Created
May 23, 2024 11:10
-
-
Save bedroge/ef90b58bd186545514399fb245493512 to your computer and use it in GitHub Desktop.
(partial) EasyBuild log for failed build of /nvme/eb/tmp/eb-kb245wm1/files_pr20581/h/hwloc/hwloc-2.10.0-GCCcore-13.3.0.eb (PR(s) #20581)
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
== 2024-05-23 11:09:54,103 easyblock.py:313 INFO This is EasyBuild 4.9.1 (framework: 4.9.1, easyblocks: 4.9.1) on host starfive. | |
== 2024-05-23 11:09:54,104 easyblock.py:319 INFO This is easyblock ConfigureMake from module easybuild.easyblocks.generic.configuremake (/nvme/easybuild-generic/software/EasyBuild/4.9.1/lib/python3.10/site-packages/easybuild/easyblocks/generic/configuremake.py) | |
== 2024-05-23 11:09:54,105 easyblock.py:1056 INFO Build dir set to /nvme/eb/build/hwloc/2.10.0/GCCcore-13.3.0 | |
== 2024-05-23 11:09:54,106 easyblock.py:1113 INFO Software install dir set to /nvme/easybuild-generic/software/hwloc/2.10.0-GCCcore-13.3.0 | |
== 2024-05-23 11:09:54,107 easyblock.py:1118 INFO Module install dir set to /nvme/easybuild-generic/modules/all | |
== 2024-05-23 11:09:54,107 easyblock.py:288 INFO Init completed for application name hwloc version 2.10.0 | |
== 2024-05-23 11:09:54,108 easyblock.py:4234 INFO Obtained application instance of for hwloc (easyblock: ConfigureMake) | |
== 2024-05-23 11:09:54,109 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-23 11:09:54,111 easyconfig.py:1721 INFO Template values: arch='riscv64', bitbucket_account='hwloc', github_account='hwloc', module_name='hwloc/2.10.0-GCCcore-13.3.0', name='hwloc', nameletter='h', nameletterlower='h', namelower='hwloc', sysroot='', toolchain_name='GCCcore', toolchain_version='13.3.0', version='2.10.0', version_major='2', version_major_minor='2.10', version_minor='10', versionprefix='', versionsuffix='' | |
== 2024-05-23 11:09:54,114 one.py:180 INFO Skipping reformatting value for parameter 'toolchain' | |
== 2024-05-23 11:09:54,119 filetools.py:1912 INFO Creating directory /nvme/eb/tmp/eb-kb245wm1/reprod_20240523110954_2640115 (parents: True, set_gid: False, sticky: False) | |
== 2024-05-23 11:09:54,120 easyblock.py:4488 INFO Dumped easyconfig instance to /nvme/eb/tmp/eb-kb245wm1/reprod_20240523110954_2640115/hwloc-2.10.0-GCCcore-13.3.0.eb | |
== 2024-05-23 11:09:54,121 filetools.py:1912 INFO Creating directory /nvme/eb/tmp/eb-kb245wm1/reprod_20240523110954_2640115/easyblocks (parents: True, set_gid: False, sticky: False) | |
== 2024-05-23 11:09:54,122 filetools.py:2425 INFO /nvme/easybuild-generic/software/EasyBuild/4.9.1/lib/python3.10/site-packages/easybuild/easyblocks/generic/configuremake.py copied to /nvme/eb/tmp/eb-kb245wm1/reprod_20240523110954_2640115/easyblocks/configuremake.py | |
== 2024-05-23 11:09:54,123 easyblock.py:4468 INFO Dumped easyblock configuremake.py required for reproduction to /nvme/eb/tmp/eb-kb245wm1/reprod_20240523110954_2640115/easyblocks | |
== 2024-05-23 11:09:54,124 easyblock.py:2239 INFO Number of iterations to perform for central part of installation procedure: 1 | |
== 2024-05-23 11:09:54,125 build_log.py:267 INFO building and installing hwloc/2.10.0-GCCcore-13.3.0... | |
== 2024-05-23 11:09:54,126 filetools.py:2005 INFO Lock /nvme/easybuild-generic/software/.locks/_nvme_easybuild-generic_software_hwloc_2.10.0-GCCcore-13.3.0.lock does not exist | |
== 2024-05-23 11:09:54,127 filetools.py:1946 INFO Creating lock at /nvme/easybuild-generic/software/.locks/_nvme_easybuild-generic_software_hwloc_2.10.0-GCCcore-13.3.0.lock... | |
== 2024-05-23 11:09:54,127 filetools.py:1912 INFO Creating directory /nvme/easybuild-generic/software/.locks/_nvme_easybuild-generic_software_hwloc_2.10.0-GCCcore-13.3.0.lock (parents: True, set_gid: False, sticky: False) | |
== 2024-05-23 11:09:54,128 filetools.py:1955 INFO Lock created: /nvme/easybuild-generic/software/.locks/_nvme_easybuild-generic_software_hwloc_2.10.0-GCCcore-13.3.0.lock | |
== 2024-05-23 11:09:54,129 build_log.py:267 INFO fetching files... | |
== 2024-05-23 11:09:54,130 easyblock.py:3956 INFO Starting fetch step | |
== 2024-05-23 11:09:54,131 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-23 11:09:54,132 easyconfig.py:1721 INFO Template values: arch='riscv64', bitbucket_account='hwloc', builddir='/nvme/eb/build/hwloc/2.10.0/GCCcore-13.3.0', github_account='hwloc', installdir='/nvme/easybuild-generic/software/hwloc/2.10.0-GCCcore-13.3.0', module_name='hwloc/2.10.0-GCCcore-13.3.0', name='hwloc', nameletter='h', nameletterlower='h', namelower='hwloc', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='13.3.0', version='2.10.0', version_major='2', version_major_minor='2.10', version_minor='10', versionprefix='', versionsuffix='' | |
== 2024-05-23 11:09:54,133 easyblock.py:3964 INFO Running method fetch_step part of step fetch | |
== 2024-05-23 11:09:54,134 easyblock.py:2361 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
== 2024-05-23 11:09:54,135 easyblock.py:809 INFO Considering directory in which easyconfig file is located when searching for hwloc-2.10.0.tar.gz: /nvme/eb/tmp/eb-kb245wm1/files_pr20581/h/hwloc | |
== 2024-05-23 11:09:54,135 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /nvme/easybuild-generic/software/EasyBuild/4.9.1/bin/eb | |
== 2024-05-23 11:09:54,136 tools.py:288 INFO Also considering installation prefix /nvme/easybuild-generic/software/EasyBuild/4.9.1 (determined via path to 'eb' script)... | |
== 2024-05-23 11:09:54,140 filetools.py:1912 INFO Creating directory /nvme/eb/src/h/hwloc (parents: True, set_gid: False, sticky: False) | |
== 2024-05-23 11:09:55,239 filetools.py:816 INFO File size for https://www.open-mpi.org/software/hwloc/v2.10/downloads/hwloc-2.10.0.tar.gz: 6065893 | |
== 2024-05-23 11:09:55,242 filetools.py:270 INFO Not showing progress bar for downloading small file (size 6065893) | |
== 2024-05-23 11:09:56,411 filetools.py:823 INFO Downloaded file hwloc-2.10.0.tar.gz from url https://www.open-mpi.org/software/hwloc/v2.10/downloads/hwloc-2.10.0.tar.gz to /nvme/eb/src/h/hwloc/hwloc-2.10.0.tar.gz | |
== 2024-05-23 11:09:56,413 filetools.py:855 INFO Successful download of file hwloc-2.10.0.tar.gz from url https://www.open-mpi.org/software/hwloc/v2.10/downloads/hwloc-2.10.0.tar.gz to path /nvme/eb/src/h/hwloc/hwloc-2.10.0.tar.gz | |
== 2024-05-23 11:09:56,414 easyblock.py:951 INFO Successfully downloaded source file hwloc-2.10.0.tar.gz from https://www.open-mpi.org/software/hwloc/v2.10/downloads/hwloc-2.10.0.tar.gz | |
== 2024-05-23 11:09:56,414 easyblock.py:496 INFO Added sources: [{'name': 'hwloc-2.10.0.tar.gz', 'path': '/nvme/eb/src/h/hwloc/hwloc-2.10.0.tar.gz', 'cmd': None, 'checksum': 'c7fd8a1404a9719c76aadc642864b9f77aed1dc1fc8882d6af861a9260ba240d', 'finalpath': '/nvme/eb/build/hwloc/2.10.0/GCCcore-13.3.0'}] | |
== 2024-05-23 11:09:56,415 easyblock.py:2404 INFO no patches provided | |
== 2024-05-23 11:09:56,462 easyblock.py:2414 INFO md5 checksum for /nvme/eb/src/h/hwloc/hwloc-2.10.0.tar.gz: bf8188ab705b248bdcc5dfdae2d95065 | |
== 2024-05-23 11:09:56,642 easyblock.py:2414 INFO sha256 checksum for /nvme/eb/src/h/hwloc/hwloc-2.10.0.tar.gz: c7fd8a1404a9719c76aadc642864b9f77aed1dc1fc8882d6af861a9260ba240d | |
== 2024-05-23 11:09:56,644 easyblock.py:2449 INFO Checking dirs that need to be created: ['/nvme/easybuild-generic/software/hwloc/2.10.0-GCCcore-13.3.0', '/nvme/easybuild-generic/modules/all/hwloc', '/nvme/easybuild-generic/modules/system/hwloc'] | |
== 2024-05-23 11:09:56,645 filetools.py:1912 INFO Creating directory /nvme/easybuild-generic/software/hwloc/2.10.0-GCCcore-13.3.0 (parents: True, set_gid: False, sticky: False) | |
== 2024-05-23 11:09:56,646 filetools.py:1912 INFO Creating directory /nvme/easybuild-generic/modules/all/hwloc (parents: True, set_gid: False, sticky: False) | |
== 2024-05-23 11:09:56,647 filetools.py:1912 INFO Creating directory /nvme/easybuild-generic/modules/system/hwloc (parents: True, set_gid: False, sticky: False) | |
== 2024-05-23 11:09:56,650 configuremake.py:95 INFO config.guess version: 2018-08-29 (last updated: 2024-05-22T21:08:32.731322, SHA256 checksum: c02eb9cc55c86cfd1e9a794e548d25db5c9539e7b2154beb649bc6e2cbffc74c) | |
== 2024-05-23 11:09:56,651 configuremake.py:151 INFO Found config.guess at /nvme/eb/src/generic/eb_v4.9.1/ConfigureMake/config.guess | |
== 2024-05-23 11:09:56,652 build_log.py:267 INFO ... (took 2 secs) | |
== 2024-05-23 11:09:56,653 build_log.py:267 INFO creating build dir, resetting environment... | |
== 2024-05-23 11:09:56,653 easyblock.py:3956 INFO Starting ready step | |
== 2024-05-23 11:09:56,654 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-23 11:09:56,656 easyconfig.py:1721 INFO Template values: arch='riscv64', bitbucket_account='hwloc', builddir='/nvme/eb/build/hwloc/2.10.0/GCCcore-13.3.0', github_account='hwloc', installdir='/nvme/easybuild-generic/software/hwloc/2.10.0-GCCcore-13.3.0', module_name='hwloc/2.10.0-GCCcore-13.3.0', name='hwloc', nameletter='h', nameletterlower='h', namelower='hwloc', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='13.3.0', version='2.10.0', version_major='2', version_major_minor='2.10', version_minor='10', versionprefix='', versionsuffix='' | |
== 2024-05-23 11:09:56,656 easyblock.py:3964 INFO Running method check_readiness_step part of step ready | |
== 2024-05-23 11:09:56,657 easyblock.py:2258 INFO Setting parallelism: 4 | |
== 2024-05-23 11:09:56,799 easyblock.py:2310 WARNING Loaded modules detected: ['EasyBuild/4.9.1'] | |
== 2024-05-23 11:09:56,800 easyblock.py:3964 INFO Running method make_builddir part of step ready | |
== 2024-05-23 11:09:56,801 filetools.py:1912 INFO Creating directory /nvme/eb/build/hwloc/2.10.0/GCCcore-13.3.0 (parents: True, set_gid: False, sticky: False) | |
== 2024-05-23 11:09:56,802 easyblock.py:3964 INFO Running method reset_env part of step ready | |
== 2024-05-23 11:09:56,804 easyblock.py:3964 INFO Running method handle_iterate_opts part of step ready | |
== 2024-05-23 11:09:56,805 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-23 11:09:56,806 easyconfig.py:1721 INFO Template values: arch='riscv64', bitbucket_account='hwloc', builddir='/nvme/eb/build/hwloc/2.10.0/GCCcore-13.3.0', github_account='hwloc', installdir='/nvme/easybuild-generic/software/hwloc/2.10.0-GCCcore-13.3.0', module_name='hwloc/2.10.0-GCCcore-13.3.0', name='hwloc', nameletter='h', nameletterlower='h', namelower='hwloc', parallel='4', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='13.3.0', version='2.10.0', version_major='2', version_major_minor='2.10', version_minor='10', versionprefix='', versionsuffix='' | |
== 2024-05-23 11:09:56,807 build_log.py:267 INFO unpacking... | |
== 2024-05-23 11:09:56,808 easyblock.py:3956 INFO Starting source step | |
== 2024-05-23 11:09:56,810 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-23 11:09:56,813 easyconfig.py:1721 INFO Template values: arch='riscv64', bitbucket_account='hwloc', builddir='/nvme/eb/build/hwloc/2.10.0/GCCcore-13.3.0', github_account='hwloc', installdir='/nvme/easybuild-generic/software/hwloc/2.10.0-GCCcore-13.3.0', module_name='hwloc/2.10.0-GCCcore-13.3.0', name='hwloc', nameletter='h', nameletterlower='h', namelower='hwloc', parallel='4', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='13.3.0', version='2.10.0', version_major='2', version_major_minor='2.10', version_minor='10', versionprefix='', versionsuffix='' | |
== 2024-05-23 11:09:56,814 easyblock.py:3964 INFO Running method checksum_step part of step source | |
== 2024-05-23 11:09:57,001 easyblock.py:2467 INFO Checksum verification for /nvme/eb/src/h/hwloc/hwloc-2.10.0.tar.gz using c7fd8a1404a9719c76aadc642864b9f77aed1dc1fc8882d6af861a9260ba240d passed. | |
== 2024-05-23 11:09:57,002 easyblock.py:3964 INFO Running method extract_step part of step source | |
== 2024-05-23 11:09:57,002 easyblock.py:2579 INFO Unpacking source hwloc-2.10.0.tar.gz | |
== 2024-05-23 11:09:57,003 run.py:247 INFO running cmd: tar xzf /nvme/eb/src/h/hwloc/hwloc-2.10.0.tar.gz | |
== 2024-05-23 11:09:57,426 build_log.py:267 INFO patching... | |
== 2024-05-23 11:09:57,427 easyblock.py:3956 INFO Starting patch step | |
== 2024-05-23 11:09:57,428 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-23 11:09:57,429 easyconfig.py:1721 INFO Template values: arch='riscv64', bitbucket_account='hwloc', builddir='/nvme/eb/build/hwloc/2.10.0/GCCcore-13.3.0', github_account='hwloc', installdir='/nvme/easybuild-generic/software/hwloc/2.10.0-GCCcore-13.3.0', module_name='hwloc/2.10.0-GCCcore-13.3.0', name='hwloc', nameletter='h', nameletterlower='h', namelower='hwloc', parallel='4', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='13.3.0', version='2.10.0', version_major='2', version_major_minor='2.10', version_minor='10', versionprefix='', versionsuffix='' | |
== 2024-05-23 11:09:57,430 easyblock.py:3964 INFO Running method patch_step part of step patch | |
== 2024-05-23 11:09:57,431 build_log.py:267 INFO preparing... | |
== 2024-05-23 11:09:57,432 easyblock.py:3956 INFO Starting prepare step | |
== 2024-05-23 11:09:57,432 easyconfig.py:1702 INFO Generating template values... | |
== 2024-05-23 11:09:57,434 easyconfig.py:1721 INFO Template values: arch='riscv64', bitbucket_account='hwloc', builddir='/nvme/eb/build/hwloc/2.10.0/GCCcore-13.3.0', github_account='hwloc', installdir='/nvme/easybuild-generic/software/hwloc/2.10.0-GCCcore-13.3.0', module_name='hwloc/2.10.0-GCCcore-13.3.0', name='hwloc', nameletter='h', nameletterlower='h', namelower='hwloc', parallel='4', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='13.3.0', version='2.10.0', version_major='2', version_major_minor='2.10', version_minor='10', versionprefix='', versionsuffix='' | |
== 2024-05-23 11:09:57,435 easyblock.py:3964 INFO Running method prepare_step part of step prepare | |
== 2024-05-23 11:09:57,436 modules.py:626 INFO Checking whether binutils/2.42-GCCcore-13.3.0 exists... | |
== 2024-05-23 11:09:57,437 modules.py:631 INFO Module binutils/2.42-GCCcore-13.3.0 exists (found in list of available modules) | |
== 2024-05-23 11:09:57,438 modules.py:654 INFO Result for existence check of binutils/2.42-GCCcore-13.3.0 module: True | |
== 2024-05-23 11:09:57,438 modules.py:626 INFO Checking whether numactl/2.0.18-GCCcore-13.3.0 exists... | |
== 2024-05-23 11:09:57,439 modules.py:631 INFO Module numactl/2.0.18-GCCcore-13.3.0 exists (found in list of available modules) | |
== 2024-05-23 11:09:57,440 modules.py:654 INFO Result for existence check of numactl/2.0.18-GCCcore-13.3.0 module: True | |
== 2024-05-23 11:09:57,440 modules.py:626 INFO Checking whether libxml2/2.12.7-GCCcore-13.3.0 exists... | |
== 2024-05-23 11:09:57,441 modules.py:631 INFO Module libxml2/2.12.7-GCCcore-13.3.0 exists (found in list of available modules) | |
== 2024-05-23 11:09:57,442 modules.py:654 INFO Result for existence check of libxml2/2.12.7-GCCcore-13.3.0 module: True | |
== 2024-05-23 11:09:57,442 modules.py:626 INFO Checking whether libpciaccess/0.18.1-GCCcore-13.3.0 exists... | |
== 2024-05-23 11:09:57,443 modules.py:633 INFO Module libpciaccess/0.18.1-GCCcore-13.3.0 not found in list of available modules, checking via 'module show'... | |
== 2024-05-23 11:09:57,630 modules.py:647 INFO Module libpciaccess/0.18.1-GCCcore-13.3.0 not found via module avail/show, checking whether it is a wrapper | |
== 2024-05-23 11:09:57,632 modules.py:654 INFO Result for existence check of libpciaccess/0.18.1-GCCcore-13.3.0 module: False | |
== 2024-05-23 11:09:57,637 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/base/exceptions.py:126 in __init__): Missing modules for dependencies (use --robot?): libpciaccess/0.18.1-GCCcore-13.3.0 (at easybuild/tools/toolchain/toolchain.py:563 in _check_dependencies) | |
== 2024-05-23 11:09:57,638 filetools.py:2013 INFO Removing lock /nvme/easybuild-generic/software/.locks/_nvme_easybuild-generic_software_hwloc_2.10.0-GCCcore-13.3.0.lock... | |
== 2024-05-23 11:09:57,639 filetools.py:383 INFO Path /nvme/easybuild-generic/software/.locks/_nvme_easybuild-generic_software_hwloc_2.10.0-GCCcore-13.3.0.lock successfully removed. | |
== 2024-05-23 11:09:57,639 filetools.py:2017 INFO Lock removed: /nvme/easybuild-generic/software/.locks/_nvme_easybuild-generic_software_hwloc_2.10.0-GCCcore-13.3.0.lock | |
== 2024-05-23 11:09:57,640 easyblock.py:4291 WARNING build failed (first 300 chars): Missing modules for dependencies (use --robot?): libpciaccess/0.18.1-GCCcore-13.3.0 | |
== 2024-05-23 11:09:57,641 easyblock.py:328 INFO Closing log for application name hwloc version 2.10.0 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment