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bewt85/all__compiledResults.txt Secret

Created December 24, 2015 12:01
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all__compiledResults.txt
Sample ST adk fumC gyrB icd mdh purA recA mismatches uncertainty depth maxMAF AMPH_Ecoli_Bla Aac3-IIa_AGly AadA_AGly AmpC1_Ecoli_Bla AmpC2_Ecoli_Bla CTX-M-1_Bla CatA1_Phe DfrA1_Tmt DfrA3b_Tmt Penicillin_Binding_Protein_Ecoli_Bla Sat-2A_AGly StrA_AGly StrB_AGly SulII_Sul SulI_Sul TEM-1D_Bla TetA_Tet TetB_Tet TetR_Tet
ERR024070 NF*? - - - - 14*? - 148*? mdh-14/42holes;recA-148/40holes mdh-14/edge1.0;recA-148/edge0.0 2.7 0.5 - - - AmpC1_1670*? - - - - - - - - StrB_1614*? - - - - - -
ERR024082 152? 11? 63 7 1 14 7 7 0 adk-11/edge2.0 15.5068571429 0.222222222222 AMPH_615* - AadA1-pm_1597*? AmpC1_1670* AmpC2_346* - - DfrA1_319 - Penicillin_Binding_Protein_Ecoli_836* Sat-2A_1088 StrA_1501* StrB_1614 SulII_1219 - - TetA_1545 - TetR_1473
ERR024619 152 11 63 7 1 14 7 7 0 - 22.1788571429 0.125 AMPH_615* - AadA1-pm_1597*? AmpC1_1670* AmpC2_346* - CatA1_1470* - DfrA3b_1578 Penicillin_Binding_Protein_Ecoli_836* - - - - SulI_1616 - - TetB_1213* -
ERR028678 152? 11? 63 7? 1 14 7 7 0 adk-11/edge2.0;gyrB-7/edge2.0 13.9001428571 0.125 AMPH_615* Aac3-IId_884* AadA1-pm_1597*? AmpC1_1670*? AmpC2_346* CTX-M-15_150 - DfrA1_319 - Penicillin_Binding_Protein_Ecoli_836* Sat-2A_1088 StrA_1501* StrB_1614 SulII_1219 - TEM-198_1035* TetA_1545*? - TetR_1473
ERR028690 152 11 63 7 1 14 7 7 0 - 21.4007142857 0.0909090909091 AMPH_615* - AadA1-pm_1597*? AmpC1_1670* AmpC2_346* - - DfrA1_319 - Penicillin_Binding_Protein_Ecoli_836* Sat-2A_1088 StrA_1501* StrB_1614 SulII_1219 - - TetA_1545 - TetR_1473
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