Created
January 4, 2017 16:14
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(partial) EasyBuild log for failed build of /tmp/eb-B3gTBZ/files_pr3968/o/OpenBLAS/OpenBLAS-0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0.eb (PR #3968)
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== 2017-01-04 17:13:55,948 easyblock.py:261 INFO This is EasyBuild 3.0.2 (framework: 3.0.2, easyblocks: 3.0.2) on host node2519.golett.os. | |
== 2017-01-04 17:13:55,948 easyblock.py:267 INFO This is easyblock ConfigureMake from module easybuild.easyblocks.generic.configuremake (/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyblocks/generic/configuremake.pyo) | |
== 2017-01-04 17:13:55,948 easyblock.py:753 INFO Build dir set to /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0 | |
== 2017-01-04 17:13:55,949 config.py:423 DEBUG software install path as specified by 'installpath' and 'subdir_software': /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software | |
== 2017-01-04 17:13:55,949 easyconfig.py:1650 DEBUG Determining software installation subdir for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:55,949 easyconfig.py:1656 DEBUG Obtained subdir OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0 | |
== 2017-01-04 17:13:55,949 easyblock.py:792 INFO Software install dir set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0 | |
== 2017-01-04 17:13:55,949 config.py:423 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules | |
== 2017-01-04 17:13:55,949 easyblock.py:797 INFO Module install dir set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all | |
== 2017-01-04 17:13:55,949 easyblock.py:246 INFO Init completed for application name OpenBLAS version 0.2.19 | |
== 2017-01-04 17:13:55,950 easyblock.py:2477 INFO Obtained application instance of for OpenBLAS (easyblock: ConfigureMake) | |
== 2017-01-04 17:13:55,950 easyblock.py:2490 DEBUG Skip set to False | |
== 2017-01-04 17:13:55,950 easyconfig.py:1208 WARNING Unable to resolve template value USE_THREAD=1 PREFIX=%(installdir)s with dict {'nameletterlower': 'o', 'versionsuffix': '-LAPACK-3.7.0', 'toolchain_name': 'GCC', 'namelower': 'openblas', 'version_minor': '2', 'name': 'OpenBLAS', 'versionprefix': '', 'version_major': '0', 'nameletter': 'O', 'version_major_minor': '0.2', 'version': '0.2.19', 'toolchain_version': '6.3.0-2.27'} | |
== 2017-01-04 17:13:55,950 build_log.py:216 INFO building and installing OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0... | |
== 2017-01-04 17:13:55,950 easyblock.py:2263 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: ['configure'], module_only: False, force: True | |
== 2017-01-04 17:13:55,950 build_log.py:216 INFO fetching files... | |
== 2017-01-04 17:13:55,950 easyblock.py:2271 INFO Starting fetch step | |
== 2017-01-04 17:13:55,951 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:55,951 templates.py:175 DEBUG version found in easyconfig is 0.2.19 | |
== 2017-01-04 17:13:55,951 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 17:13:55,951 templates.py:219 DEBUG name: name, config: OpenBLAS | |
== 2017-01-04 17:13:55,951 templates.py:219 DEBUG name: version, config: 0.2.19 | |
== 2017-01-04 17:13:55,951 templates.py:219 DEBUG name: versionsuffix, config: -LAPACK-3.7.0 | |
== 2017-01-04 17:13:55,951 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 17:13:55,951 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:55,952 templates.py:175 DEBUG version found in easyconfig is 0.2.19 | |
== 2017-01-04 17:13:55,952 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 17:13:55,952 templates.py:219 DEBUG name: name, config: OpenBLAS | |
== 2017-01-04 17:13:55,952 templates.py:219 DEBUG name: version, config: 0.2.19 | |
== 2017-01-04 17:13:55,952 templates.py:219 DEBUG name: versionsuffix, config: -LAPACK-3.7.0 | |
== 2017-01-04 17:13:55,952 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 17:13:55,952 easyblock.py:2274 INFO Running method fetch_step part of step fetch | |
== 2017-01-04 17:13:55,952 easyblock.py:1446 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
== 2017-01-04 17:13:55,953 filetools.py:237 INFO Command eb found at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
== 2017-01-04 17:13:55,953 tools.py:261 DEBUG Also considering installation prefix /user/data/gent/vsc400/vsc40023/easybuild_easy_installed... | |
== 2017-01-04 17:13:55,953 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,953 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-B3gTBZ/files_pr3968/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,953 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,953 tools.py:266 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs | |
== 2017-01-04 17:13:55,953 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_base-2.5.5-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,954 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_install-0.10.20-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,954 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_framework-3.0.2.dev0-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,954 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,954 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,954 tools.py:270 DEBUG Added /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2017-01-04 17:13:55,954 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/MySQLdb/1.2.5-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/MySQL_python-1.2.5-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,954 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/psutil/3.4.2-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/psutil-3.4.2-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,954 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.7/site-packages/keyring-3.8/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,955 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,955 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,955 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,955 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,955 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,955 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,955 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,955 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,956 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,956 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,956 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/pbs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,956 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,956 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,956 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,962 easyblock.py:590 INFO Found file v0.2.19.tar.gz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/v0.2.19.tar.gz | |
== 2017-01-04 17:13:55,962 easyblock.py:338 DEBUG File /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/v0.2.19.tar.gz found for source v0.2.19.tar.gz | |
== 2017-01-04 17:13:55,962 filetools.py:237 INFO Command eb found at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
== 2017-01-04 17:13:55,962 tools.py:261 DEBUG Also considering installation prefix /user/data/gent/vsc400/vsc40023/easybuild_easy_installed... | |
== 2017-01-04 17:13:55,962 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,962 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-B3gTBZ/files_pr3968/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,963 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,963 tools.py:266 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs | |
== 2017-01-04 17:13:55,963 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_base-2.5.5-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,963 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_install-0.10.20-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,963 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_framework-3.0.2.dev0-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,963 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,963 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,963 tools.py:270 DEBUG Added /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2017-01-04 17:13:55,964 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/MySQLdb/1.2.5-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/MySQL_python-1.2.5-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,964 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/psutil/3.4.2-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/psutil-3.4.2-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,964 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.7/site-packages/keyring-3.8/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,964 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,964 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,964 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,964 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,964 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,965 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,965 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,965 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,965 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,965 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,965 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/pbs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,965 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,965 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,966 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,967 easyblock.py:590 INFO Found file lapack-3.7.0.tgz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/lapack-3.7.0.tgz | |
== 2017-01-04 17:13:55,967 easyblock.py:338 DEBUG File /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/lapack-3.7.0.tgz found for source lapack-3.7.0.tgz | |
== 2017-01-04 17:13:55,967 filetools.py:237 INFO Command eb found at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
== 2017-01-04 17:13:55,967 tools.py:261 DEBUG Also considering installation prefix /user/data/gent/vsc400/vsc40023/easybuild_easy_installed... | |
== 2017-01-04 17:13:55,967 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,967 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-B3gTBZ/files_pr3968/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,967 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,968 tools.py:266 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs | |
== 2017-01-04 17:13:55,968 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_base-2.5.5-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,968 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_install-0.10.20-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,968 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_framework-3.0.2.dev0-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,968 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,968 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,968 tools.py:270 DEBUG Added /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2017-01-04 17:13:55,968 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/MySQLdb/1.2.5-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/MySQL_python-1.2.5-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,969 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/psutil/3.4.2-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/psutil-3.4.2-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,969 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.7/site-packages/keyring-3.8/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,969 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,969 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,969 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,969 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,969 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,969 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,970 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,970 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,970 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,970 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,970 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/pbs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,970 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,970 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,970 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,971 easyblock.py:590 INFO Found file large.tgz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz | |
== 2017-01-04 17:13:55,971 easyblock.py:338 DEBUG File /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz found for source large.tgz | |
== 2017-01-04 17:13:55,971 filetools.py:237 INFO Command eb found at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
== 2017-01-04 17:13:55,971 tools.py:261 DEBUG Also considering installation prefix /user/data/gent/vsc400/vsc40023/easybuild_easy_installed... | |
== 2017-01-04 17:13:55,972 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,972 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-B3gTBZ/files_pr3968/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,972 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,972 tools.py:266 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs | |
== 2017-01-04 17:13:55,972 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_base-2.5.5-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,972 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_install-0.10.20-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,972 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_framework-3.0.2.dev0-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,972 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,973 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,973 tools.py:270 DEBUG Added /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2017-01-04 17:13:55,973 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/MySQLdb/1.2.5-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/MySQL_python-1.2.5-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,973 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/psutil/3.4.2-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/psutil-3.4.2-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,973 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.7/site-packages/keyring-3.8/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,973 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,973 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,974 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,974 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,974 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,974 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,974 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,974 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,974 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,974 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,974 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/pbs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,975 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,975 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,975 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,976 easyblock.py:590 INFO Found file timing.tgz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz | |
== 2017-01-04 17:13:55,976 easyblock.py:338 DEBUG File /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz found for source timing.tgz | |
== 2017-01-04 17:13:55,976 easyblock.py:350 INFO Added sources: [{'path': '/user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/v0.2.19.tar.gz', 'cmd': None, 'finalpath': '/tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0', 'name': 'v0.2.19.tar.gz', 'checksum': None}, {'path': '/user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/lapack-3.7.0.tgz', 'cmd': 'cd OpenBLAS-0.2.19; rm -rf lapack-netlib;mkdir lapack-netlib;tar -C lapack-netlib --strip-components=1 -zxf %s; cd -', 'finalpath': '/tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0', 'name': 'lapack-3.7.0.tgz', 'checksum': None}, {'path': '/user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz', 'cmd': None, 'finalpath': '/tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0', 'name': 'large.tgz', 'checksum': None}, {'path': '/user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz', 'cmd': None, 'finalpath': '/tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0', 'name': 'timing.tgz', 'checksum': None}] | |
== 2017-01-04 17:13:55,977 filetools.py:237 INFO Command eb found at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
== 2017-01-04 17:13:55,977 tools.py:261 DEBUG Also considering installation prefix /user/data/gent/vsc400/vsc40023/easybuild_easy_installed... | |
== 2017-01-04 17:13:55,977 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,977 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-B3gTBZ/files_pr3968/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,977 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,977 tools.py:266 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs | |
== 2017-01-04 17:13:55,977 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_base-2.5.5-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,977 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_install-0.10.20-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,978 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_framework-3.0.2.dev0-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,978 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,978 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,978 tools.py:270 DEBUG Added /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2017-01-04 17:13:55,978 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/MySQLdb/1.2.5-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/MySQL_python-1.2.5-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,978 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/psutil/3.4.2-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/psutil-3.4.2-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,978 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.7/site-packages/keyring-3.8/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,978 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,979 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,979 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,979 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,979 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,979 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,979 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,979 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,979 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,980 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,980 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/pbs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,980 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,980 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,980 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,980 easyblock.py:590 INFO Found file large.tgz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz | |
== 2017-01-04 17:13:55,981 easyblock.py:390 DEBUG File /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz found for patch ('large.tgz', '.') | |
== 2017-01-04 17:13:55,981 filetools.py:237 INFO Command eb found at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
== 2017-01-04 17:13:55,981 tools.py:261 DEBUG Also considering installation prefix /user/data/gent/vsc400/vsc40023/easybuild_easy_installed... | |
== 2017-01-04 17:13:55,981 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,981 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-B3gTBZ/files_pr3968/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,981 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,981 tools.py:266 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs | |
== 2017-01-04 17:13:55,981 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_base-2.5.5-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,982 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_install-0.10.20-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,982 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_framework-3.0.2.dev0-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,982 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,982 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,982 tools.py:270 DEBUG Added /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2017-01-04 17:13:55,982 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/MySQLdb/1.2.5-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/MySQL_python-1.2.5-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,982 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/psutil/3.4.2-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/psutil-3.4.2-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,982 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.7/site-packages/keyring-3.8/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,983 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,983 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,983 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,983 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,983 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,983 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,983 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,983 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,984 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,984 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,984 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/pbs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,984 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,984 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,984 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,985 easyblock.py:590 INFO Found file timing.tgz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz | |
== 2017-01-04 17:13:55,985 easyblock.py:390 DEBUG File /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz found for patch ('timing.tgz', '.') | |
== 2017-01-04 17:13:55,985 filetools.py:237 INFO Command eb found at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
== 2017-01-04 17:13:55,985 tools.py:261 DEBUG Also considering installation prefix /user/data/gent/vsc400/vsc40023/easybuild_easy_installed... | |
== 2017-01-04 17:13:55,985 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,985 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-B3gTBZ/files_pr3968/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,985 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,985 tools.py:266 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs | |
== 2017-01-04 17:13:55,986 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_base-2.5.5-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,986 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_install-0.10.20-py2.7.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,986 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_framework-3.0.2.dev0-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,986 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,986 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,986 tools.py:270 DEBUG Added /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2017-01-04 17:13:55,986 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/MySQLdb/1.2.5-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/MySQL_python-1.2.5-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,986 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/psutil/3.4.2-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/psutil-3.4.2-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,987 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.7/site-packages/keyring-3.8/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,987 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,987 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,987 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,987 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,987 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,987 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,987 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,988 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,988 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,988 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,988 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/pbs/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,988 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,988 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,988 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
== 2017-01-04 17:13:55,988 easyblock.py:590 INFO Found file OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch at /tmp/eb-B3gTBZ/files_pr3968/o/OpenBLAS/OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch | |
== 2017-01-04 17:13:55,989 easyblock.py:390 DEBUG File /tmp/eb-B3gTBZ/files_pr3968/o/OpenBLAS/OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch found for patch OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch | |
== 2017-01-04 17:13:55,989 easyblock.py:415 INFO Added patches: [{'path': '/user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz', 'copy': '.', 'name': 'large.tgz', 'checksum': None}, {'path': '/user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz', 'copy': '.', 'name': 'timing.tgz', 'checksum': None}, {'path': '/tmp/eb-B3gTBZ/files_pr3968/o/OpenBLAS/OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch', 'name': 'OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch', 'checksum': None}] | |
== 2017-01-04 17:13:55,989 filetools.py:514 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2017-01-04 17:13:56,013 easyblock.py:1496 INFO md5 checksum for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/v0.2.19.tar.gz: 28c998054fd377279741c6f0b9ea7941 | |
== 2017-01-04 17:13:56,013 filetools.py:514 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2017-01-04 17:13:56,029 easyblock.py:1496 INFO md5 checksum for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/lapack-3.7.0.tgz: 697bb8d67c7d336a0f339cc9dd0fa72f | |
== 2017-01-04 17:13:56,029 filetools.py:514 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2017-01-04 17:13:56,030 easyblock.py:1496 INFO md5 checksum for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz: 5d138a84f302fd6804e4fab4b338cb18 | |
== 2017-01-04 17:13:56,030 filetools.py:514 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2017-01-04 17:13:56,034 easyblock.py:1496 INFO md5 checksum for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz: 2025bee0fecccc792938978d857472f4 | |
== 2017-01-04 17:13:56,034 filetools.py:514 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2017-01-04 17:13:56,035 easyblock.py:1496 INFO md5 checksum for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz: 5d138a84f302fd6804e4fab4b338cb18 | |
== 2017-01-04 17:13:56,035 filetools.py:514 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2017-01-04 17:13:56,038 easyblock.py:1496 INFO md5 checksum for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz: 2025bee0fecccc792938978d857472f4 | |
== 2017-01-04 17:13:56,038 filetools.py:514 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2017-01-04 17:13:56,038 easyblock.py:1496 INFO md5 checksum for /tmp/eb-B3gTBZ/files_pr3968/o/OpenBLAS/OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch: f08842e0434ede1150f3d80abe5982af | |
== 2017-01-04 17:13:56,038 config.py:423 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules | |
== 2017-01-04 17:13:56,038 easyblock.py:1513 INFO Checking dirs that need to be created: ['/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all/OpenBLAS', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/numlib/OpenBLAS'] | |
== 2017-01-04 17:13:56,039 filetools.py:967 INFO Creating directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0 (parents: True, set_gid: False, sticky: False) | |
== 2017-01-04 17:13:56,040 filetools.py:995 DEBUG Not creating existing path /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all/OpenBLAS | |
== 2017-01-04 17:13:56,042 filetools.py:995 DEBUG Not creating existing path /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/numlib/OpenBLAS | |
== 2017-01-04 17:13:56,043 easyblock.py:2263 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: ['configure'], module_only: False, force: True | |
== 2017-01-04 17:13:56,043 build_log.py:216 INFO creating build dir, resetting environment... | |
== 2017-01-04 17:13:56,043 easyblock.py:2271 INFO Starting ready step | |
== 2017-01-04 17:13:56,043 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:56,043 templates.py:175 DEBUG version found in easyconfig is 0.2.19 | |
== 2017-01-04 17:13:56,043 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 17:13:56,043 templates.py:219 DEBUG name: name, config: OpenBLAS | |
== 2017-01-04 17:13:56,044 templates.py:219 DEBUG name: version, config: 0.2.19 | |
== 2017-01-04 17:13:56,044 templates.py:219 DEBUG name: versionsuffix, config: -LAPACK-3.7.0 | |
== 2017-01-04 17:13:56,044 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 17:13:56,044 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:56,044 templates.py:175 DEBUG version found in easyconfig is 0.2.19 | |
== 2017-01-04 17:13:56,044 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 17:13:56,044 templates.py:219 DEBUG name: name, config: OpenBLAS | |
== 2017-01-04 17:13:56,044 templates.py:219 DEBUG name: version, config: 0.2.19 | |
== 2017-01-04 17:13:56,044 templates.py:219 DEBUG name: versionsuffix, config: -LAPACK-3.7.0 | |
== 2017-01-04 17:13:56,045 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 17:13:56,045 easyblock.py:2274 INFO Running method check_readiness_step part of step ready | |
== 2017-01-04 17:13:56,045 easyblock.py:1401 DEBUG Desired parallelism specified via 'parallel' build option: None | |
== 2017-01-04 17:13:56,046 affinity.py:209 DEBUG sched_getaffinity for pid 13867 returned cpuset 0-23 | |
== 2017-01-04 17:13:56,046 run.py:86 DEBUG Using cached value for command 'ulimit -u': ('4096\n', 0) | |
== 2017-01-04 17:13:56,046 easyblock.py:1404 INFO Setting parallelism: 24 | |
== 2017-01-04 17:13:56,046 modules.py:634 DEBUG Current MODULEPATH: /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc | |
== 2017-01-04 17:13:56,046 modules.py:641 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command | |
== 2017-01-04 17:13:56,046 modules.py:641 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command | |
== 2017-01-04 17:13:56,046 modules.py:645 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python --terse list' from /tmp/eb-B3gTBZ/tmpVJdC8l/hpcugent | |
== 2017-01-04 17:13:56,079 modules.py:651 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python --terse list': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["_ModuleTable001_"] = "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"; | |
os.environ["_ModuleTable002_"] = "LH0sfSxbInNob3J0Il09ImNsdXN0ZXIiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSx9LG1wYXRoQT17Ii91c2VyL2hvbWUvZ2VudC92c2M0MDAvdnNjNDAwMjMvZWJfcGhhbnB5c2NyYXRjaC9DTzcvaGFzd2VsbC1pYi9tb2R1bGVzL2FsbCIsIi9ldGMvbW9kdWxlZmlsZXMvdnNjIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9ldGMvbW9kdWxlZmlsZXMvdnNjIixbInZlcnNpb24iXT0yLH0="; | |
os.environ["_ModuleTable_Sz_"] = "2"; | |
; stderr: cluster/golett | |
== 2017-01-04 17:13:56,079 modules.py:968 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python --terse list' ran fine | |
== 2017-01-04 17:13:56,079 modules.py:682 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to [] | |
== 2017-01-04 17:13:56,079 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '') | |
== 2017-01-04 17:13:56,080 modules.py:682 DEBUG Correcting paths in $LD_PRELOAD from [''] to [] | |
== 2017-01-04 17:13:56,080 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
== 2017-01-04 17:13:56,080 easyblock.py:1409 WARNING Loaded modules detected: ['cluster/golett'] | |
== 2017-01-04 17:13:56,080 easyconfig.py:608 DEBUG Dependencies BEFORE filtering: [] | |
== 2017-01-04 17:13:56,080 toolchain.py:375 DEBUG add_dependencies: adding toolchain dependencies [] | |
== 2017-01-04 17:13:56,080 modules.py:418 DEBUG Found cached result for 'module avail' with key '('MODULEPATH=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc', 'lmod', '--show-hidden')': ['3to2/1.1.1-intel-2016b-Python-2.7.12', 'ABINIT/8.0.8b-intel-2016b', 'ART/2016.06.05-intel-2016b', 'ASE/3.11.0-intel-2016b-Python-2.7.12', 'ATK/2.22.0-intel-2016b', 'Autoconf/2.69-foss-2016b', 'Autoconf/2.69-foss-2017a', 'Autoconf/2.69-intel-2016b', 'Automake/1.15-foss-2016b', 'Automake/1.15-foss-2017a', 'Automake/1.15-intel-2016b', 'Autotools/20150215-foss-2016b', 'Autotools/20150215-foss-2017a', 'Autotools/20150215-intel-2016b', 'BBMap/36.62-intel-2016b-Java-1.8.0_112', 'BEDTools/2.26.0-intel-2016b', 'BWA/0.7.15-intel-2016b', 'BamTools/2.4.0-foss-2016b', 'BamUtil/1.0.13-intel-2016b', 'BioPerl/1.7.0-foss-2016b-Perl-5.24.0', 'Biopython/1.68-foss-2016b-Python-2.7.12', 'Biopython/1.68-intel-2016b-Python-2.7.12', 'Biopython/1.68-intel-2016b-Python-3.5.2', 'Bison/2.7', 'Bison/3.0.4', 'Bison/3.0.4-GCCcore-5.4.0', 'Bison/3.0.4-GCCcore-6.3.0', 'Bison/3.0.4-foss-2016b', 'Bison/3.0.4-intel-2016b', 'Blender/2.77a-intel-2016b-Python-3.5.2', 'Blosc/1.11.1-intel-2016b', 'Boost/1.61.0-foss-2016b', 'Boost/1.61.0-foss-2016b-Python-2.7.12', 'Boost/1.61.0-intel-2016b', 'Boost/1.61.0-intel-2016b-Python-2.7.12', 'CBLAS/20110120-foss-2016b', 'CDO/1.7.2-intel-2016b', 'CGAL/4.8.1-intel-2016b', 'CGAL/4.8.1-intel-2016b-Python-2.7.12', 'CMake/3.4.3-foss-2016b', 'CMake/3.5.2-foss-2016b', 'CMake/3.5.2-intel-2016b', 'CMake/3.6.1-foss-2016b', 'CMake/3.6.1-intel-2016b', 'CMake/3.6.2-foss-2016b', 'CMake/3.6.2-intel-2016b', 'CMake/3.7.1-intel-2016b', 'CP2K/3.0-intel-2016b', 'CP2K/3.0-intel-2016b-psmp', 'Cantera/2.2.1-intel-2016b-Python-2.7.12', 'Cargo/0.13.0-foss-2016b', 'CheMPS2/1.8-intel-2016b', 'Clustal-Omega/1.2.0-foss-2016b', 'ClustalW2/2.1-foss-2016b', 'CryptoMiniSat/5.0.1-intel-2016b-Python-2.7.12', 'Cufflinks/2.2.1-foss-2016b', 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'mypy/0.4.5-intel-2016b', 'ncbi-vdb/2.5.8-1-foss-2016b', 'ncbi-vdb/2.7.0-foss-2016b', 'ncurses/6.0', 'ncurses/6.0-foss-2016b', 'ncurses/6.0-foss-2017a', 'ncurses/6.0-intel-2016b', 'ncview/2.1.7-intel-2016b', 'netCDF-C++4/4.3.0-intel-2016b', 'netCDF-Fortran/4.4.4-foss-2016b', 'netCDF-Fortran/4.4.4-intel-2016b', 'netCDF/4.4.1-foss-2016b', 'netCDF/4.4.1-intel-2016b', 'netCDF/4.4.1.1-foss-2016b', 'nettle/3.2-foss-2016b', 'nettle/3.2-intel-2016b', 'nose-parameterized/0.5.0-intel-2016b-Python-3.5.2', 'numactl/2.0.11-GCC-5.4.0-2.26', 'numactl/2.0.11-intel-2016b', 'numexpr/2.6.1-intel-2016b-Python-2.7.12', 'numexpr/2.6.1-intel-2016b-Python-3.5.2', 'numpy/1.9.2-intel-2016b-Python-2.7.12', 'pandas/0.18.1-intel-2016b-Python-2.7.12', 'pandas/0.18.1-intel-2016b-Python-3.5.2', 'pandas/0.19.0-foss-2016b-Python-2.7.12', 'pandas/0.19.0-foss-2016b-Python-3.5.2', 'pandas/0.19.0-intel-2016b-Python-2.7.12', 'pandas/0.19.0-intel-2016b-Python-3.5.2', 'pandas/0.19.1-intel-2016b-Python-2.7.12', 'pandas/0.19.1-intel-2016b-Python-3.5.2', 'path.py/8.2.1-intel-2016b-Python-2.7.12', 'path.py/8.2.1-intel-2016b-Python-3.5.2', 'pbs_python/4.6.0-intel-2016b-Python-2.7.12', 'pip/8.1.2-intel-2016b-Python-2.7.12', 'pixman/0.34.0-intel-2016b', 'pkg-config/0.29.1-foss-2016b', 'pkg-config/0.29.1-intel-2016b', 'pkgconfig/1.1.0-foss-2016b-Python-2.7.12', 'pkgconfig/1.1.0-foss-2016b-Python-3.5.2', 'pkgconfig/1.1.0-intel-2016b-Python-2.7.12', 'pkgconfig/1.1.0-intel-2016b-Python-3.5.2', 'prokka/1.11-foss-2016b-BioPerl-1.7.0', 'prompt-toolkit/1.0.6-intel-2016b-Python-2.7.12', 'prompt-toolkit/1.0.6-intel-2016b-Python-3.5.2', 'pymatgen/4.1.1-intel-2016b-Python-2.7.12', 'pymatgen/4.3.2-intel-2016b-Python-2.7.12', 'qrupdate/1.1.2-intel-2016b', 'requests/2.11.1-intel-2016b-Python-2.7.12', 'requests/2.11.1-intel-2016b-Python-3.5.2', 'scikit-image/0.12.3-intel-2016b-Python-2.7.12', 'scikit-image/0.12.3-intel-2016b-Python-3.5.2', 'scikit-learn/0.17.1-intel-2016b-Python-2.7.12', 'scikit-learn/0.18-intel-2016b-Python-2.7.12', 'scikit-learn/0.18-intel-2016b-Python-3.5.2', 'scipy/0.16.0-intel-2016b-Python-2.7.12', 'seqtk/1.2-foss-2016b', 'setuptools/1.4.2', 'spglib-python/1.9.4.2-intel-2016b-Python-2.7.12', 'spglib-python/1.9.5-intel-2016b-Python-2.7.12', 'tabix/0.2.6-intel-2016b', 'taco/0.5.1-intel-2016b-Python-2.7.12', 'testpath/0.3-intel-2016b-Python-2.7.12', 'testpath/0.3-intel-2016b-Python-3.5.2', 'util-linux/2.28.1-intel-2016b', 'util-linux/2.29-foss-2016b', 'util-linux/2.29-intel-2016b', 'vsc-base/2.5.1-intel-2016b-Python-2.7.12', 'vsc-install/0.10.11-intel-2016b-Python-2.7.12', 'vsc-mympirun/3.4.3-intel-2016b-Python-2.7.12', 'wcwidth/0.1.7-intel-2016b-Python-2.7.12', 'wcwidth/0.1.7-intel-2016b-Python-3.5.2', 'wget/1.17.1-foss-2016b', 'worker/1.6.6-intel-2016b', 'worker/1.6.7-intel-2016b', 'wxPython/3.0.2.0-intel-2016b-Python-2.7.12', 'x264/20160614-intel-2016b', 'xprop/1.2.2-foss-2016b', 'xprop/1.2.2-intel-2016b', 'zlib/1.2.10', 'zlib/1.2.10-GCCcore-6.3.0', 'zlib/1.2.8', 'zlib/1.2.8-GCCcore-5.4.0', 'zlib/1.2.8-GCCcore-6.3.0', 'zlib/1.2.8-foss-2016b', 'zlib/1.2.8-intel-2016b'] | |
== 2017-01-04 17:13:56,081 easyconfig.py:608 DEBUG Dependencies BEFORE filtering: [] | |
== 2017-01-04 17:13:56,082 easyblock.py:2274 INFO Running method make_builddir part of step ready | |
== 2017-01-04 17:13:56,082 easyblock.py:763 DEBUG Creating the build directory /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0 (cleanup: True) | |
== 2017-01-04 17:13:56,082 filetools.py:967 INFO Creating directory /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0 (parents: True, set_gid: False, sticky: False) | |
== 2017-01-04 17:13:56,082 easyblock.py:2274 INFO Running method env_reset_changes part of step ready | |
== 2017-01-04 17:13:56,082 easyblock.py:2274 INFO Running method handle_iterate_opts part of step ready | |
== 2017-01-04 17:13:56,082 easyblock.py:2263 DEBUG Not skipping source step (skippable: True, skip: None, skipsteps: ['configure'], module_only: False, force: True | |
== 2017-01-04 17:13:56,083 build_log.py:216 INFO unpacking... | |
== 2017-01-04 17:13:56,083 easyblock.py:2271 INFO Starting source step | |
== 2017-01-04 17:13:56,083 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:56,083 templates.py:175 DEBUG version found in easyconfig is 0.2.19 | |
== 2017-01-04 17:13:56,083 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 17:13:56,083 templates.py:219 DEBUG name: name, config: OpenBLAS | |
== 2017-01-04 17:13:56,083 templates.py:219 DEBUG name: version, config: 0.2.19 | |
== 2017-01-04 17:13:56,084 templates.py:219 DEBUG name: versionsuffix, config: -LAPACK-3.7.0 | |
== 2017-01-04 17:13:56,084 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 17:13:56,084 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:56,084 templates.py:175 DEBUG version found in easyconfig is 0.2.19 | |
== 2017-01-04 17:13:56,084 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 17:13:56,084 templates.py:219 DEBUG name: name, config: OpenBLAS | |
== 2017-01-04 17:13:56,084 templates.py:219 DEBUG name: version, config: 0.2.19 | |
== 2017-01-04 17:13:56,084 templates.py:219 DEBUG name: versionsuffix, config: -LAPACK-3.7.0 | |
== 2017-01-04 17:13:56,084 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 17:13:56,085 easyblock.py:2274 INFO Running method checksum_step part of step source | |
== 2017-01-04 17:13:56,085 easyblock.py:1529 INFO Checksum verification for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/v0.2.19.tar.gz using None passed. | |
== 2017-01-04 17:13:56,085 easyblock.py:1529 INFO Checksum verification for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/lapack-3.7.0.tgz using None passed. | |
== 2017-01-04 17:13:56,085 easyblock.py:1529 INFO Checksum verification for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz using None passed. | |
== 2017-01-04 17:13:56,085 easyblock.py:1529 INFO Checksum verification for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz using None passed. | |
== 2017-01-04 17:13:56,085 easyblock.py:1529 INFO Checksum verification for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz using None passed. | |
== 2017-01-04 17:13:56,085 easyblock.py:1529 INFO Checksum verification for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz using None passed. | |
== 2017-01-04 17:13:56,085 easyblock.py:1529 INFO Checksum verification for /tmp/eb-B3gTBZ/files_pr3968/o/OpenBLAS/OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch using None passed. | |
== 2017-01-04 17:13:56,085 easyblock.py:2274 INFO Running method extract_step part of step source | |
== 2017-01-04 17:13:56,086 easyblock.py:1536 INFO Unpacking source v0.2.19.tar.gz | |
== 2017-01-04 17:13:56,086 filetools.py:995 DEBUG Not creating existing path /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0 | |
== 2017-01-04 17:13:56,086 filetools.py:201 DEBUG Unpacking /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/v0.2.19.tar.gz in directory /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0. | |
== 2017-01-04 17:13:56,086 run.py:137 DEBUG run_cmd: running cmd tar xzf /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/v0.2.19.tar.gz (in /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0) | |
== 2017-01-04 17:13:56,575 run.py:433 DEBUG cmd "tar xzf /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/v0.2.19.tar.gz" exited with exitcode 0 and output: | |
== 2017-01-04 17:13:56,575 run.py:477 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2017-01-04 17:13:56,576 filetools.py:595 DEBUG Last dir list ['Makefile.ia64', 'common_macro.h', 'GotoBLAS_02QuickInstall.txt', 'Makefile.install', 'USAGE.md', 'exports', 'benchmark', 'CONTRIBUTORS.md', 'cpuid_mips.c', 'driver', 'version.h', 'cpuid_sparc.c', 'lapack-netlib', 'cpuid_mips64.c', 'ftest3.f', 'common_ia64.h', 'Makefile.generic', 'cpuid_arm.c', 'common.h', 'common_linux.h', 'symcopy.h', 'common_d.h', 'Makefile.alpha', 'common_thread.h', 'cpuid_x86.c', 'getarch.c', 'common_power.h', 'ctest1.c', 'common_arm.h', 'getarch_2nd.c', 'common_level2.h', 'ftest.f', 'GotoBLAS_01Readme.txt', 'quickbuild.32bit', 'common_z.h', 'interface', 'Makefile.sparc', 'common_s.h', 'quickbuild.win32', 'CMakeLists.txt', 'ctest.c', 'common_x86.h', 'LICENSE', 'common_q.h', 'common_stackalloc.h', 'GotoBLAS_05LargePage.txt', 'Makefile.power', 'cpuid_arm64.c', 'common_x86_64.h', 'Makefile.mips64', 'cpuid_ia64.c', 'BACKERS.md', 'lapack-devel.log', 'quickbuild.win64', 'openblas_config_template.h', 'segfaults.patch', 'l1param.h', 'ctest', 'Changelog.txt', 'Makefile.system', 'GotoBLAS_00License.txt', 'cblas.h', 'reference', 'Makefile.prebuild', 'common_arm64.h', 'Makefile.mips', 'make.inc', 'common_c.h', 'common_sparc.h', 'GotoBLAS_03FAQ.txt', 'common_interface.h', 'common_lapack.h', 'common_reference.h', 'common_param.h', 'GotoBLAS_04FAQ.txt', 'common_level3.h', 'Makefile.x86', 'TargetList.txt', 'Makefile.x86_64', 'Makefile.arm64', 'utest', 'common_x.h', 'c_check', 'README.md', 'Makefile.tail', 'lapack', 'test', 'Makefile.arm', 'common_level1.h', 'common_mips64.h', 'f_check', 'ctest2.c', 'ftest2.f', 'kernel', 'cpuid.S', 'common_alpha.h', 'cpuid_power.c', 'cpuid.h', 'cpuid_alpha.c', 'Makefile', 'Makefile.rule', 'cmake', 'quickbuild.64bit', 'appveyor.yml', 'param.h', 'common_mips.h', 'GotoBLAS_06WeirdPerformance.txt', 'l2param.h'] | |
== 2017-01-04 17:13:56,576 filetools.py:596 DEBUG Possible new dir /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19 found | |
== 2017-01-04 17:13:56,576 easyblock.py:1536 INFO Unpacking source lapack-3.7.0.tgz | |
== 2017-01-04 17:13:56,576 filetools.py:995 DEBUG Not creating existing path /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0 | |
== 2017-01-04 17:13:56,576 filetools.py:201 DEBUG Unpacking /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/lapack-3.7.0.tgz in directory /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0. | |
== 2017-01-04 17:13:56,577 run.py:137 DEBUG run_cmd: running cmd cd OpenBLAS-0.2.19; rm -rf lapack-netlib;mkdir lapack-netlib;tar -C lapack-netlib --strip-components=1 -zxf /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/lapack-3.7.0.tgz; cd - (in /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0) | |
== 2017-01-04 17:13:57,007 run.py:433 DEBUG cmd "cd OpenBLAS-0.2.19; rm -rf lapack-netlib;mkdir lapack-netlib;tar -C lapack-netlib --strip-components=1 -zxf /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/lapack-3.7.0.tgz; cd -" exited with exitcode 0 and output: | |
/tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0 | |
== 2017-01-04 17:13:57,007 run.py:477 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2017-01-04 17:13:57,008 filetools.py:595 DEBUG Last dir list ['Makefile.ia64', 'common_macro.h', 'GotoBLAS_02QuickInstall.txt', 'Makefile.install', 'USAGE.md', 'exports', 'benchmark', 'CONTRIBUTORS.md', 'cpuid_mips.c', 'driver', 'version.h', 'cpuid_sparc.c', 'lapack-netlib', 'cpuid_mips64.c', 'ftest3.f', 'common_ia64.h', 'Makefile.generic', 'cpuid_arm.c', 'common.h', 'common_linux.h', 'symcopy.h', 'common_d.h', 'Makefile.alpha', 'common_thread.h', 'cpuid_x86.c', 'getarch.c', 'common_power.h', 'ctest1.c', 'common_arm.h', 'getarch_2nd.c', 'common_level2.h', 'ftest.f', 'GotoBLAS_01Readme.txt', 'quickbuild.32bit', 'common_z.h', 'interface', 'Makefile.sparc', 'common_s.h', 'quickbuild.win32', 'CMakeLists.txt', 'ctest.c', 'common_x86.h', 'LICENSE', 'common_q.h', 'common_stackalloc.h', 'GotoBLAS_05LargePage.txt', 'Makefile.power', 'cpuid_arm64.c', 'common_x86_64.h', 'Makefile.mips64', 'cpuid_ia64.c', 'BACKERS.md', 'lapack-devel.log', 'quickbuild.win64', 'openblas_config_template.h', 'segfaults.patch', 'l1param.h', 'ctest', 'Changelog.txt', 'Makefile.system', 'GotoBLAS_00License.txt', 'cblas.h', 'reference', 'Makefile.prebuild', 'common_arm64.h', 'Makefile.mips', 'make.inc', 'common_c.h', 'common_sparc.h', 'GotoBLAS_03FAQ.txt', 'common_interface.h', 'common_lapack.h', 'common_reference.h', 'common_param.h', 'GotoBLAS_04FAQ.txt', 'common_level3.h', 'Makefile.x86', 'TargetList.txt', 'Makefile.x86_64', 'Makefile.arm64', 'utest', 'common_x.h', 'c_check', 'README.md', 'Makefile.tail', 'lapack', 'test', 'Makefile.arm', 'common_level1.h', 'common_mips64.h', 'f_check', 'ctest2.c', 'ftest2.f', 'kernel', 'cpuid.S', 'common_alpha.h', 'cpuid_power.c', 'cpuid.h', 'cpuid_alpha.c', 'Makefile', 'Makefile.rule', 'cmake', 'quickbuild.64bit', 'appveyor.yml', 'param.h', 'common_mips.h', 'GotoBLAS_06WeirdPerformance.txt', 'l2param.h'] | |
== 2017-01-04 17:13:57,008 filetools.py:596 DEBUG Possible new dir /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19 found | |
== 2017-01-04 17:13:57,008 easyblock.py:1536 INFO Unpacking source large.tgz | |
== 2017-01-04 17:13:57,008 filetools.py:995 DEBUG Not creating existing path /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0 | |
== 2017-01-04 17:13:57,008 filetools.py:201 DEBUG Unpacking /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz in directory /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0. | |
== 2017-01-04 17:13:57,008 run.py:137 DEBUG run_cmd: running cmd tar xzf /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz (in /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0) | |
== 2017-01-04 17:13:57,016 run.py:433 DEBUG cmd "tar xzf /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz" exited with exitcode 0 and output: | |
== 2017-01-04 17:13:57,016 run.py:477 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2017-01-04 17:13:57,016 filetools.py:595 DEBUG Last dir list ['OpenBLAS-0.2.19', 'large'] | |
== 2017-01-04 17:13:57,016 filetools.py:596 DEBUG Possible new dir /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0 found | |
== 2017-01-04 17:13:57,017 easyblock.py:1536 INFO Unpacking source timing.tgz | |
== 2017-01-04 17:13:57,017 filetools.py:995 DEBUG Not creating existing path /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0 | |
== 2017-01-04 17:13:57,017 filetools.py:201 DEBUG Unpacking /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz in directory /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0. | |
== 2017-01-04 17:13:57,017 run.py:137 DEBUG run_cmd: running cmd tar xzf /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz (in /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0) | |
== 2017-01-04 17:13:57,095 run.py:433 DEBUG cmd "tar xzf /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz" exited with exitcode 0 and output: | |
== 2017-01-04 17:13:57,096 run.py:477 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2017-01-04 17:13:57,096 filetools.py:595 DEBUG Last dir list ['OpenBLAS-0.2.19', 'large', 'TIMING', 'make.inc'] | |
== 2017-01-04 17:13:57,096 filetools.py:596 DEBUG Possible new dir /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0 found | |
== 2017-01-04 17:13:57,096 easyblock.py:2263 DEBUG Not skipping patch step (skippable: True, skip: None, skipsteps: ['configure'], module_only: False, force: True | |
== 2017-01-04 17:13:57,096 build_log.py:216 INFO patching... | |
== 2017-01-04 17:13:57,096 easyblock.py:2271 INFO Starting patch step | |
== 2017-01-04 17:13:57,097 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:57,097 templates.py:175 DEBUG version found in easyconfig is 0.2.19 | |
== 2017-01-04 17:13:57,097 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 17:13:57,097 templates.py:219 DEBUG name: name, config: OpenBLAS | |
== 2017-01-04 17:13:57,097 templates.py:219 DEBUG name: version, config: 0.2.19 | |
== 2017-01-04 17:13:57,097 templates.py:219 DEBUG name: versionsuffix, config: -LAPACK-3.7.0 | |
== 2017-01-04 17:13:57,097 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 17:13:57,097 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:57,098 templates.py:175 DEBUG version found in easyconfig is 0.2.19 | |
== 2017-01-04 17:13:57,098 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 17:13:57,098 templates.py:219 DEBUG name: name, config: OpenBLAS | |
== 2017-01-04 17:13:57,098 templates.py:219 DEBUG name: version, config: 0.2.19 | |
== 2017-01-04 17:13:57,098 templates.py:219 DEBUG name: versionsuffix, config: -LAPACK-3.7.0 | |
== 2017-01-04 17:13:57,098 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 17:13:57,098 easyblock.py:2274 INFO Running method patch_step part of step patch | |
== 2017-01-04 17:13:57,098 easyblock.py:1548 INFO Applying patch large.tgz | |
== 2017-01-04 17:13:57,098 easyblock.py:1560 DEBUG Source index: 0; patch level: None; source path suffix: .; copy patch: <module 'copy' from '/usr/lib64/python2.7/copy.pyo'> | |
== 2017-01-04 17:13:57,099 easyblock.py:1565 DEBUG Determine begin path for patch large.tgz: /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19 | |
== 2017-01-04 17:13:57,099 easyblock.py:1574 DEBUG Applying patch {'path': '/user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz', 'copy': '.', 'name': 'large.tgz', 'md5': '5d138a84f302fd6804e4fab4b338cb18', 'checksum': None} in path /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19 | |
== 2017-01-04 17:13:57,100 filetools.py:742 DEBUG Copied patch /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/large.tgz to dir /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19 | |
== 2017-01-04 17:13:57,100 easyblock.py:1548 INFO Applying patch timing.tgz | |
== 2017-01-04 17:13:57,100 easyblock.py:1560 DEBUG Source index: 0; patch level: None; source path suffix: .; copy patch: <module 'copy' from '/usr/lib64/python2.7/copy.pyo'> | |
== 2017-01-04 17:13:57,100 easyblock.py:1570 DEBUG Using specified begin path for patch timing.tgz: /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19 | |
== 2017-01-04 17:13:57,100 easyblock.py:1574 DEBUG Applying patch {'path': '/user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz', 'copy': '.', 'name': 'timing.tgz', 'md5': '2025bee0fecccc792938978d857472f4', 'checksum': None} in path /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19 | |
== 2017-01-04 17:13:57,103 filetools.py:742 DEBUG Copied patch /user/data/gent/vsc400/vsc40023/EasyBuild/sources/o/OpenBLAS/timing.tgz to dir /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19 | |
== 2017-01-04 17:13:57,103 easyblock.py:1548 INFO Applying patch OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch | |
== 2017-01-04 17:13:57,103 easyblock.py:1560 DEBUG Source index: 0; patch level: None; source path suffix: ; copy patch: <module 'copy' from '/usr/lib64/python2.7/copy.pyo'> | |
== 2017-01-04 17:13:57,104 easyblock.py:1570 DEBUG Using specified begin path for patch OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch: /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19 | |
== 2017-01-04 17:13:57,104 easyblock.py:1574 DEBUG Applying patch {'path': '/tmp/eb-B3gTBZ/files_pr3968/o/OpenBLAS/OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch', 'md5': 'f08842e0434ede1150f3d80abe5982af', 'name': 'OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch', 'checksum': None} in path /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19 | |
== 2017-01-04 17:13:57,105 filetools.py:772 DEBUG Guessed patch level 1 for patch /tmp/eb-B3gTBZ/files_pr3968/o/OpenBLAS/OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch | |
== 2017-01-04 17:13:57,105 run.py:137 DEBUG run_cmd: running cmd patch -b -p1 -i /tmp/eb-B3gTBZ/files_pr3968/o/OpenBLAS/OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch (in /tmp/vsc40023/easybuild_build/OpenBLAS/0.2.19/GCC-6.3.0-2.27-LAPACK-3.7.0/OpenBLAS-0.2.19) | |
== 2017-01-04 17:13:57,111 run.py:433 DEBUG cmd "patch -b -p1 -i /tmp/eb-B3gTBZ/files_pr3968/o/OpenBLAS/OpenBLAS-0.2.19_LAPACK-3.7.0-fixes.patch" exited with exitcode 0 and output: | |
patching file Makefile.install | |
patching file lapack-netlib/SRC/CMakeLists.txt | |
patching file lapack-netlib/SRC/Makefile | |
== 2017-01-04 17:13:57,112 run.py:477 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
== 2017-01-04 17:13:57,112 easyblock.py:2263 DEBUG Not skipping prepare step (skippable: False, skip: None, skipsteps: ['configure'], module_only: False, force: True | |
== 2017-01-04 17:13:57,112 build_log.py:216 INFO preparing... | |
== 2017-01-04 17:13:57,112 easyblock.py:2271 INFO Starting prepare step | |
== 2017-01-04 17:13:57,112 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:57,112 templates.py:175 DEBUG version found in easyconfig is 0.2.19 | |
== 2017-01-04 17:13:57,113 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 17:13:57,113 templates.py:219 DEBUG name: name, config: OpenBLAS | |
== 2017-01-04 17:13:57,113 templates.py:219 DEBUG name: version, config: 0.2.19 | |
== 2017-01-04 17:13:57,113 templates.py:219 DEBUG name: versionsuffix, config: -LAPACK-3.7.0 | |
== 2017-01-04 17:13:57,113 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 17:13:57,113 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144ea90> | |
== 2017-01-04 17:13:57,113 templates.py:175 DEBUG version found in easyconfig is 0.2.19 | |
== 2017-01-04 17:13:57,113 templates.py:219 DEBUG name: github_account, config: None | |
== 2017-01-04 17:13:57,113 templates.py:219 DEBUG name: name, config: OpenBLAS | |
== 2017-01-04 17:13:57,114 templates.py:219 DEBUG name: version, config: 0.2.19 | |
== 2017-01-04 17:13:57,114 templates.py:219 DEBUG name: versionsuffix, config: -LAPACK-3.7.0 | |
== 2017-01-04 17:13:57,114 templates.py:219 DEBUG name: versionprefix, config: | |
== 2017-01-04 17:13:57,114 easyblock.py:2274 INFO Running method prepare_step part of step prepare | |
== 2017-01-04 17:13:57,114 modules.py:535 DEBUG Found cached result for 'module show GCC/6.3.0-2.27' with key '('MODULEPATH=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc', 'lmod', 'GCC/6.3.0-2.27')': os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
os.environ["_ModuleTable001_"] = "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"; | |
os.environ["_ModuleTable002_"] = "LH0sfSxbInNob3J0Il09ImNsdXN0ZXIiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSx9LG1wYXRoQT17Ii91c2VyL2hvbWUvZ2VudC92c2M0MDAvdnNjNDAwMjMvZWJfcGhhbnB5c2NyYXRjaC9DTzcvaGFzd2VsbC1pYi9tb2R1bGVzL2FsbCIsIi9ldGMvbW9kdWxlZmlsZXMvdnNjIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9ldGMvbW9kdWxlZmlsZXMvdnNjIixbInZlcnNpb24iXT0yLH0="; | |
os.environ["_ModuleTable_Sz_"] = "2"; | |
Failed to find the following module(s): "GCC/6.3.0-2.27" in your MODULEPATH | |
Try: | |
"module spider GCC/6.3.0-2.27" | |
to see if the module(s) are available across all compilers and MPI implementations. | |
== 2017-01-04 17:13:57,115 build_log.py:147 ERROR EasyBuild crashed with an error (at ?:124 in __init__): No module found for toolchain: GCC/6.3.0-2.27 (at easybuild/tools/toolchain/toolchain.py:549 in _load_modules) | |
== 2017-01-04 17:13:57,115 easyblock.py:2503 WARNING build failed (first 300 chars): No module found for toolchain: GCC/6.3.0-2.27 | |
== 2017-01-04 17:13:57,116 easyblock.py:276 INFO Closing log for application name OpenBLAS version 0.2.19 |
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