Jake Fenton bocajnotnef

## instructions.md

      
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              March 28, 2024 08:17
            
              
                scripts for converting the 1993 annotated RTF files of "A Fire Upon The Deep" to HTML
              
          
    source material

You'll need the download of the Hugo 1993 files, available from here. If that link dies, you can scour the original HackerNews post to see if anyone has a mirror, or if there's other helpful files
deps

mac


libreoffice installed to the Applications/ dir
xmllint I think comes for free?
coreutils from brew (e.g. brew install coreutils)


## namecheap_dynamic_dns_updater.sh
#!/usr/bin/env bash

# script to update the dynamic dns address of a namecheap domain
# usage: ./updater.sh <host> <domain> <password>

if [ "$#" -ne 3 ]; then
    echo "Illegal number of parameters"
    echo "usage: ${0} <host> <domain> <password>"
    exit -1
fi

## index.html
<!DOCTYPE html>
<html>
  <head>
  </head>
  <body>
    <div id=chart_area>
    </div>
    <input type="range" name="range" class="slider" id="year_slider" value="2007" min="1952" max="2007" step="5" ><br>
  <script src="https://d3js.org/d3.v4.min.js"></script>
  <script src="main.js"></script>

## test_extract_partitions.sh
# the next command will create a '50m.ht' and a '50m.tagset',
# representing the de Bruijn graph
scripts/load-graph.py -k 32 -N 4 -x 12e9 25k 25k-casava1_8.fq.bz2

# this will then partition that graph. should take a while.
# update threads to something higher if you have more cores.
# this creates a bunch of files, 50m.subset.*.pmap
scripts/partition-graph.py --threads 4 -s 1e5 25k

# now, merge the pmap files into one big pmap file, 50m.pmap.merged
	#!/usr/bin/env bash

	# script to update the dynamic dns address of a namecheap domain
	# usage: ./updater.sh <host> <domain> <password>

	if [ "$#" -ne 3 ]; then
	echo "Illegal number of parameters"
	echo "usage: ${0} <host> <domain> <password>"
	exit -1
	fi
	<!DOCTYPE html>
	<html>
	<head>
	</head>
	<body>
	<div id=chart_area>
	</div>
	<input type="range" name="range" class="slider" id="year_slider" value="2007" min="1952" max="2007" step="5" ><br>
	<script src="https://d3js.org/d3.v4.min.js"></script>
	<script src="main.js"></script>
	# the next command will create a '50m.ht' and a '50m.tagset',
	# representing the de Bruijn graph
	scripts/load-graph.py -k 32 -N 4 -x 12e9 25k 25k-casava1_8.fq.bz2

	# this will then partition that graph. should take a while.
	# update threads to something higher if you have more cores.
	# this creates a bunch of files, 50m.subset.*.pmap
	scripts/partition-graph.py --threads 4 -s 1e5 25k

	# now, merge the pmap files into one big pmap file, 50m.pmap.merged