available | |
| ====================================================================== | |
| FAIL: test_core_transformations (MDAnalysisTests.test_deprecated.TestImports) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_deprecated.py", line 52, in test_core_transformations | |
| raise AssertionError("MDAnalysis.core.transformations not available") | |
| AssertionError: MDAnalysis.core.transformations not available | |
| ====================================================================== | |
| FAIL: test_core_units (MDAnalysisTests.test_deprecated.TestImports) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_deprecated.py", line 28, in test_core_units | |
| raise AssertionError("MDAnalysis.core.units not available") | |
| AssertionError: MDAnalysis.core.units not available | |
| ====================================================================== | |
| FAIL: test_core_util (MDAnalysisTests.test_deprecated.TestImports) | |
| ---------------------------------------------------------------------- | |
| Traceback (most recent call last): | |
| File "/users/ardita/MDAPCAvenv/lib/python2.7/site-packages/MDAnalysisTests-0.13.0_dev0-py2.7.egg/MDAnalysisTests/test_deprecated.py", line 34, in test_core_util | |
| raise AssertionError("MDAnalysis.core.util not available") | |
| AssertionError: MDAnalysis.core.util not available | |
| ---------------------------------------------------------------------- | |
| Ran 82 tests in 1.019s | |
| FAILED (errors=50, failures=8) |
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