Created
July 19, 2022 08:37
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get alleles from multiple sequence alignment
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msa: | |
>COL1A1_longi | |
xFSAxxxxxxxxxxxxxxxxxxxxxxG | |
>COL1A1_African64.aa:_4 | |
MFSFVDLRLLLLLAATALLTHGQEEG- | |
shell_code: | |
conda install -c bioconda snp-sites | |
snp-sites -rv -o t.vcf t.fa |
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