Created
December 8, 2022 04:48
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code for [video(BV1TP4y1h75Z)](https://www.bilibili.com/video/BV1TP4y1h75Z/?vd_source=8579eab403ebaedc61b3bfd1c6d9fa59), demonstrating the rationale for direct standardization
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x1 = c(0,1500,500,500) | |
y1 = c(0,975,470,475) | |
x2 = c(0,500,1500,500) | |
y2 = c(0,315,1365,460) | |
df_patients = data.frame( | |
patient_1 = x1, | |
cure_1 = y1, | |
patient_2 = x2, | |
cure_2 = y2 | |
)[2:length(df_patients),] | |
rate_calculate = function(x,y){ | |
x = x[2:length(x)] | |
y = y[2:length(y)] | |
return(y/x) | |
} | |
sum_vector = function(x){ | |
return (c(0,sum(x))) | |
} | |
library(ggplot2) | |
ggplot(data=NULL)+ | |
geom_line(aes(x=cumsum(x1),y=cumsum(y1)),color='black')+ | |
geom_point(aes(x=cumsum(x1),y=cumsum(y1)),color='black',size=2)+ | |
geom_line(aes(x=cumsum(x2),y=cumsum(y2)),color='red')+ | |
geom_point(aes(x=cumsum(x2),y=cumsum(y2)),color='red',size=2)+ | |
geom_line(aes(x=sum_vector(x1),y=sum_vector(y1)),color='black')+ | |
geom_line(aes(x=sum_vector(x2),y=sum_vector(y2)),color='red')+ | |
xlab('patients')+ | |
ylab('cures') | |
rate1 = rate_calculate(x1,y1) | |
rate2 = rate_calculate(x2,y2) | |
df = data.frame(segment=1:3,rate1=rate1,rate2=rate2) | |
ggplot(data=df)+geom_col(aes(y=rate1,x=segment))+geom_col(aes(y=rate2,x=segment),fill='red') | |
x_common = c(0,1000,1500,300) | |
y1_standard = x_common*c(0,rate1) | |
y2_standard = x_common*c(0,rate2) | |
ggplot(data=NULL)+ | |
geom_line(aes(x=cumsum(x_common),y=cumsum(y1_standard)),color='black')+ | |
geom_point(aes(x=cumsum(x_common),y=cumsum(y1_standard)),color='black')+ | |
geom_line(aes(x=cumsum(x_common),y=cumsum(y2_standard)),color='red')+ | |
geom_point(aes(x=cumsum(x_common),y=cumsum(y2_standard)),color='red')+ | |
geom_line(aes(x=sum_vector(x_common),y=sum_vector(y1_standard)),color='black')+ | |
geom_line(aes(x=sum_vector(x_common),y=sum_vector(y2_standard)),color='red')+ | |
xlab('patients')+ | |
ylab('cures') |
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