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ddn-discovery-demo
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| height: 800 |
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| // https://d3js.org/d3-force/ Version 1.1.0. Copyright 2018 Mike Bostock. | |
| (function (global, factory) { | |
| typeof exports === 'object' && typeof module !== 'undefined' ? factory(exports, require('d3-quadtree')) : | |
| typeof define === 'function' && define.amd ? define(['exports', 'd3-quadtree'], factory) : | |
| (factory((global.d3 = global.d3 || {}),global.d3)); | |
| }(this, (function (exports,d3Quadtree) { 'use strict'; | |
| var constant = function(x) { | |
| return function() { | |
| return x; | |
| }; | |
| }; | |
| var jiggle = function() { | |
| return (Math.random() - 0.5) * 1e-6; | |
| }; | |
| function x(d) { | |
| return d.x + d.vx; | |
| } | |
| function y(d) { | |
| return d.y + d.vy; | |
| } | |
| var collide_selective = function(radius) { | |
| var nodes, | |
| radii, | |
| strength = 1, | |
| iterations = 1, | |
| ignoredPairs = {}, | |
| radiiReduce = 0.75; | |
| if (typeof radius !== "function") radius = constant(radius == null ? 1 : +radius); | |
| function force() { | |
| var i, n = nodes.length, | |
| tree, | |
| node, | |
| xi, | |
| yi, | |
| ri, | |
| ri2; | |
| for (var k = 0; k < iterations; ++k) { | |
| tree = d3Quadtree.quadtree(nodes, x, y).visitAfter(prepare); | |
| for (i = 0; i < n; ++i) { | |
| node = nodes[i]; | |
| ri = radii[node.index], ri2 = ri * ri; | |
| xi = node.x + node.vx; | |
| yi = node.y + node.vy; | |
| tree.visit(apply); | |
| } | |
| } | |
| function apply(quad, x0, y0, x1, y1) { | |
| var data = quad.data, rj = quad.r, r = ri + rj; | |
| if (data) { | |
| if (data.index > node.index) { | |
| var x = xi - data.x - data.vx, | |
| y = yi - data.y - data.vy, | |
| l = x * x + y * y; | |
| // Utilizes the ignore dict and reduce the collision radius | |
| if (ignoredPairs[data.index] && ignoredPairs[data.index].includes(node.index)) | |
| r = r * radiiReduce; | |
| if (l < r * r) { | |
| if (x === 0) x = jiggle(), l += x * x; | |
| if (y === 0) y = jiggle(), l += y * y; | |
| l = (r - (l = Math.sqrt(l))) / l * strength; | |
| node.vx += (x *= l) * (r = (rj *= rj) / (ri2 + rj)); | |
| node.vy += (y *= l) * r; | |
| data.vx -= x * (r = 1 - r); | |
| data.vy -= y * r; | |
| } | |
| } | |
| return; | |
| } | |
| return x0 > xi + r || x1 < xi - r || y0 > yi + r || y1 < yi - r; | |
| } | |
| } | |
| function prepare(quad) { | |
| if (quad.data) return quad.r = radii[quad.data.index]; | |
| for (var i = quad.r = 0; i < 4; ++i) { | |
| if (quad[i] && quad[i].r > quad.r) { | |
| quad.r = quad[i].r; | |
| } | |
| } | |
| } | |
| function initialize() { | |
| if (!nodes) return; | |
| var i, n = nodes.length, node; | |
| radii = new Array(n); | |
| for (i = 0; i < n; ++i) node = nodes[i], radii[node.index] = +radius(node, i, nodes); | |
| } | |
| force.initialize = function(_) { | |
| nodes = _; | |
| initialize(); | |
| }; | |
| force.iterations = function(_) { | |
| return arguments.length ? (iterations = +_, force) : iterations; | |
| }; | |
| force.strength = function(_) { | |
| return arguments.length ? (strength = +_, force) : strength; | |
| }; | |
| force.radius = function(_) { | |
| return arguments.length ? (radius = typeof _ === "function" ? _ : constant(+_), initialize(), force) : radius; | |
| }; | |
| // Added an ignore dict (array per node index) | |
| force.ignore = function(_) { | |
| return arguments.length ? (ignoredPairs = _, force) : ignoredPairs; | |
| }; | |
| // Added a radii reduce percentage config var | |
| force.radiusOfIgnored = function(_) { | |
| return arguments.length ? (radiiReduce = _, force) : radiiReduce; | |
| }; | |
| return force; | |
| }; | |
| //export {default as forceCenter} from "./src/center"; | |
| //export {default as forceLink} from "./src/link"; | |
| //export {default as forceManyBody} from "./src/manyBody"; | |
| //export {default as forceRadial} from "./src/radial"; | |
| //export {default as forceSimulation} from "./src/simulation"; | |
| //export {default as forceX} from "./src/x"; | |
| //export {default as forceY} from "./src/y"; | |
| exports.forceCollideSelective = collide_selective; | |
| Object.defineProperty(exports, '__esModule', { value: true }); | |
| }))); |
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| "behavior Yggq yxsdfbwo swfd qrh vjt oqihcdvm.", | |
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| }, | |
| { | |
| "nodes": [ | |
| 10, | |
| 23 | |
| ], | |
| "shared_behaviors": [ | |
| "behavior Jxgge mfkdcw dkmopol weweq.", | |
| "behavior Grw rcclcebrow jbbptlwj xlya wjrldcicu." | |
| ] | |
| }, | |
| { | |
| "nodes": [ | |
| 0, | |
| 12 | |
| ], | |
| "shared_behaviors": [ | |
| "behavior Qoqy xhiaiv rugfluk emwrf gbxsu.", | |
| "behavior Ofhlqmis lzhhqxk gml qemqrwhei ofctxrljj.", | |
| "behavior Vbqf jywdizlbje brwho iilp.", | |
| "behavior Mrrmxbq apf kfghos mfkuhcfru foopj.", | |
| "behavior Xzxdn wdsqrhcei nyldvn vninjipa xhtcvxy." | |
| ] | |
| } | |
| ], | |
| "connections": [ | |
| { | |
| "nodes": [ | |
| 2, | |
| 0 | |
| ], | |
| "volumes": [ | |
| { | |
| "direction": "l2r", | |
| "size": 51, | |
| "unit": "GB" | |
| }, | |
| { | |
| "direction": "r2l", | |
| "size": 64, | |
| "unit": "MB" | |
| } | |
| ], | |
| "apps": [ | |
| "nntp", | |
| "mailto", | |
| "prospero", | |
| "mid", | |
| "http" | |
| ], | |
| "users": [ | |
| "timothy", | |
| "laura", | |
| "ronald", | |
| "eric", | |
| "william", | |
| "jennifer", | |
| "sarah", | |
| "george" | |
| ] | |
| }, | |
| { | |
| "nodes": [ | |
| 19, | |
| 7 | |
| ], | |
| "volumes": [ | |
| { | |
| "direction": "l2r", | |
| "size": 66, | |
| "unit": "B" | |
| }, | |
| { | |
| "direction": "r2l", | |
| "size": 90, | |
| "unit": "MB" | |
| } | |
| ], | |
| "apps": [ | |
| "mailto", | |
| "rlogin", | |
| "tn3270", | |
| "nntp", | |
| "telnet" | |
| ], | |
| "users": [ | |
| "matthew", | |
| "melissa" | |
| ] | |
| }, | |
| { | |
| "nodes": [ | |
| 14, | |
| 6 | |
| ], | |
| "volumes": [ | |
| { | |
| "direction": "l2r", | |
| "size": 88, | |
| "unit": "MB" | |
| }, | |
| { | |
| "direction": "r2l", | |
| "size": 30, | |
| "unit": "MB" | |
| } | |
| ], | |
| "apps": [ | |
| "gopher", | |
| "mid", | |
| "gopher" | |
| ], | |
| "users": [ | |
| "michael", | |
| "angela", | |
| "michael", | |
| "karen", | |
| "frank" | |
| ] | |
| }, | |
| { | |
| "nodes": [ | |
| 24, | |
| 4 | |
| ], | |
| "volumes": [ | |
| { | |
| "direction": "l2r", | |
| "size": 4, | |
| "unit": "GB" | |
| }, | |
| { | |
| "direction": "r2l", | |
| "size": 41, | |
| "unit": "KB" | |
| } | |
| ], | |
| "apps": [ | |
| "telnet", | |
| "telnet", | |
| "telnet", | |
| "news", | |
| "telnet" | |
| ], | |
| "users": [ | |
| "donald", | |
| "charles", | |
| "cynthia", | |
| "margaret", | |
| "elizabeth", | |
| "donald", | |
| "gary", | |
| "larry", | |
| "steven" | |
| ] | |
| }, | |
| { | |
| "nodes": [ | |
| 1, | |
| 9 | |
| ], | |
| "volumes": [ | |
| { | |
| "direction": "l2r", | |
| "size": 48, | |
| "unit": "MB" | |
| }, | |
| { | |
| "direction": "r2l", | |
| "size": 57, | |
| "unit": "KB" | |
| } | |
| ], | |
| "apps": [ | |
| "news", | |
| "tn3270", | |
| "telnet" | |
| ], | |
| "users": [ | |
| "joseph", | |
| "shirley", | |
| "linda", | |
| "matthew", | |
| "michelle", | |
| "frank", | |
| "margaret", | |
| "sharon", | |
| "brian" | |
| ] | |
| }, | |
| { | |
| "nodes": [ | |
| 10, | |
| 16 | |
| ], | |
| "volumes": [ | |
| { | |
| "direction": "l2r", | |
| "size": 39, | |
| "unit": "GB" | |
| }, | |
| { | |
| "direction": "r2l", | |
| "size": 20, | |
| "unit": "GB" | |
| } | |
| ], | |
| "apps": [ | |
| "nntp", | |
| "telnet", | |
| "gopher", | |
| "mailto", | |
| "prospero" | |
| ], | |
| "users": [ | |
| "margaret", | |
| "joseph", | |
| "linda" | |
| ] | |
| } | |
| ] | |
| } |
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| /** | |
| * Drawing the DDN circles with overlapping to indicate #of shared behaviors. | |
| * | |
| * Overlapping impl | |
| * ---------------- | |
| * a. Custom selective Collide Force (*Yes, currently in use) | |
| * b. Custom negative Link Force (?Considering, not yet in use) | |
| * | |
| * @author Tim Lauv | |
| * @created 2018.06.08 | |
| */ | |
| document.addEventListener('DOMContentLoaded', function(){ | |
| console.log('READY!'); | |
| // Globals | |
| var volumeScale = { | |
| 'B': 1, | |
| 'KB': 1.024, | |
| 'MB': 1.024 * 1.024, | |
| 'GB': 1.024 * 1.024 * 1.024, | |
| 'TB': 1.024 * 1.024 * 1.024 * 1.024, | |
| } | |
| // Hooks up the <SVG> canvas in index.html | |
| var svg = d3.select('svg'), | |
| width = svg.attr('width'), | |
| height = svg.attr('height'); | |
| // D3 Forces (simulation) | |
| var sim = d3.forceSimulation() | |
| .force('center', d3.forceCenter(width / 2, height / 2)) | |
| .force('overlap', d3.forceLink().id(d => d.index).strength(0.5)) | |
| .force('collide', d3.forceCollideSelective().radius(d => d.volume * volumeScale[d['volume-unit']] / 1.5 + 4).strength(0.1)) | |
| //.force('charge', d3.forceManyBody().strength(10)); | |
| // Raw data in JSON format | |
| d3.json('ddn-discovery-data-sample.json').then(data => { | |
| var extracted = { | |
| nodes: [], | |
| links: [], | |
| }; | |
| // Note: extract nodes/edges and calculate connected group index for coloring (sort by source index) | |
| extracted.nodes = data.nodes; | |
| extracted.links = data.overlappings.map(edge => { | |
| return {source: edge.nodes[0], target: edge.nodes[1], sortIndex: edge.nodes[0] + 1}; | |
| }).sort(function(a, b){ | |
| return a.sortIndex - b.sortIndex; | |
| }); | |
| var ignoredPairs = {} | |
| extracted.links.forEach(edge => { | |
| extracted.nodes[edge.source].groupIndex = extracted.nodes[edge.source].groupIndex || edge.sortIndex; | |
| extracted.nodes[edge.target].groupIndex = extracted.nodes[edge.source].groupIndex; | |
| var ignoredPair = ignoredPairs[edge.source] || []; | |
| ignoredPair.push(edge.target); | |
| ignoredPairs[edge.source] = ignoredPair; | |
| ignoredPair = ignoredPairs[edge.target] || []; | |
| ignoredPair.push(edge.source); | |
| ignoredPairs[edge.target] = ignoredPair; | |
| }); | |
| sim.force('collide').ignore(ignoredPairs); | |
| // Graphics Rendering (create svg elements to represent extracted.nodes/links) | |
| var g_link = svg.append('g').attr('class', 'links').selectAll('line').data(extracted.links).enter() | |
| .append('line'); | |
| var g_node = svg.append('g').attr('class', 'nodes').selectAll('circle').data(extracted.nodes).enter() | |
| .append('circle') | |
| .attr('r', d => d.volume * volumeScale[d['volume-unit']] / 1.5) | |
| .attr('fill', d => !d.groupIndex ? '#FFFFFF' : d3.interpolateCool(d.groupIndex / extracted.nodes.length)); | |
| // Patch extracted.nodes/links data with force adjusted position values | |
| sim.nodes(extracted.nodes) | |
| // Upon position changes (per ticking) update svg elements accordingly | |
| .on('tick', function(){ | |
| // Note: .x, .y is now adjusted by the forces! | |
| g_node.attr('cx', d => d.x) | |
| .attr('cy', d => d.y); | |
| g_link.attr('x1', d => d.source.x) | |
| .attr('y1', d => d.source.y) | |
| .attr('x2', d => d.target.x) | |
| .attr('y2', d => d.target.y); | |
| }).force('overlap').links(extracted.links); | |
| // Note: must add nodes before links! since link refers to nodes!! | |
| }); | |
| }); |
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| <!DOCTYPE html> | |
| <meta charset="utf-8"> | |
| <style> | |
| .nodes circle { | |
| /*fill: none;*/ | |
| fill-opacity: 0.4; | |
| stroke: #000000; | |
| stroke-width: 3px; | |
| } | |
| .links line { | |
| stroke: #dddddd; | |
| stroke-width: 2px; | |
| } | |
| </style> | |
| <svg width="960" height="800"></svg> | |
| <script src="https://d3js.org/d3.v5.min.js"></script> | |
| <script src="d3-force-custom.js"></script> | |
| <script src="draw.js"></script> |
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