CI.yaml

---
# yamllint disable rule:line-length
name: CI

# yamllint disable-line rule:truthy
on:
  push:
    branches:
      - "master"
  pull_request:
    branches:
      - "master"

jobs:
  test:
    name: Test Python ${{ matrix.python-version }} / ${{ matrix.env-type.env-type-name }} / H5py ${{ matrix.h5py-version }}
    runs-on: self-hosted
    strategy:
      matrix:
        python-version: [3.6, 3.7, 3.8]
        # yamllint disable rule:braces
        env-type:
          - { env-type-name: venv, shell: bash }
          - { env-type-name: conda, shell: 'bash -l {0}' }
          # yamllint enable rule:braces
        h5py-version:
          # - "2.10"
          - "3"
    defaults:
      run:
        shell: ${{ matrix.env-type.shell }}
    steps:
      - uses: actions/checkout@v2
      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v2
        with:
          python-version: ${{ matrix.python-version }}
        if: ${{ matrix.env-type.env-type-name == 'venv' }}
      - name: Set up Python ${{ matrix.python-version }} with conda
        uses: conda-incubator/setup-miniconda@v2
        with:
          activate-environment: test
          auto-activate-base: false
          auto-update-conda: true
          # environment-file: devtools/conda-envs/test_env.yaml
          miniforge-version: latest
          python-version: ${{ matrix.python-version }}
          show-channel-urls: true
        if: ${{ matrix.env-type.env-type-name == 'conda' }}
      # This needs to come after the possible conda install due to using `bash -l {0}`.
      - name: Install HDF5 using system package manager
        run: |
          sudo apt-get update
          sudo apt-get install -y libhdf5-103
      - name: Update pip and setuptools
        run: python -m pip install -U pip setuptools
      - name: Print pip config
        run: python -m pip config list
      - name: Install test dependencies
        run: python -m pip install pytest-cov
      - name: Install package
        run: |
          python -m pip install .
          PACKAGE_INSTALL_DIR=$(python -c 'import libstore as _; print(_.__path__[0])')
          find $PACKAGE_INSTALL_DIR -type f | sort
      - name: Install h5py for venv via pip
        run: python -m pip install h5py==${{ matrix.h5py-version }}
        if: ${{ matrix.env-type.env-type-name == 'venv' }}
      - name: Install h5py for conda via conda
        run: conda install h5py=${{ matrix.h5py-version }}
        if: ${{ matrix.env-type.env-type-name == 'conda' }}
      - name: Print Python environment
        run: |
          python -m pip list
      - name: Print conda environment
        run: conda list
        if: ${{ matrix.env-type.env-type-name == 'conda' }}
      - name: Print conda info
        run: conda info
        if: ${{ matrix.env-type.env-type-name == 'conda' }}
      - name: Print conda config
        run: conda config --show
        if: ${{ matrix.env-type.env-type-name == 'conda' }}
      - name: Run tests
        run: |
          PACKAGE_INSTALL_DIR=$(python -c 'import libstore as _; print(_.__path__[0])')
          # Testing the installed package requires moving out of the source
          # directory.  There are problems with the pytest cache when trying
          # to run from a non-writable dir.
          cd ~
          python -m pytest -v --cov=libstore --cov-report=xml ${PACKAGE_INSTALL_DIR}
      # - name: CodeCov
      #   uses: codecov/codecov-action@v1
      #   with:
      #     file: ./coverage.xml
      #     flags: unittests
      #     name: codecov-py${{ matrix.python-version }}