Created
January 4, 2017 14:11
-
-
Save boegel/685ef2da5cb99cc2d682a4da404082fa to your computer and use it in GitHub Desktop.
(partial) EasyBuild log for failed build of /tmp/eb-nkl3do/files_pr3968/g/GCC/GCC-6.3.0-2.27.eb (PR #3968)
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
== 2017-01-04 15:11:32,618 easyblock.py:261 INFO This is EasyBuild 3.0.2 (framework: 3.0.2, easyblocks: 3.0.2) on host node2519.golett.os. | |
== 2017-01-04 15:11:32,618 easyblock.py:267 INFO This is easyblock Bundle from module easybuild.easyblocks.generic.bundle (/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyblocks/generic/bundle.pyo) | |
== 2017-01-04 15:11:32,618 easyblock.py:753 INFO Build dir set to /tmp/vsc40023/easybuild_build/GCC/6.3.0/dummy--2.27 | |
== 2017-01-04 15:11:32,618 config.py:423 DEBUG software install path as specified by 'installpath' and 'subdir_software': /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software | |
== 2017-01-04 15:11:32,618 easyconfig.py:1650 DEBUG Determining software installation subdir for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,619 easyconfig.py:1656 DEBUG Obtained subdir GCC/6.3.0-2.27 | |
== 2017-01-04 15:11:32,619 easyblock.py:792 INFO Software install dir set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCC/6.3.0-2.27 | |
== 2017-01-04 15:11:32,619 config.py:423 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules | |
== 2017-01-04 15:11:32,619 easyblock.py:797 INFO Module install dir set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all | |
== 2017-01-04 15:11:32,619 easyblock.py:246 INFO Init completed for application name GCC version 6.3.0 | |
== 2017-01-04 15:11:32,619 easyblock.py:2477 INFO Obtained application instance of for GCC (easyblock: Bundle) | |
== 2017-01-04 15:11:32,619 easyblock.py:2490 DEBUG Skip set to False | |
== 2017-01-04 15:11:32,620 build_log.py:216 INFO building and installing GCC/6.3.0-2.27... | |
== 2017-01-04 15:11:32,620 easyblock.py:2263 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True | |
== 2017-01-04 15:11:32,620 build_log.py:216 INFO fetching files... | |
== 2017-01-04 15:11:32,620 easyblock.py:2271 INFO Starting fetch step | |
== 2017-01-04 15:11:32,620 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,620 templates.py:175 DEBUG version found in easyconfig is 6.3.0 | |
== 2017-01-04 15:11:32,620 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 15:11:32,621 templates.py:219 DEBUG name: name, config: GCC | |
== 2017-01-04 15:11:32,621 templates.py:219 DEBUG name: version, config: 6.3.0 | |
== 2017-01-04 15:11:32,621 templates.py:219 DEBUG name: versionsuffix, config: -2.27 | |
== 2017-01-04 15:11:32,621 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 15:11:32,621 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,621 templates.py:175 DEBUG version found in easyconfig is 6.3.0 | |
== 2017-01-04 15:11:32,621 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 15:11:32,621 templates.py:219 DEBUG name: name, config: GCC | |
== 2017-01-04 15:11:32,622 templates.py:219 DEBUG name: version, config: 6.3.0 | |
== 2017-01-04 15:11:32,622 templates.py:219 DEBUG name: versionsuffix, config: -2.27 | |
== 2017-01-04 15:11:32,622 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 15:11:32,622 easyblock.py:2274 INFO Running method fetch_step part of step fetch | |
== 2017-01-04 15:11:32,622 easyblock.py:1446 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
== 2017-01-04 15:11:32,622 easyblock.py:1472 INFO no sources provided | |
== 2017-01-04 15:11:32,622 easyblock.py:1487 INFO no patches provided | |
== 2017-01-04 15:11:32,622 config.py:423 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules | |
== 2017-01-04 15:11:32,623 easyblock.py:1513 INFO Checking dirs that need to be created: ['/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCC/6.3.0-2.27', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all/GCC', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/compiler/GCC'] | |
== 2017-01-04 15:11:32,624 filetools.py:995 DEBUG Not creating existing path /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCC/6.3.0-2.27 | |
== 2017-01-04 15:11:32,624 filetools.py:995 DEBUG Not creating existing path /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all/GCC | |
== 2017-01-04 15:11:32,626 filetools.py:995 DEBUG Not creating existing path /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/compiler/GCC | |
== 2017-01-04 15:11:32,626 easyblock.py:2263 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True | |
== 2017-01-04 15:11:32,626 build_log.py:216 INFO creating build dir, resetting environment... | |
== 2017-01-04 15:11:32,626 easyblock.py:2271 INFO Starting ready step | |
== 2017-01-04 15:11:32,627 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,627 templates.py:175 DEBUG version found in easyconfig is 6.3.0 | |
== 2017-01-04 15:11:32,627 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 15:11:32,627 templates.py:219 DEBUG name: name, config: GCC | |
== 2017-01-04 15:11:32,627 templates.py:219 DEBUG name: version, config: 6.3.0 | |
== 2017-01-04 15:11:32,627 templates.py:219 DEBUG name: versionsuffix, config: -2.27 | |
== 2017-01-04 15:11:32,627 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 15:11:32,628 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,628 templates.py:175 DEBUG version found in easyconfig is 6.3.0 | |
== 2017-01-04 15:11:32,628 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 15:11:32,628 templates.py:219 DEBUG name: name, config: GCC | |
== 2017-01-04 15:11:32,628 templates.py:219 DEBUG name: version, config: 6.3.0 | |
== 2017-01-04 15:11:32,628 templates.py:219 DEBUG name: versionsuffix, config: -2.27 | |
== 2017-01-04 15:11:32,628 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 15:11:32,629 easyblock.py:2274 INFO Running method check_readiness_step part of step ready | |
== 2017-01-04 15:11:32,629 easyblock.py:1401 DEBUG Desired parallelism specified via 'parallel' build option: None | |
== 2017-01-04 15:11:32,629 affinity.py:209 DEBUG sched_getaffinity for pid 19678 returned cpuset 0-23 | |
== 2017-01-04 15:11:32,630 run.py:86 DEBUG Using cached value for command 'ulimit -u': ('4096\n', 0) | |
== 2017-01-04 15:11:32,630 easyblock.py:1404 INFO Setting parallelism: 24 | |
== 2017-01-04 15:11:32,630 modules.py:634 DEBUG Current MODULEPATH: /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc | |
== 2017-01-04 15:11:32,630 modules.py:641 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command | |
== 2017-01-04 15:11:32,630 modules.py:641 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command | |
== 2017-01-04 15:11:32,630 modules.py:645 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python --terse list' from /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023/2017a | |
== 2017-01-04 15:11:32,665 modules.py:651 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python --terse list': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["_ModuleTable001_"] = "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"; | |
os.environ["_ModuleTable002_"] = "LH0sfSxbInNob3J0Il09ImNsdXN0ZXIiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSx9LG1wYXRoQT17Ii91c2VyL2hvbWUvZ2VudC92c2M0MDAvdnNjNDAwMjMvZWJfcGhhbnB5c2NyYXRjaC9DTzcvaGFzd2VsbC1pYi9tb2R1bGVzL2FsbCIsIi9ldGMvbW9kdWxlZmlsZXMvdnNjIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9ldGMvbW9kdWxlZmlsZXMvdnNjIixbInZlcnNpb24iXT0yLH0="; | |
os.environ["_ModuleTable_Sz_"] = "2"; | |
; stderr: cluster/golett | |
== 2017-01-04 15:11:32,665 modules.py:968 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python --terse list' ran fine | |
== 2017-01-04 15:11:32,666 modules.py:682 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to [] | |
== 2017-01-04 15:11:32,666 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '') | |
== 2017-01-04 15:11:32,666 modules.py:682 DEBUG Correcting paths in $LD_PRELOAD from [''] to [] | |
== 2017-01-04 15:11:32,666 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
== 2017-01-04 15:11:32,666 easyblock.py:1409 WARNING Loaded modules detected: ['cluster/golett'] | |
== 2017-01-04 15:11:32,667 utilities.py:101 DEBUG Skipping importing of toolchain modules, processing of toolchain constants is already done. | |
== 2017-01-04 15:11:32,667 toolchain.py:189 DEBUG Copied class constants: {} | |
== 2017-01-04 15:11:32,668 utilities.py:140 DEBUG Obtained new toolchain instance for ('dummy', ''): {'dummy': True, 'versionsuffix': '', 'version': '', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'dummy', 'full_mod_name': None, 'hidden': False, 'parsed': True, 'short_mod_name': None} | |
== 2017-01-04 15:11:32,668 options.py:64 DEBUG _add_options: adding options {'precise': (False, 'High precision'), 'verbose': (False, 'Verbose output'), 'rpath': (True, 'Use RPATH wrappers when --rpath is enabled in EasyBuild configuration'), 'pic': (False, 'Use PIC'), 'static': (False, 'Build static library'), 'optarch': (True, 'Enable architecture optimizations'), 'ieee': (False, 'Adhere to IEEE-754 rules'), 'veryloose': (False, 'Very loose precision'), 'strict': (False, 'Strict (highest) precision'), 'unroll': (False, 'Unroll loops'), 'lowopt': (False, 'Low compiler optimizations'), 'shared': (False, 'Build shared library'), 'opt': (False, 'High compiler optimizations'), 'i8': (False, 'Integers are 8 byte integers'), 'loose': (False, 'Loose precision'), 'cstd': (None, 'Specify C standard'), 'defaultprec': (False, 'Default precision'), 'openmp': (False, 'Enable OpenMP'), 'noopt': (False, 'Disable compiler optimizations'), 'packed-linker-options': (False, 'Pack the linker options as comma separated list'), 'r8': (False, 'Real is 8 byte real'), 'cciscxx': (False, 'Use CC as CXX'), '32bit': (False, 'Compile 32bit target'), 'debug': (False, 'Enable debug'), 'defaultopt': (False, 'Default compiler optimizations')} | |
== 2017-01-04 15:11:32,669 systemtools.py:208 DEBUG Determined CPU architecture: x86_64 | |
== 2017-01-04 15:11:32,669 systemtools.py:244 DEBUG Determined CPU vendor on Linux as being 'Intel' via regex 'vendor_id\s+:\s*(\S+)' in /proc/cpuinfo | |
== 2017-01-04 15:11:32,669 systemtools.py:270 DEBUG Using vendor as CPU family: Intel | |
== 2017-01-04 15:11:32,669 compiler.py:147 DEBUG _compiler_set_options: compiler toolchain options {'precise': False, 'verbose': False, 'rpath': True, 'pic': False, 'static': False, 'optarch': True, 'ieee': False, 'veryloose': False, 'strict': False, 'unroll': False, 'lowopt': False, 'shared': False, 'opt': False, 'i8': False, 'loose': False, 'cstd': None, 'defaultprec': False, 'openmp': False, 'noopt': False, 'packed-linker-options': False, 'r8': False, 'cciscxx': False, '32bit': False, 'debug': False, 'defaultopt': False} | |
== 2017-01-04 15:11:32,670 easyconfig.py:666 DEBUG Initialized toolchain: {'dummy': True, 'versionsuffix': '', 'version': '', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'dummy', 'full_mod_name': None, 'hidden': False, 'parsed': True, 'short_mod_name': None} (opts: None) | |
== 2017-01-04 15:11:32,670 easyconfig.py:608 DEBUG Dependencies BEFORE filtering: [{'external_module_metadata': {}, 'full_mod_name': 'GCCcore/6.3.0', 'toolchain': {'version': '', 'name': 'dummy'}, 'name': 'GCCcore', 'dummy': True, 'short_mod_name': 'GCCcore/6.3.0', 'external_module': False, 'versionsuffix': '', 'version': '6.3.0', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'binutils/2.27-GCCcore-6.3.0', 'toolchain': {'version': '6.3.0', 'name': 'GCCcore'}, 'name': 'binutils', 'dummy': False, 'short_mod_name': 'binutils/2.27-GCCcore-6.3.0', 'external_module': False, 'versionsuffix': '', 'version': '2.27', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}] | |
== 2017-01-04 15:11:32,670 toolchain.py:375 DEBUG add_dependencies: adding toolchain dependencies [{'external_module_metadata': {}, 'full_mod_name': 'GCCcore/6.3.0', 'toolchain': {'version': '', 'name': 'dummy'}, 'name': 'GCCcore', 'dummy': True, 'short_mod_name': 'GCCcore/6.3.0', 'external_module': False, 'versionsuffix': '', 'version': '6.3.0', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'binutils/2.27-GCCcore-6.3.0', 'toolchain': {'version': '6.3.0', 'name': 'GCCcore'}, 'name': 'binutils', 'dummy': False, 'short_mod_name': 'binutils/2.27-GCCcore-6.3.0', 'external_module': False, 'versionsuffix': '', 'version': '2.27', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}] | |
== 2017-01-04 15:11:32,670 modules.py:418 DEBUG Found cached result for 'module avail' with key '('MODULEPATH=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc', 'lmod', '--show-hidden')': ['3to2/1.1.1-intel-2016b-Python-2.7.12', 'ABINIT/8.0.8b-intel-2016b', 'ART/2016.06.05-intel-2016b', 'ASE/3.11.0-intel-2016b-Python-2.7.12', 'ATK/2.22.0-intel-2016b', 'Autoconf/2.69-foss-2016b', 'Autoconf/2.69-foss-2017a', 'Autoconf/2.69-intel-2016b', 'Automake/1.15-foss-2016b', 'Automake/1.15-foss-2017a', 'Automake/1.15-intel-2016b', 'Autotools/20150215-foss-2016b', 'Autotools/20150215-foss-2017a', 'Autotools/20150215-intel-2016b', 'BBMap/36.62-intel-2016b-Java-1.8.0_112', 'BEDTools/2.26.0-intel-2016b', 'BWA/0.7.15-intel-2016b', 'BamTools/2.4.0-foss-2016b', 'BamUtil/1.0.13-intel-2016b', 'BioPerl/1.7.0-foss-2016b-Perl-5.24.0', 'Biopython/1.68-foss-2016b-Python-2.7.12', 'Biopython/1.68-intel-2016b-Python-2.7.12', 'Biopython/1.68-intel-2016b-Python-3.5.2', 'Bison/2.7', 'Bison/3.0.4', 'Bison/3.0.4-GCCcore-5.4.0', 'Bison/3.0.4-GCCcore-6.3.0', 'Bison/3.0.4-foss-2016b', 'Bison/3.0.4-intel-2016b', 'Blender/2.77a-intel-2016b-Python-3.5.2', 'Blosc/1.11.1-intel-2016b', 'Boost/1.61.0-foss-2016b', 'Boost/1.61.0-foss-2016b-Python-2.7.12', 'Boost/1.61.0-intel-2016b', 'Boost/1.61.0-intel-2016b-Python-2.7.12', 'CBLAS/20110120-foss-2016b', 'CDO/1.7.2-intel-2016b', 'CGAL/4.8.1-intel-2016b', 'CGAL/4.8.1-intel-2016b-Python-2.7.12', 'CMake/3.4.3-foss-2016b', 'CMake/3.5.2-foss-2016b', 'CMake/3.5.2-intel-2016b', 'CMake/3.6.1-foss-2016b', 'CMake/3.6.1-intel-2016b', 'CMake/3.6.2-foss-2016b', 'CMake/3.6.2-intel-2016b', 'CMake/3.7.1-intel-2016b', 'CP2K/3.0-intel-2016b', 'CP2K/3.0-intel-2016b-psmp', 'Cantera/2.2.1-intel-2016b-Python-2.7.12', 'Cargo/0.13.0-foss-2016b', 'CheMPS2/1.8-intel-2016b', 'Clustal-Omega/1.2.0-foss-2016b', 'ClustalW2/2.1-foss-2016b', 'CryptoMiniSat/5.0.1-intel-2016b-Python-2.7.12', 'Cufflinks/2.2.1-foss-2016b', 'DBD-mysql/4.033-intel-2016b-Perl-5.24.0', 'DBus/1.10.12-intel-2016b', 'DL_POLY_Classic/1.9-intel-2016b', 'DL_POLY_Classic/1.9-intel-2016b-PLUMED-2.2.3', 'Doxygen/1.8.11-foss-2016b', 'Doxygen/1.8.11-intel-2016b', 'EIGENSOFT/6.1.4-foss-2016b', 'ETE/3.0.0b36-intel-2016b-Python-2.7.12', 'EasyBuild/3.0.2', 'Eigen/3.2.3-foss-2016b', 'Eigen/3.2.9-intel-2016b', 'Elk/4.0.15-intel-2016b', 'Exonerate/2.4.0-foss-2016b', 'FASTX-Toolkit/0.0.14-foss-2016b', 'FDS/6.5.2-intel-2016b', 'FFTW/3.3.4-gompi-2016b', 'FFTW/3.3.5-gompi-2016b', 'FFTW/3.3.5-gompi-2017a', 'FFTW/3.3.5-intel-2016b', 'FFmpeg/3.1.3-intel-2016b', 'FGSL/1.1.0-intel-2016b', 'FLTK/1.3.3-foss-2016b', 'FLTK/1.3.3-intel-2016b', 'FastQC/0.11.5-Java-1.7.0_80', 'GCC/5.4.0-2.26', 'GCC/6.3.0-2.27', 'GCCcore/5.4.0', 'GCCcore/6.3.0', 'GConf/3.2.6-intel-2016b', 'GDAL/2.1.0-foss-2016b', 'GDAL/2.1.0-intel-2016b', 'GDAL/2.1.1-intel-2016b-Python-2.7.12', 'GDB/7.11.1-intel-2016b-Python-2.7.12', 'GEOS/3.5.0-intel-2016b-Python-2.7.12', 'GL2PS/1.3.9-intel-2016b', 'GLPK/4.60-intel-2016b', 'GLib/2.49.5-foss-2016b', 'GLib/2.49.5-intel-2016b', 'GMAP-GSNAP/2016-11-07-foss-2016b', 'GMP/6.1.1-foss-2016b', 'GMP/6.1.1-intel-2016b', 'GMP/6.1.2-foss-2017a', 'GObject-Introspection/1.49.1-intel-2016b', 'GRIT/2.0.5-intel-2016b-Python-2.7.12', 'GROMACS/2016-foss-2016b-hybrid', 'GROMACS/2016-foss-2016b-mt', 'GROMACS/5.1.4-foss-2016b-hybrid', 'GROMACS/5.1.4-foss-2016b-mt', 'GSL/2.1-foss-2016b', 'GSL/2.1-intel-2016b', 'GSL/2.2.1-intel-2016b', 'GSL/2.3-foss-2016b', 'GST-plugins-base/0.10.36-intel-2016b', 'GStreamer/0.10.36-intel-2016b', 'GTK+/2.24.31-intel-2016b', 'GTS/0.7.6-intel-2016b', 'Gdk-Pixbuf/2.36.0-intel-2016b', 'Ghostscript/9.19-intel-2016b', 'Ghostscript/9.20-intel-2016b', 'GraphicsMagick/1.3.25-intel-2016b', 'Graphviz/2.38.0-intel-2016b', 'Greenlet/0.4.11-intel-2016b-Python-2.7.12', 'Guile/1.8.8-intel-2016b', 'H5hut/1.99.13-intel-2016b', 'HDF5/1.10.0-patch1-foss-2016b', 'HDF5/1.10.0-patch1-intel-2016b', 'HDF5/1.8.12-intel-2016b', 'HDF5/1.8.17-foss-2016b', 'HDF5/1.8.17-intel-2016b', 'HDF5/1.8.17-intel-2016b-serial', 'HDF5/1.8.18-foss-2016b', 'HDF5/1.8.18-intel-2016b', 'HISAT2/2.0.4-foss-2016b', 'HPL/2.1-foss-2016b', 'HPL/2.1-intel-2016b', 'HPL/2.2-foss-2017a', 'HPL/2.2-intel-2017a', 'HTSeq/0.6.1p1-foss-2016b-Python-2.7.12', 'HTSeq/0.6.1p1-intel-2016b-Python-2.7.12', 'HTSlib/1.3.1-foss-2016b', 'HTSlib/1.3.1-intel-2016b', 'HTSlib/1.3.2-intel-2016b', 'HarfBuzz/1.3.1-intel-2016b', 'IMa2p/20160804-intel-2016b', 'IPython/5.1.0-intel-2016b-Python-2.7.12', 'IPython/5.1.0-intel-2016b-Python-3.5.2', 'ImageMagick/7.0.3-1-intel-2016b', 'IronPython/2.7-intel-2016b', 'JUnit/4.12-Java-1.8.0_92', 'JasPer/1.900.1-intel-2016b', 'Java/1.7.0_80', 'Java/1.8.0_112', 'Java/1.8.0_92', 'Jellyfish/1.1.11-foss-2016b', 'Keras/1.0.8-intel-2016b-Python-3.5.2', 'Keras/1.1.0-intel-2016b-Python-3.5.2', 'Kraken/0.10.5-beta-foss-2016b-Perl-5.24.0', 'LLVM/3.8.1-foss-2016b', 'LLVM/3.8.1-intel-2016b', 'LLVM/3.9.0-foss-2016b', 'LLVM/3.9.0-intel-2016b', 'LZO/2.09-intel-2016b', 'LibTIFF/4.0.6-foss-2016b', 'LibTIFF/4.0.6-intel-2016b', 'Libint/1.1.6-intel-2016b', 'Libint/2.1.0-intel-2016b', 'LittleCMS/2.8-intel-2016b', 'LoFreq/2.1.2-intel-2016b-Python-2.7.12', 'Loki/0.1.7-intel-2016b', 'M4/1.4.16', 'M4/1.4.17', 'M4/1.4.17-GCCcore-5.4.0', 'M4/1.4.17-GCCcore-6.3.0', 'M4/1.4.17-foss-2016b', 'M4/1.4.17-foss-2017a', 'M4/1.4.17-intel-2016b', 'M4/1.4.18-GCCcore-6.3.0', 'MAFFT/7.305-foss-2016b-with-extensions', 'MATSim/0.8.1-intel-2016b-Java-1.8.0_112', 'METIS/5.1.0-foss-2016b', 'METIS/5.1.0-intel-2016b', 'MPFR/3.1.4-intel-2016b', 'MUMmer/3.23-foss-2016b', 'Mako/1.0.4-foss-2016b-Python-2.7.12', 'Mako/1.0.4-intel-2016b-Python-2.7.12', 'MariaDB/10.1.17-intel-2016b', 'Mesa/12.0.2-foss-2016b', 'Mesa/12.0.2-intel-2016b', 'Mono/2.10.6-intel-2016b', 'Mono/4.6.2.7-intel-2016b', 'MyMediaLite/3.10-intel-2016b', 'MyMediaLite/3.11-intel-2016b', 'NASM/2.11.08-foss-2016b', 'NASM/2.12.02-foss-2016b', 'NASM/2.12.02-intel-2016b', 'NGS/1.2.3-foss-2016b', 'NGS/1.2.5-foss-2016b', 'Oases/0.2.08-foss-2016b', 'Octave/4.0.3-intel-2016b', 'OpenBLAS/0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.1', 'OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.6.1', 'OpenCV/3.1.0-intel-2016b', 'OpenEXR/2.2.0-intel-2016b', 'OpenFOAM/3.0.1-intel-2016b', 'OpenFOAM/4.0-intel-2016b', 'OpenImageIO/1.6.17-intel-2016b', 'OpenMPI/1.10.3-GCC-5.4.0-2.26', 'OpenMPI/2.0.1-GCC-6.3.0-2.27', 'OpenPGM/5.2.122-foss-2016b', 'OpenPGM/5.2.122-intel-2016b', 'PCRE/8.38-foss-2016b', 'PCRE/8.38-intel-2016b', 'PCRE/8.39-foss-2016b', 'PCRE/8.39-intel-2016b', 'PIL/1.1.7-intel-2016b-Python-2.7.12', 'PLINK/1.07-foss-2016b', 'PLUMED/2.2.3-intel-2016b', 'PLplot/5.11.1-intel-2016b-Java-1.7.0_80-Python-2.7.12', 'POV-Ray/3.7.0.0-intel-2016b', 'PROJ/4.9.2-foss-2016b', 'PROJ/4.9.2-intel-2016b', 'Pango/1.40.3-intel-2016b', 'ParaView/5.1.2-intel-2016b-mpi', 'Perl/5.22.1-foss-2016b', 'Perl/5.24.0-foss-2016b', 'Perl/5.24.0-intel-2016b', 'PhyloBayes-MPI/20161021-intel-2016b', 'Pillow/3.4.2-intel-2016b-Python-2.7.12', 'Pillow/3.4.2-intel-2016b-Python-3.5.2', 'Pillow/3.4.2-intel-2016b-Python-3.5.2-freetype-2.6.5', 'PostgreSQL/9.6.0-intel-2016b-Python-2.7.12', 'PyCogent/1.5.3-intel-2016b-Python-2.7.12', 'PyCogent/1.9-intel-2016b-Python-2.7.12', 'PyGTS/0.3.1-intel-2016b-Python-2.7.12', 'PyNAST/1.2.2-intel-2016b-Python-2.7.12', 'PyQt/4.11.4-intel-2016b-Python-2.7.12', 'PyTables/3.3.0-intel-2016b-Python-2.7.12', 'PyTables/3.3.0-intel-2016b-Python-3.5.2', 'PyYAML/3.12-intel-2016b-Python-2.7.12', 'PyYAML/3.12-intel-2016b-Python-3.5.2', 'PyZMQ/15.4.0-intel-2016b-Python-2.7.12-zmq4', 'PyZMQ/15.4.0-intel-2016b-Python-3.5.2-zmq4', 'PyZMQ/16.0.2-foss-2016b-Python-2.7.12-zmq4', 'PyZMQ/16.0.2-foss-2016b-Python-3.5.2-zmq4', 'PyZMQ/16.0.2-intel-2016b-Python-2.7.12-zmq4', 'PyZMQ/16.0.2-intel-2016b-Python-3.5.2-zmq4', 'Pysam/0.9.1.4-foss-2016b-Python-2.7.12', 'Python/2.7.12-foss-2016b', 'Python/2.7.12-intel-2016b', 'Python/3.5.2-foss-2016b', 'Python/3.5.2-intel-2016b', 'Qhull/2015.2-intel-2016b', 'Qt/4.8.7-intel-2016b', 'Qt5/5.7.0-intel-2016b', 'QuantumESPRESSO/5.4.0-foss-2016b-hybrid', 'QuantumESPRESSO/6.0-intel-2016b', 'R-bundle-Bioconductor/3.3-intel-2016b-R-3.3.1', 'R/3.2.3-foss-2016b', 'R/3.3.1-foss-2016b', 'R/3.3.1-intel-2016b', 'RASPA2/2.0.3-intel-2016b-Python-2.7.12', 'RELION/1.4-intel-2016b', 'RELION/1.4-intel-2016b-single', 'RELION/2.0.1-intel-2016b', 'RSEM/1.2.30-intel-2016b', 'RSEM/1.3.0-foss-2016b', 'RSeQC/2.6.4-foss-2016b-Python-2.7.12-R-3.3.1', 'Rosetta/3.7-foss-2016b', 'Ruby/2.3.1-intel-2016b', 'Rust/1.12.0-foss-2016b', 'Rust/1.12.1-foss-2016b', 'SAMtools/0.1.19-foss-2016b', 'SAMtools/1.3.1-intel-2016b', 'SAMtools/1.3.1-intel-2016b-HTSlib-1.3.2', 'SCOOP/0.6.2-intel-2016b-Python-2.7.12', 'SCOTCH/6.0.4-foss-2016b', 'SCOTCH/6.0.4-intel-2016b', 'SCons/2.5.0-foss-2016b-Python-2.7.12', 'SCons/2.5.0-intel-2016b-Python-2.7.12', 'SDL2/2.0.4-intel-2016b', 'SIP/4.18.1-intel-2016b-Python-2.7.12', 'SPAdes/3.9.0-foss-2016b', 'SQLite/3.13.0-foss-2016b', 'SQLite/3.13.0-intel-2016b', 'SQLite/3.15.2-foss-2017a', 'STAMP/1.3-intel-2016b', 'STREAM/5.10-intel-2016b', 'SUNDIALS/2.6.2-intel-2016b', 'SUNDIALS/2.7.0-intel-2016b', 'SWIG/3.0.10-foss-2016b-Python-2.7.12', 'SWIG/3.0.10-intel-2016b-Python-2.7.12', 'SWIG/3.0.10-intel-2016b-Python-2.7.12-PCRE-8.39', 'ScaLAPACK/2.0.2-gompi-2016b-OpenBLAS-0.2.18-LAPACK-3.6.1', 'ScaLAPACK/2.0.2-gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.6.1', 'SimPEG/0.3.1-intel-2016b-Python-2.7.12', 'SimVascular/2.16.0406-intel-2016b', 'SolexaQA++/3.1.5-foss-2016b', 'StringTie/1.3.0-intel-2016b', 'Subread/1.5.0-p1-foss-2016b', 'SuiteSparse/4.5.3-intel-2016b-METIS-5.1.0', 'Szip/2.1-foss-2016b', 'Szip/2.1-intel-2016b', 'Tcl/8.6.5-foss-2016b', 'Tcl/8.6.5-intel-2016b', 'Tcl/8.6.6-foss-2017a', 'Theano/0.8.2-intel-2016b-Python-3.5.2', 'Tk/8.6.5-foss-2016b', 'Tk/8.6.5-intel-2016b', 'Tk/8.6.6-foss-2017a', 'Trim_Galore/0.4.2-foss-2016b', 'UCLUST/1.2.22q-i86linux64', 'UDUNITS/2.2.20-intel-2016b', 'USPEX/9.4.4-intel-2016b-Python-2.7.12', 'VTK/6.3.0-intel-2016b-Python-2.7.12', 'VTK/7.0.0-intel-2016b-Python-2.7.12', 'X11/20160819-foss-2016b', 'X11/20160819-intel-2016b', 'XGBoost/0.6a2-intel-2016b-Python-2.7.12', 'XGBoost/0.6a2-intel-2016b-Python-3.5.2', 'XML-Parser/2.44_01-intel-2016b-Perl-5.24.0', 'XZ/5.2.2-foss-2016b', 'XZ/5.2.2-intel-2016b', 'YAXT/0.5.1-intel-2016b', 'Yade/2016.06a-intel-2016b-Python-2.7.12', 'Yasm/1.3.0-intel-2016b', 'ZeroMQ/4.1.5-intel-2016b', 'ZeroMQ/4.2.0-foss-2016b', 'ZeroMQ/4.2.0-intel-2016b', 'ant/1.9.7-Java-1.8.0_92', 'argtable/2.13-foss-2016b', 'arpack-ng/3.4.0-intel-2016b', 'atools/1.4.2-intel-2016b-Python-2.7.12', 'awscli/1.11.1-intel-2016b-Python-2.7.12', 'behave/1.2.5-foss-2016b-Python-2.7.12', 'binutils/2.26', 'binutils/2.26-GCCcore-5.4.0', 'binutils/2.27', 'binutils/2.27-GCCcore-6.3.0', 'bokeh/0.12.3-intel-2016b-Python-2.7.12', 'bokeh/0.12.3-intel-2016b-Python-3.5.2', 'byacc/20160606-intel-2016b', 'bzip2/1.0.6-foss-2016b', 'bzip2/1.0.6-foss-2017a', 'bzip2/1.0.6-intel-2016b', 'cURL/7.49.1-foss-2016b', 'cURL/7.49.1-intel-2016b', 'cairo/1.14.6-intel-2016b', 'cluster/.banette', 'cluster/.defaultcluster', 'cluster/.metapod', 'cluster/.shuppet', 'cluster/delcatty', 'cluster/golett', 'cluster/phanpy', 'cluster/raichu', 'cluster/swalot', 'configparser/3.5.0-intel-2016b-Python-2.7.12', 'configparser/3.5.0-intel-2016b-Python-3.5.2', 'cutadapt/1.9.1-foss-2016b-Python-2.7.12', 'dadi/1.7.0-intel-2016b-Python-2.7.12', 'dask/0.11.0-intel-2016b-Python-2.7.12', 'dask/0.11.0-intel-2016b-Python-3.5.2', 'dask/0.12.0-intel-2016b-Python-2.7.12', 'dask/0.12.0-intel-2016b-Python-3.5.2', 'dbus-glib/0.108-intel-2016b', 'distributed/1.14.3-intel-2016b-Python-2.7.12', 'distributed/1.14.3-intel-2016b-Python-3.5.2', 'ea-utils/27a4809-foss-2016b', 'entrypoints/0.2.2-intel-2016b-Python-2.7.12', 'entrypoints/0.2.2-intel-2016b-Python-3.5.2', 'expat/2.2.0-foss-2016b', 'expat/2.2.0-intel-2016b', 'file/5.28-foss-2016b', 'flex/2.5.39-intel-2016b', 'flex/2.6.0', 'flex/2.6.0-GCCcore-5.4.0', 'flex/2.6.0-foss-2016b', 'flex/2.6.0-intel-2016b', 'flex/2.6.2-GCCcore-6.3.0', 'flex/2.6.2-intel-2016b', 'flex/2.6.3-GCCcore-6.3.0', 'fontconfig/2.12.1-foss-2016b', 'fontconfig/2.12.1-intel-2016b', 'foss/2016b', 'foss/2017a', 'freeglut/3.0.0-intel-2016b', 'freetype/2.6.5-foss-2016b', 'freetype/2.6.5-intel-2016b', 'freetype/2.7-foss-2016b', 'freetype/2.7-intel-2016b', 'gdc-client/1.0.1-intel-2016b-Python-2.7.12', 'gettext/0.19.8', 'gettext/0.19.8-foss-2016b', 'gettext/0.19.8-intel-2016b', 'gnuplot/5.0.5-intel-2016b', 'gompi/2016b', 'gompi/2017a', 'gperf/3.0.4-intel-2016b', 'gperftools/2.5-intel-2016b', 'graphviz/0.5.1-intel-2016b-Python-2.7.12', 'graphviz/0.5.1-intel-2016b-Python-3.5.2', 'h5py/2.6.0-foss-2016b-Python-2.7.12-HDF5-1.10.0-patch1', 'h5py/2.6.0-foss-2016b-Python-2.7.12-HDF5-1.8.17', 'h5py/2.6.0-foss-2016b-Python-2.7.12-HDF5-1.8.18', 'h5py/2.6.0-foss-2016b-Python-3.5.2-HDF5-1.10.0-patch1', 'h5py/2.6.0-foss-2016b-Python-3.5.2-HDF5-1.8.18', 'h5py/2.6.0-intel-2016b-Python-2.7.12-HDF5-1.10.0-patch1', 'h5py/2.6.0-intel-2016b-Python-2.7.12-HDF5-1.8.17', 'h5py/2.6.0-intel-2016b-Python-2.7.12-HDF5-1.8.18', 'h5py/2.6.0-intel-2016b-Python-3.5.2-HDF5-1.10.0-patch1', 'h5py/2.6.0-intel-2016b-Python-3.5.2-HDF5-1.8.17', 'h5py/2.6.0-intel-2016b-Python-3.5.2-HDF5-1.8.18', 'hanythingondemand/3.1.3-intel-2016b-Python-2.7.12', 'hanythingondemand/3.1.4-intel-2016b-Python-2.7.12', 'hanythingondemand/3.2.0-intel-2016b-Python-2.7.12', 'help2man/1.47.4-GCCcore-6.3.0', 'help2man/1.47.4-intel-2016b', 'hwloc/1.11.3-GCC-5.4.0-2.26', 'hwloc/1.11.3-intel-2016b', 'hwloc/1.11.5-GCC-6.3.0-2.27', 'icc/2016.3.210-GCC-5.4.0-2.26', 'icc/2017.1.132-GCC-6.3.0-2.27', 'iccifort/2016.3.210-GCC-5.4.0-2.26', 'iccifort/2017.1.132-GCC-6.3.0-2.27', 'ifort/2016.3.210-GCC-5.4.0-2.26', 'ifort/2017.1.132-GCC-6.3.0-2.27', 'iimpi/2016b', 'iimpi/2017a', 'imkl/11.3.3.210-iimpi-2016b', 'imkl/2017.1.132-iimpi-2017a', 'impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27', 'impi/5.1.3.181-iccifort-2016.3.210-GCC-5.4.0-2.26', 'intel/2016b', 'intel/2017a', 'intltool/0.51.0-intel-2016b-Perl-5.24.0', 'jemalloc/4.2.1-intel-2016b', 'kallisto/0.43.0-intel-2016b', 'khmer/1.4.1-foss-2016b-Python-2.7.12', 'libGLU/9.0.0-foss-2016b', 'libGLU/9.0.0-intel-2016b', 'libQGLViewer/2.6.3-intel-2016b', 'libcerf/1.5-intel-2016b', 'libdrm/2.4.70-foss-2016b', 'libdrm/2.4.70-intel-2016b', 'libffi/3.2.1-foss-2016b', 'libffi/3.2.1-foss-2017a', 'libffi/3.2.1-intel-2016b', 'libgd/2.2.3-intel-2016b', 'libgtextutils/0.7-foss-2016b', 'libidn/1.32-foss-2016b', 'libjpeg-turbo/1.4.2-foss-2016b', 'libjpeg-turbo/1.5.0-foss-2016b', 'libjpeg-turbo/1.5.0-intel-2016b', 'libjpeg-turbo/1.5.1-intel-2016b', 'libmatheval/1.1.11-intel-2016b', 'libpng/1.6.23-foss-2016b', 'libpng/1.6.23-intel-2016b', 'libpng/1.6.24-foss-2016b', 'libpng/1.6.24-intel-2016b', 'libpng/1.6.26-foss-2016b', 'libpng/1.6.26-intel-2016b', 'libreadline/6.3-foss-2016b', 'libreadline/6.3-intel-2016b', 'libreadline/7.0-foss-2017a', 'libsodium/1.0.11-foss-2016b', 'libsodium/1.0.11-intel-2016b', 'libtool/2.4.6-foss-2016b', 'libtool/2.4.6-foss-2017a', 'libtool/2.4.6-intel-2016b', 'libunistring/0.9.6-intel-2016b', 'libunwind/1.1-intel-2016b', 'libxc/2.2.3-intel-2016b', 'libxc/3.0.0-intel-2016b', 'libxml2/2.9.4-foss-2016b', 'libxml2/2.9.4-foss-2016b-Python-2.7.12', 'libxml2/2.9.4-intel-2016b', 'libxml2/2.9.4-intel-2016b-Python-2.7.12', 'libxslt/1.1.29-intel-2016b', 'libxsmm/1.4.4-intel-2016b', 'libyaml/0.1.6-intel-2016b', 'lxml/3.6.4-intel-2016b-Python-2.7.12', 'matplotlib/1.5.1-intel-2016b-Python-2.7.12', 'matplotlib/1.5.1-intel-2016b-Python-3.5.2', 'matplotlib/1.5.2-intel-2016b-Python-2.7.12', 'matplotlib/1.5.2-intel-2016b-Python-3.5.2', 'matplotlib/1.5.3-foss-2016b-Python-2.7.12', 'matplotlib/1.5.3-intel-2016b-Python-2.7.12', 'matplotlib/1.5.3-intel-2016b-Python-3.5.2', 'minieigen/0.5.3-intel-2016b-Python-2.7.12', 'mpi4py/1.3.1-intel-2016b-Python-2.7.12-timed-pingpong', 'mpi4py/2.0.0-intel-2016b-Python-2.7.12', 'mympingpong/0.7.1-intel-2016b-Python-2.7.12', 'mypy/0.4.5-intel-2016b', 'ncbi-vdb/2.5.8-1-foss-2016b', 'ncbi-vdb/2.7.0-foss-2016b', 'ncurses/6.0', 'ncurses/6.0-foss-2016b', 'ncurses/6.0-foss-2017a', 'ncurses/6.0-intel-2016b', 'ncview/2.1.7-intel-2016b', 'netCDF-C++4/4.3.0-intel-2016b', 'netCDF-Fortran/4.4.4-foss-2016b', 'netCDF-Fortran/4.4.4-intel-2016b', 'netCDF/4.4.1-foss-2016b', 'netCDF/4.4.1-intel-2016b', 'netCDF/4.4.1.1-foss-2016b', 'nettle/3.2-foss-2016b', 'nettle/3.2-intel-2016b', 'nose-parameterized/0.5.0-intel-2016b-Python-3.5.2', 'numactl/2.0.11-GCC-5.4.0-2.26', 'numactl/2.0.11-GCC-6.3.0-2.27', 'numactl/2.0.11-intel-2016b', 'numexpr/2.6.1-intel-2016b-Python-2.7.12', 'numexpr/2.6.1-intel-2016b-Python-3.5.2', 'numpy/1.9.2-intel-2016b-Python-2.7.12', 'pandas/0.18.1-intel-2016b-Python-2.7.12', 'pandas/0.18.1-intel-2016b-Python-3.5.2', 'pandas/0.19.0-foss-2016b-Python-2.7.12', 'pandas/0.19.0-foss-2016b-Python-3.5.2', 'pandas/0.19.0-intel-2016b-Python-2.7.12', 'pandas/0.19.0-intel-2016b-Python-3.5.2', 'pandas/0.19.1-intel-2016b-Python-2.7.12', 'pandas/0.19.1-intel-2016b-Python-3.5.2', 'path.py/8.2.1-intel-2016b-Python-2.7.12', 'path.py/8.2.1-intel-2016b-Python-3.5.2', 'pbs_python/4.6.0-intel-2016b-Python-2.7.12', 'pip/8.1.2-intel-2016b-Python-2.7.12', 'pixman/0.34.0-intel-2016b', 'pkg-config/0.29.1-foss-2016b', 'pkg-config/0.29.1-intel-2016b', 'pkgconfig/1.1.0-foss-2016b-Python-2.7.12', 'pkgconfig/1.1.0-foss-2016b-Python-3.5.2', 'pkgconfig/1.1.0-intel-2016b-Python-2.7.12', 'pkgconfig/1.1.0-intel-2016b-Python-3.5.2', 'prokka/1.11-foss-2016b-BioPerl-1.7.0', 'prompt-toolkit/1.0.6-intel-2016b-Python-2.7.12', 'prompt-toolkit/1.0.6-intel-2016b-Python-3.5.2', 'pymatgen/4.1.1-intel-2016b-Python-2.7.12', 'pymatgen/4.3.2-intel-2016b-Python-2.7.12', 'qrupdate/1.1.2-intel-2016b', 'requests/2.11.1-intel-2016b-Python-2.7.12', 'requests/2.11.1-intel-2016b-Python-3.5.2', 'scikit-image/0.12.3-intel-2016b-Python-2.7.12', 'scikit-image/0.12.3-intel-2016b-Python-3.5.2', 'scikit-learn/0.17.1-intel-2016b-Python-2.7.12', 'scikit-learn/0.18-intel-2016b-Python-2.7.12', 'scikit-learn/0.18-intel-2016b-Python-3.5.2', 'scipy/0.16.0-intel-2016b-Python-2.7.12', 'seqtk/1.2-foss-2016b', 'setuptools/1.4.2', 'spglib-python/1.9.4.2-intel-2016b-Python-2.7.12', 'spglib-python/1.9.5-intel-2016b-Python-2.7.12', 'tabix/0.2.6-intel-2016b', 'taco/0.5.1-intel-2016b-Python-2.7.12', 'testpath/0.3-intel-2016b-Python-2.7.12', 'testpath/0.3-intel-2016b-Python-3.5.2', 'util-linux/2.28.1-intel-2016b', 'util-linux/2.29-foss-2016b', 'util-linux/2.29-intel-2016b', 'vsc-base/2.5.1-intel-2016b-Python-2.7.12', 'vsc-install/0.10.11-intel-2016b-Python-2.7.12', 'vsc-mympirun/3.4.3-intel-2016b-Python-2.7.12', 'wcwidth/0.1.7-intel-2016b-Python-2.7.12', 'wcwidth/0.1.7-intel-2016b-Python-3.5.2', 'wget/1.17.1-foss-2016b', 'worker/1.6.6-intel-2016b', 'worker/1.6.7-intel-2016b', 'wxPython/3.0.2.0-intel-2016b-Python-2.7.12', 'x264/20160614-intel-2016b', 'xprop/1.2.2-foss-2016b', 'xprop/1.2.2-intel-2016b', 'zlib/1.2.10', 'zlib/1.2.10-GCCcore-6.3.0', 'zlib/1.2.8', 'zlib/1.2.8-GCCcore-5.4.0', 'zlib/1.2.8-GCCcore-6.3.0', 'zlib/1.2.8-foss-2016b', 'zlib/1.2.8-intel-2016b'] | |
== 2017-01-04 15:11:32,671 toolchain.py:392 DEBUG add_dependencies: MODULEPATH: /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc | |
== 2017-01-04 15:11:32,672 toolchain.py:395 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'GCCcore/6.3.0', 'toolchain': {'version': '', 'name': 'dummy'}, 'name': 'GCCcore', 'dummy': True, 'short_mod_name': 'GCCcore/6.3.0', 'external_module': False, 'versionsuffix': '', 'version': '6.3.0', 'toolchain_inherited': True, 'hidden': False, 'build_only': False} | |
== 2017-01-04 15:11:32,672 toolchain.py:392 DEBUG add_dependencies: MODULEPATH: /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc | |
== 2017-01-04 15:11:32,672 toolchain.py:395 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'binutils/2.27-GCCcore-6.3.0', 'toolchain': {'version': '6.3.0', 'name': 'GCCcore'}, 'name': 'binutils', 'dummy': False, 'short_mod_name': 'binutils/2.27-GCCcore-6.3.0', 'external_module': False, 'versionsuffix': '', 'version': '2.27', 'toolchain_inherited': False, 'hidden': False, 'build_only': False} | |
== 2017-01-04 15:11:32,672 easyconfig.py:608 DEBUG Dependencies BEFORE filtering: [{'external_module_metadata': {}, 'full_mod_name': 'GCCcore/6.3.0', 'toolchain': {'version': '', 'name': 'dummy'}, 'name': 'GCCcore', 'dummy': True, 'short_mod_name': 'GCCcore/6.3.0', 'external_module': False, 'versionsuffix': '', 'version': '6.3.0', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'binutils/2.27-GCCcore-6.3.0', 'toolchain': {'version': '6.3.0', 'name': 'GCCcore'}, 'name': 'binutils', 'dummy': False, 'short_mod_name': 'binutils/2.27-GCCcore-6.3.0', 'external_module': False, 'versionsuffix': '', 'version': '2.27', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}] | |
== 2017-01-04 15:11:32,672 easyblock.py:1437 INFO Removing existing module file /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all/GCC/6.3.0-2.27.lua | |
== 2017-01-04 15:11:32,675 easyblock.py:2274 INFO Running method make_builddir part of step ready | |
== 2017-01-04 15:11:32,675 easyblock.py:763 DEBUG Creating the build directory /tmp/vsc40023/easybuild_build/GCC/6.3.0/dummy--2.27 (cleanup: True) | |
== 2017-01-04 15:11:32,675 filetools.py:967 INFO Creating directory /tmp/vsc40023/easybuild_build/GCC/6.3.0/dummy--2.27 (parents: True, set_gid: False, sticky: False) | |
== 2017-01-04 15:11:32,676 easyblock.py:2274 INFO Running method env_reset_changes part of step ready | |
== 2017-01-04 15:11:32,676 easyblock.py:2274 INFO Running method handle_iterate_opts part of step ready | |
== 2017-01-04 15:11:32,676 easyblock.py:2263 DEBUG Not skipping source step (skippable: True, skip: None, skipsteps: [], module_only: False, force: True | |
== 2017-01-04 15:11:32,676 build_log.py:216 INFO unpacking... | |
== 2017-01-04 15:11:32,676 easyblock.py:2271 INFO Starting source step | |
== 2017-01-04 15:11:32,676 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,677 templates.py:175 DEBUG version found in easyconfig is 6.3.0 | |
== 2017-01-04 15:11:32,677 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 15:11:32,677 templates.py:219 DEBUG name: name, config: GCC | |
== 2017-01-04 15:11:32,677 templates.py:219 DEBUG name: version, config: 6.3.0 | |
== 2017-01-04 15:11:32,677 templates.py:219 DEBUG name: versionsuffix, config: -2.27 | |
== 2017-01-04 15:11:32,677 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 15:11:32,677 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,678 templates.py:175 DEBUG version found in easyconfig is 6.3.0 | |
== 2017-01-04 15:11:32,678 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 15:11:32,678 templates.py:219 DEBUG name: name, config: GCC | |
== 2017-01-04 15:11:32,678 templates.py:219 DEBUG name: version, config: 6.3.0 | |
== 2017-01-04 15:11:32,678 templates.py:219 DEBUG name: versionsuffix, config: -2.27 | |
== 2017-01-04 15:11:32,678 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 15:11:32,678 easyblock.py:2274 INFO Running method checksum_step part of step source | |
== 2017-01-04 15:11:32,678 easyblock.py:2274 INFO Running method extract_step part of step source | |
== 2017-01-04 15:11:32,679 easyblock.py:2263 DEBUG Not skipping patch step (skippable: True, skip: None, skipsteps: [], module_only: False, force: True | |
== 2017-01-04 15:11:32,679 build_log.py:216 INFO patching... | |
== 2017-01-04 15:11:32,679 easyblock.py:2271 INFO Starting patch step | |
== 2017-01-04 15:11:32,679 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,679 templates.py:175 DEBUG version found in easyconfig is 6.3.0 | |
== 2017-01-04 15:11:32,679 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 15:11:32,679 templates.py:219 DEBUG name: name, config: GCC | |
== 2017-01-04 15:11:32,680 templates.py:219 DEBUG name: version, config: 6.3.0 | |
== 2017-01-04 15:11:32,680 templates.py:219 DEBUG name: versionsuffix, config: -2.27 | |
== 2017-01-04 15:11:32,680 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 15:11:32,680 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,680 templates.py:175 DEBUG version found in easyconfig is 6.3.0 | |
== 2017-01-04 15:11:32,680 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 15:11:32,680 templates.py:219 DEBUG name: name, config: GCC | |
== 2017-01-04 15:11:32,680 templates.py:219 DEBUG name: version, config: 6.3.0 | |
== 2017-01-04 15:11:32,681 templates.py:219 DEBUG name: versionsuffix, config: -2.27 | |
== 2017-01-04 15:11:32,681 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 15:11:32,681 easyblock.py:2274 INFO Running method patch_step part of step patch | |
== 2017-01-04 15:11:32,681 easyblock.py:2263 DEBUG Not skipping prepare step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True | |
== 2017-01-04 15:11:32,681 build_log.py:216 INFO preparing... | |
== 2017-01-04 15:11:32,681 easyblock.py:2271 INFO Starting prepare step | |
== 2017-01-04 15:11:32,681 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,682 templates.py:175 DEBUG version found in easyconfig is 6.3.0 | |
== 2017-01-04 15:11:32,682 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 15:11:32,682 templates.py:219 DEBUG name: name, config: GCC | |
== 2017-01-04 15:11:32,682 templates.py:219 DEBUG name: version, config: 6.3.0 | |
== 2017-01-04 15:11:32,682 templates.py:219 DEBUG name: versionsuffix, config: -2.27 | |
== 2017-01-04 15:11:32,682 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 15:11:32,682 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x1327ad0> | |
== 2017-01-04 15:11:32,683 templates.py:175 DEBUG version found in easyconfig is 6.3.0 | |
== 2017-01-04 15:11:32,683 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 15:11:32,683 templates.py:219 DEBUG name: name, config: GCC | |
== 2017-01-04 15:11:32,683 templates.py:219 DEBUG name: version, config: 6.3.0 | |
== 2017-01-04 15:11:32,683 templates.py:219 DEBUG name: versionsuffix, config: -2.27 | |
== 2017-01-04 15:11:32,683 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 15:11:32,683 easyblock.py:2274 INFO Running method prepare_step part of step prepare | |
== 2017-01-04 15:11:32,683 toolchain.py:322 DEBUG _toolchain_exists: dummy toolchain always exists, returning True | |
== 2017-01-04 15:11:32,684 toolchain.py:557 INFO prepare: toolchain dummy mode and loading dependencies | |
== 2017-01-04 15:11:32,684 toolchain.py:523 DEBUG Loading modules for dependencies: ['GCCcore/6.3.0', 'binutils/2.27-GCCcore-6.3.0'] | |
== 2017-01-04 15:11:32,684 modules.py:634 DEBUG Current MODULEPATH: /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc | |
== 2017-01-04 15:11:32,684 modules.py:641 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command | |
== 2017-01-04 15:11:32,684 modules.py:641 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command | |
== 2017-01-04 15:11:32,684 modules.py:645 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python load GCCcore/6.3.0' from /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023/2017a | |
== 2017-01-04 15:11:32,823 modules.py:651 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python load GCCcore/6.3.0': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["CPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/include"; | |
os.environ["EBDEVELGCCCORE"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/easybuild/GCCcore-6.3.0-easybuild-devel"; | |
os.environ["EBROOTGCCCORE"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0"; | |
os.environ["EBVERSIONGCCCORE"] = "6.3.0"; | |
os.environ["LD_LIBRARY_PATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib"; | |
os.environ["LIBRARY_PATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib"; | |
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["LOADEDMODULES"] = "cluster/golett:GCCcore/6.3.0"; | |
os.environ["MANPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/share/man::"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["PATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/bin:/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/bin:/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin"; | |
os.environ["_LMFILES_"] = "/etc/modulefiles/vsc/cluster/golett.lua:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all/GCCcore/6.3.0.lua"; | |
os.environ["_ModuleTable001_"] = "X01vZHVsZVRhYmxlXz17WyJhY3RpdmVTaXplIl09MixiYXNlTXBhdGhBPXsiL3VzZXIvaG9tZS9nZW50L3ZzYzQwMC92c2M0MDAyMy9lYl9waGFucHlzY3JhdGNoL0NPNy9oYXN3ZWxsLWliL21vZHVsZXMvYWxsIiwiL2V0Yy9tb2R1bGVmaWxlcy92c2MiLH0sWyJjX3JlYnVpbGRUaW1lIl09ODY0MDAsWyJjX3Nob3J0VGltZSJdPWZhbHNlLGZhbWlseT17WyJjbHVzdGVyIl09ImNsdXN0ZXIiLH0saW5hY3RpdmU9e30sbVQ9e0dDQ2NvcmU9e1siRk4iXT0iL3VzZXIvaG9tZS9nZW50L3ZzYzQwMC92c2M0MDAyMy9lYl9waGFucHlzY3JhdGNoL0NPNy9oYXN3ZWxsLWliL21vZHVsZXMvYWxsL0dDQ2NvcmUvNi4zLjAubHVhIixbImRlZmF1bHQiXT0wLFsiZnVsbE5hbWUiXT0iR0ND"; | |
os.environ["_ModuleTable002_"] = "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"; | |
os.environ["_ModuleTable003_"] = "c3lzdGVtQmFzZU1QQVRIIl09Ii9ldGMvbW9kdWxlZmlsZXMvdnNjIixbInZlcnNpb24iXT0yLH0="; | |
os.environ["_ModuleTable_Sz_"] = "3"; | |
; stderr: | |
== 2017-01-04 15:11:32,842 modules.py:968 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python load GCCcore/6.3.0' ran fine | |
== 2017-01-04 15:11:32,843 modules.py:682 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib64', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib'] to ['/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib64', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib'] | |
== 2017-01-04 15:11:32,843 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib (previous value: '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib') | |
== 2017-01-04 15:11:32,843 modules.py:682 DEBUG Correcting paths in $LD_PRELOAD from [''] to [] | |
== 2017-01-04 15:11:32,843 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
== 2017-01-04 15:11:32,844 modules.py:634 DEBUG Current MODULEPATH: /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc | |
== 2017-01-04 15:11:32,844 modules.py:641 DEBUG Changing LD_LIBRARY_PATH from '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib/gcc/x86_64-pc-linux-gnu/6.3.0:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GCCcore/6.3.0/lib' to '' in environment for module command | |
== 2017-01-04 15:11:32,844 modules.py:641 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command | |
== 2017-01-04 15:11:32,844 modules.py:645 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python load binutils/2.27-GCCcore-6.3.0' from /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023/2017a | |
== 2017-01-04 15:11:35,400 modules.py:651 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python load binutils/2.27-GCCcore-6.3.0': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
false | |
; stderr: Lmod has detected the following error: The following module(s) are unknown: | |
"binutils/2.27-GCCcore-6.3.0" | |
Please check the spelling or version number. Also try "module spider ..." | |
If you don't understand the warning or error, contact the helpdesk at hpc@ugent.be | |
== 2017-01-04 15:11:35,400 modules.py:968 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python load binutils/2.27-GCCcore-6.3.0' ran fine | |
== 2017-01-04 15:11:35,402 build_log.py:147 ERROR EasyBuild crashed with an error (at ?:124 in __init__): Changing environment as dictated by module failed: name 'false' is not defined (stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
false | |
, stderr: Lmod has detected the following error: The following module(s) are unknown: | |
"binutils/2.27-GCCcore-6.3.0" | |
Please check the spelling or version number. Also try "module spider ..." | |
If you don't understand the warning or error, contact the helpdesk at hpc@ugent.be | |
) (at easybuild/tools/modules.py:674 in run_module) | |
== 2017-01-04 15:11:35,402 easyblock.py:2503 WARNING build failed (first 300 chars): Changing environment as dictated by module failed: name 'false' is not defined (stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscr | |
== 2017-01-04 15:11:35,402 easyblock.py:276 INFO Closing log for application name GCC version 6.3.0 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment