Split By Barcode
Austin G. Davis-Richardson
dr = in splitbybarcode.py to the BaseCalls directory for your Illumina run.
Script assumes barcodes are in the reverse-complement orientation.
Split reads are stored in the folder
out/ which you have to create yourself.
config.yaml stores information about the barcodes in this format:
1: #lane 1: AAGGTGG # barcode number: barcode sequence 2: GGCCAAG .... ....