Created
April 30, 2024 15:28
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(partial) EasyBuild log for failed build of /tmp/eb-blmk4b4n/files_pr20440/h/HDDM/HDDM-0.9.9-foss-2021b.eb (PR(s) #20440)
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== 2024-04-30 15:28:13,965 pythonbundle.py:75 INFO exts_default_options: {'buildcmd': None, 'check_ldshared': None, 'download_dep_fail': True, 'install_src': None, 'install_target': 'install', 'pip_ignore_installed': True, 'pip_no_index': None, 'pip_verbose': None, 'req_py_majver': None, 'req_py_minver': None, 'sanity_pip_check': True, 'runtest': True, 'testinstall': False, 'unpack_sources': None, 'unversioned_packages': [], 'use_pip': True, 'use_pip_editable': False, 'use_pip_extras': None, 'use_pip_for_deps': False, 'use_pip_requirement': False, 'zipped_egg': False, 'source_urls': ['https://pypi.python.org/packages/source/%(nameletter)s/%(name)s'], 'options': {}} | |
== 2024-04-30 15:28:13,965 easyblock.py:4234 INFO Obtained application instance of for HDDM (easyblock: PythonBundle) | |
== 2024-04-30 15:28:13,965 easyblock.py:4247 DEBUG Skip set to False | |
== 2024-04-30 15:28:13,965 easyconfig.py:1702 INFO Generating template values... | |
== 2024-04-30 15:28:13,965 templates.py:201 DEBUG config: HDDM EasyConfig @ /tmp/eb-blmk4b4n/files_pr20440/h/HDDM/HDDM-0.9.9-foss-2021b.eb | |
== 2024-04-30 15:28:13,966 templates.py:231 DEBUG version found in easyconfig is 0.9.9 | |
== 2024-04-30 15:28:13,966 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-04-30 15:28:13,966 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-04-30 15:28:13,966 templates.py:333 DEBUG name: name, config: HDDM | |
== 2024-04-30 15:28:13,966 templates.py:333 DEBUG name: parallel, config: None | |
== 2024-04-30 15:28:13,966 templates.py:333 DEBUG name: version, config: 0.9.9 | |
== 2024-04-30 15:28:13,966 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-04-30 15:28:13,966 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-04-30 15:28:13,966 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2024-04-30 15:28:13,966 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2024-04-30 15:28:13,966 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='hddm', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='hddm', module_name='HDDM/0.9.9-foss-2021b', mpi_cmd_prefix='mpirun -n 1', name='HDDM', nameletter='H', nameletterlower='h', namelower='hddm', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', sysroot='', toolchain_name='foss', toolchain_version='2021b', version='0.9.9', version_major='0', version_major_minor='0.9', version_minor='9', versionprefix='', versionsuffix='' | |
== 2024-04-30 15:28:13,967 one.py:150 DEBUG Not copying '__builtins__' variable from parsed easyconfig | |
== 2024-04-30 15:28:13,967 one.py:529 DEBUG Extracted comments: | |
{'above': {}, 'header': [], 'inline': {}, 'iterabove': {}, 'iterinline': {}, 'tail': []} | |
== 2024-04-30 15:28:13,967 one.py:180 INFO Skipping reformatting value for parameter 'toolchain' | |
== 2024-04-30 15:28:13,967 one.py:180 INFO Skipping reformatting value for parameter 'toolchainopts' | |
== 2024-04-30 15:28:13,968 easyconfig.py:1265 DEBUG Dumped easyconfig: easyblock = 'PythonBundle' | |
name = 'HDDM' | |
version = '0.9.9' | |
homepage = 'https://hddm.readthedocs.io/' | |
description = """HDDM is a Python toolbox for hierarchical Bayesian parameter estimation | |
of the Drift Diffusion Model (via PyMC).""" | |
toolchain = {'name': 'foss', 'version': '2021b'} | |
toolchainopts = {'pic': True} | |
dependencies = [ | |
('Python', '3.9.6', '', ('GCCcore', '11.2.0')), | |
('SciPy-bundle', '2021.10'), | |
('Seaborn', '0.11.2'), | |
('statsmodels', '0.13.1'), | |
('scikit-learn', '1.0.1'), | |
('tqdm', '4.62.3', '', ('GCCcore', '11.2.0')), | |
('PyMC', '2.3.8'), | |
('ArviZ', '0.11.4'), | |
('PyTorch', '1.12.1'), | |
] | |
exts_defaultclass = 'PythonPackage' | |
exts_filter = ( | |
'python -c "import %(ext_name)s"', | |
'', | |
) | |
sanity_pip_check = True | |
use_pip = True | |
exts_default_options = { | |
'buildcmd': None, | |
'check_ldshared': None, | |
'download_dep_fail': True, | |
'install_src': None, | |
'install_target': 'install', | |
'options': {}, | |
'pip_ignore_installed': True, | |
'pip_no_index': None, | |
'pip_verbose': None, | |
'req_py_majver': None, | |
'req_py_minver': None, | |
'runtest': True, | |
'sanity_pip_check': True, | |
'source_urls': ['https://pypi.python.org/packages/source/%(nameletter)s/%(name)s'], | |
'testinstall': False, | |
'unpack_sources': None, | |
'unversioned_packages': [], | |
'use_pip': True, | |
'use_pip_editable': False, | |
'use_pip_extras': None, | |
'use_pip_for_deps': False, | |
'use_pip_requirement': False, | |
'zipped_egg': False, | |
} | |
exts_list = [ | |
('kabuki', '0.6.5', {'checksums': ['ffd8aabba4355a6ee55287120c02e8fb6300482970e3dbe615e07ed8102dba69']}), | |
('cloudpickle', '3.0.0', {'checksums': ['996d9a482c6fb4f33c1a35335cf8afd065d2a56e973270364840712d9131a882']}), | |
('ssm-simulators', '0.3.0', {'modulename': 'ssms', 'checksums': ['5477025d0c2a6a7f8aa3aa336a1368ff3256d86956f1bb93d7cc507a5651a860']}), | |
('patsy', '0.5.6', {'checksums': ['95c6d47a7222535f84bff7f63d7303f2e297747a598db89cf5c67f0c0c7d2cdb']}), | |
('HDDM', '0.9.9', {'checksums': ['2ed64db2be7acb5ef4c8b07dcf8ea4680fdfd168876be19db9cf885dd490fe5f']}), | |
] | |
sanity_check_paths = { | |
'files': ['bin/hddm_demo.py'], | |
'dirs': [], | |
} | |
moduleclass = 'bio' | |
== 2024-04-30 15:28:13,968 filetools.py:1912 INFO Creating directory /tmp/eb-blmk4b4n/reprod_20240430152813_806009 (parents: True, set_gid: True, sticky: False) | |
== 2024-04-30 15:28:13,968 filetools.py:1764 INFO Adjusting permissions recursively for /tmp/eb-blmk4b4n/reprod_20240430152813_806009 | |
== 2024-04-30 15:28:13,968 filetools.py:1794 DEBUG Current permissions for /tmp/eb-blmk4b4n/reprod_20240430152813_806009: 0o40755 | |
== 2024-04-30 15:28:13,968 filetools.py:1799 DEBUG Adding permissions for /tmp/eb-blmk4b4n/reprod_20240430152813_806009: 0o2000 | |
== 2024-04-30 15:28:13,968 filetools.py:1814 DEBUG Changing permissions for /tmp/eb-blmk4b4n/reprod_20240430152813_806009 to 0o42755 | |
== 2024-04-30 15:28:13,968 easyblock.py:4488 INFO Dumped easyconfig instance to /tmp/eb-blmk4b4n/reprod_20240430152813_806009/HDDM-0.9.9-foss-2021b.eb | |
== 2024-04-30 15:28:13,969 filetools.py:1912 INFO Creating directory /tmp/eb-blmk4b4n/reprod_20240430152813_806009/easyblocks (parents: True, set_gid: True, sticky: False) | |
== 2024-04-30 15:28:13,969 filetools.py:1764 INFO Adjusting permissions recursively for /tmp/eb-blmk4b4n/reprod_20240430152813_806009/easyblocks | |
== 2024-04-30 15:28:13,969 filetools.py:1794 DEBUG Current permissions for /tmp/eb-blmk4b4n/reprod_20240430152813_806009/easyblocks: 0o42755 | |
== 2024-04-30 15:28:13,969 filetools.py:1799 DEBUG Adding permissions for /tmp/eb-blmk4b4n/reprod_20240430152813_806009/easyblocks: 0o2000 | |
== 2024-04-30 15:28:13,969 filetools.py:1812 DEBUG Current permissions for /tmp/eb-blmk4b4n/reprod_20240430152813_806009/easyblocks are already OK: 0o42755 | |
== 2024-04-30 15:28:13,970 filetools.py:2425 INFO /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyblocks/generic/bundle.py copied to /tmp/eb-blmk4b4n/reprod_20240430152813_806009/easyblocks/bundle.py | |
== 2024-04-30 15:28:13,970 easyblock.py:4468 INFO Dumped easyblock bundle.py required for reproduction to /tmp/eb-blmk4b4n/reprod_20240430152813_806009/easyblocks | |
== 2024-04-30 15:28:13,971 filetools.py:1931 DEBUG Not creating existing path /tmp/eb-blmk4b4n/reprod_20240430152813_806009/easyblocks | |
== 2024-04-30 15:28:13,972 filetools.py:2425 INFO /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyblocks/generic/pythonbundle.py copied to /tmp/eb-blmk4b4n/reprod_20240430152813_806009/easyblocks/pythonbundle.py | |
== 2024-04-30 15:28:13,972 easyblock.py:4468 INFO Dumped easyblock pythonbundle.py required for reproduction to /tmp/eb-blmk4b4n/reprod_20240430152813_806009/easyblocks | |
== 2024-04-30 15:28:13,972 filetools.py:1912 INFO Creating directory /tmp/eb-blmk4b4n/reprod_20240430152813_806009/hooks (parents: True, set_gid: True, sticky: False) | |
== 2024-04-30 15:28:13,972 filetools.py:1764 INFO Adjusting permissions recursively for /tmp/eb-blmk4b4n/reprod_20240430152813_806009/hooks | |
== 2024-04-30 15:28:13,972 filetools.py:1794 DEBUG Current permissions for /tmp/eb-blmk4b4n/reprod_20240430152813_806009/hooks: 0o42755 | |
== 2024-04-30 15:28:13,972 filetools.py:1799 DEBUG Adding permissions for /tmp/eb-blmk4b4n/reprod_20240430152813_806009/hooks: 0o2000 | |
== 2024-04-30 15:28:13,972 filetools.py:1812 DEBUG Current permissions for /tmp/eb-blmk4b4n/reprod_20240430152813_806009/hooks are already OK: 0o42755 | |
== 2024-04-30 15:28:13,973 filetools.py:2425 INFO /home/boegelbot/boegelbot/eb_hooks.py copied to /tmp/eb-blmk4b4n/reprod_20240430152813_806009/hooks/eb_hooks.py | |
== 2024-04-30 15:28:13,973 easyblock.py:4500 INFO Dumped hooks file /home/boegelbot/boegelbot/eb_hooks.py which is (potentially) required for reproduction to /tmp/eb-blmk4b4n/reprod_20240430152813_806009/hooks/eb_hooks.py | |
== 2024-04-30 15:28:14,005 easyblock.py:2239 INFO Number of iterations to perform for central part of installation procedure: 1 | |
== 2024-04-30 15:28:14,005 build_log.py:267 INFO building and installing HDDM/0.9.9-foss-2021b... | |
== 2024-04-30 15:28:14,005 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/def-maintainers/boegelbot/rocky9/zen3/software | |
== 2024-04-30 15:28:14,006 filetools.py:2005 INFO Lock /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock does not exist | |
== 2024-04-30 15:28:14,006 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/def-maintainers/boegelbot/rocky9/zen3/software | |
== 2024-04-30 15:28:14,006 filetools.py:1946 INFO Creating lock at /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock... | |
== 2024-04-30 15:28:14,006 filetools.py:1912 INFO Creating directory /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock (parents: True, set_gid: True, sticky: False) | |
== 2024-04-30 15:28:14,007 filetools.py:1764 INFO Adjusting permissions recursively for /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock | |
== 2024-04-30 15:28:14,008 filetools.py:1794 DEBUG Current permissions for /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock: 0o42755 | |
== 2024-04-30 15:28:14,008 filetools.py:1799 DEBUG Adding permissions for /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock: 0o2000 | |
== 2024-04-30 15:28:14,008 filetools.py:1812 DEBUG Current permissions for /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock are already OK: 0o42755 | |
== 2024-04-30 15:28:14,008 filetools.py:1955 INFO Lock created: /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock | |
== 2024-04-30 15:28:14,008 easyblock.py:3947 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
== 2024-04-30 15:28:14,008 build_log.py:267 INFO fetching files... | |
== 2024-04-30 15:28:14,008 easyblock.py:3956 INFO Starting fetch step | |
== 2024-04-30 15:28:14,008 easyconfig.py:1702 INFO Generating template values... | |
== 2024-04-30 15:28:14,008 templates.py:201 DEBUG config: HDDM EasyConfig @ /tmp/eb-blmk4b4n/files_pr20440/h/HDDM/HDDM-0.9.9-foss-2021b.eb | |
== 2024-04-30 15:28:14,008 templates.py:231 DEBUG version found in easyconfig is 0.9.9 | |
== 2024-04-30 15:28:14,008 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,008 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,008 templates.py:333 DEBUG name: name, config: HDDM | |
== 2024-04-30 15:28:14,009 templates.py:333 DEBUG name: parallel, config: None | |
== 2024-04-30 15:28:14,009 templates.py:333 DEBUG name: version, config: 0.9.9 | |
== 2024-04-30 15:28:14,009 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-04-30 15:28:14,009 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-04-30 15:28:14,009 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2024-04-30 15:28:14,009 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2024-04-30 15:28:14,009 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='hddm', builddir='/tmp/boegelbot/HDDM/0.9.9/foss-2021b', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='hddm', installdir='/project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b', module_name='HDDM/0.9.9-foss-2021b', mpi_cmd_prefix='mpirun -n 1', name='HDDM', nameletter='H', nameletterlower='h', namelower='hddm', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021b', version='0.9.9', version_major='0', version_major_minor='0.9', version_minor='9', versionprefix='', versionsuffix='' | |
== 2024-04-30 15:28:14,009 easyblock.py:3964 INFO Running method fetch_step part of step fetch | |
== 2024-04-30 15:28:14,009 easyblock.py:2361 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
== 2024-04-30 15:28:14,009 easyblock.py:2389 INFO no sources provided | |
== 2024-04-30 15:28:14,009 easyblock.py:2404 INFO no patches provided | |
== 2024-04-30 15:28:14,009 templates.py:201 DEBUG config: {'name': 'kabuki', 'version': '0.6.5', 'options': {'buildcmd': None, 'check_ldshared': None, 'download_dep_fail': True, 'install_src': None, 'install_target': 'install', 'pip_ignore_installed': True, 'pip_no_index': None, 'pip_verbose': None, 'req_py_majver': None, 'req_py_minver': None, 'sanity_pip_check': True, 'runtest': True, 'testinstall': False, 'unpack_sources': None, 'unversioned_packages': [], 'use_pip': True, 'use_pip_editable': False, 'use_pip_extras': None, 'use_pip_for_deps': False, 'use_pip_requirement': False, 'zipped_egg': False, 'source_urls': ['https://pypi.python.org/packages/source/%(nameletter)s/%(name)s'], 'options': {}, 'checksums': ['ffd8aabba4355a6ee55287120c02e8fb6300482970e3dbe615e07ed8102dba69']}, 'easyblock': None} | |
== 2024-04-30 15:28:14,010 templates.py:231 DEBUG version found in easyconfig is 0.6.5 | |
== 2024-04-30 15:28:14,010 templates.py:333 DEBUG name: name, config: kabuki | |
== 2024-04-30 15:28:14,010 templates.py:333 DEBUG name: version, config: 0.6.5 | |
== 2024-04-30 15:28:14,010 easyblock.py:809 INFO Considering directory in which easyconfig file is located when searching for kabuki-0.6.5.tar.gz: /tmp/eb-blmk4b4n/files_pr20440/h/HDDM | |
== 2024-04-30 15:28:14,010 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/boegelbot/easybuild/easybuild-framework/eb | |
== 2024-04-30 15:28:14,010 tools.py:290 INFO Not considering /home/boegelbot/easybuild (no easybuild/easyconfigs subdir found) | |
== 2024-04-30 15:28:14,010 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,011 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-blmk4b4n/files_pr20440/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,011 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-blmk4b4n/fake_vsc_p9b7a4n6/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,011 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/boegelbot/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,011 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.9/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,011 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-framework/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,012 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,012 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,012 tools.py:307 DEBUG Added /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2024-04-30 15:28:14,012 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python39.zip/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,012 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,012 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/lib-dynload/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,012 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,012 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,012 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,092 easyblock.py:851 INFO Found file kabuki-0.6.5.tar.gz at /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/kabuki-0.6.5.tar.gz | |
== 2024-04-30 15:28:14,092 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,095 easyblock.py:679 INFO md5 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/kabuki-0.6.5.tar.gz: af36ce32284618bf16a61f9ed0b33424 | |
== 2024-04-30 15:28:14,095 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,096 easyblock.py:679 INFO sha256 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/kabuki-0.6.5.tar.gz: ffd8aabba4355a6ee55287120c02e8fb6300482970e3dbe615e07ed8102dba69 | |
== 2024-04-30 15:28:14,096 easyblock.py:682 DEBUG Verifying checksums for extension source... | |
== 2024-04-30 15:28:14,096 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,096 filetools.py:1307 DEBUG Computed sha256 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/kabuki-0.6.5.tar.gz: ffd8aabba4355a6ee55287120c02e8fb6300482970e3dbe615e07ed8102dba69 (correct checksum: ffd8aabba4355a6ee55287120c02e8fb6300482970e3dbe615e07ed8102dba69) | |
== 2024-04-30 15:28:14,096 easyblock.py:685 INFO Checksum for extension source kabuki-0.6.5.tar.gz verified | |
== 2024-04-30 15:28:14,096 easyblock.py:532 INFO Fetched extension patches: [] | |
== 2024-04-30 15:28:14,096 easyblock.py:726 DEBUG No patches found for extension kabuki. | |
== 2024-04-30 15:28:14,096 templates.py:201 DEBUG config: {'name': 'cloudpickle', 'version': '3.0.0', 'options': {'buildcmd': None, 'check_ldshared': None, 'download_dep_fail': True, 'install_src': None, 'install_target': 'install', 'pip_ignore_installed': True, 'pip_no_index': None, 'pip_verbose': None, 'req_py_majver': None, 'req_py_minver': None, 'sanity_pip_check': True, 'runtest': True, 'testinstall': False, 'unpack_sources': None, 'unversioned_packages': [], 'use_pip': True, 'use_pip_editable': False, 'use_pip_extras': None, 'use_pip_for_deps': False, 'use_pip_requirement': False, 'zipped_egg': False, 'source_urls': ['https://pypi.python.org/packages/source/%(nameletter)s/%(name)s'], 'options': {}, 'checksums': ['996d9a482c6fb4f33c1a35335cf8afd065d2a56e973270364840712d9131a882']}, 'easyblock': None} | |
== 2024-04-30 15:28:14,096 templates.py:231 DEBUG version found in easyconfig is 3.0.0 | |
== 2024-04-30 15:28:14,096 templates.py:333 DEBUG name: name, config: cloudpickle | |
== 2024-04-30 15:28:14,097 templates.py:333 DEBUG name: version, config: 3.0.0 | |
== 2024-04-30 15:28:14,097 easyblock.py:809 INFO Considering directory in which easyconfig file is located when searching for cloudpickle-3.0.0.tar.gz: /tmp/eb-blmk4b4n/files_pr20440/h/HDDM | |
== 2024-04-30 15:28:14,097 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/boegelbot/easybuild/easybuild-framework/eb | |
== 2024-04-30 15:28:14,097 tools.py:290 INFO Not considering /home/boegelbot/easybuild (no easybuild/easyconfigs subdir found) | |
== 2024-04-30 15:28:14,097 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,097 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-blmk4b4n/files_pr20440/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,097 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-blmk4b4n/fake_vsc_p9b7a4n6/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,097 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/boegelbot/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,097 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.9/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,097 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-framework/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,097 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,097 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,097 tools.py:307 DEBUG Added /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2024-04-30 15:28:14,097 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python39.zip/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,098 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,098 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/lib-dynload/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,098 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,098 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,098 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,099 easyblock.py:851 INFO Found file cloudpickle-3.0.0.tar.gz at /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/cloudpickle-3.0.0.tar.gz | |
== 2024-04-30 15:28:14,100 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,101 easyblock.py:679 INFO md5 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/cloudpickle-3.0.0.tar.gz: 655cf0e681a77fb1d6ed0f65bb78890f | |
== 2024-04-30 15:28:14,101 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,102 easyblock.py:679 INFO sha256 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/cloudpickle-3.0.0.tar.gz: 996d9a482c6fb4f33c1a35335cf8afd065d2a56e973270364840712d9131a882 | |
== 2024-04-30 15:28:14,102 easyblock.py:682 DEBUG Verifying checksums for extension source... | |
== 2024-04-30 15:28:14,102 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,102 filetools.py:1307 DEBUG Computed sha256 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/cloudpickle-3.0.0.tar.gz: 996d9a482c6fb4f33c1a35335cf8afd065d2a56e973270364840712d9131a882 (correct checksum: 996d9a482c6fb4f33c1a35335cf8afd065d2a56e973270364840712d9131a882) | |
== 2024-04-30 15:28:14,102 easyblock.py:685 INFO Checksum for extension source cloudpickle-3.0.0.tar.gz verified | |
== 2024-04-30 15:28:14,102 easyblock.py:532 INFO Fetched extension patches: [] | |
== 2024-04-30 15:28:14,102 easyblock.py:726 DEBUG No patches found for extension cloudpickle. | |
== 2024-04-30 15:28:14,103 templates.py:201 DEBUG config: {'name': 'ssm-simulators', 'version': '0.3.0', 'options': {'buildcmd': None, 'check_ldshared': None, 'download_dep_fail': True, 'install_src': None, 'install_target': 'install', 'pip_ignore_installed': True, 'pip_no_index': None, 'pip_verbose': None, 'req_py_majver': None, 'req_py_minver': None, 'sanity_pip_check': True, 'runtest': True, 'testinstall': False, 'unpack_sources': None, 'unversioned_packages': [], 'use_pip': True, 'use_pip_editable': False, 'use_pip_extras': None, 'use_pip_for_deps': False, 'use_pip_requirement': False, 'zipped_egg': False, 'source_urls': ['https://pypi.python.org/packages/source/%(nameletter)s/%(name)s'], 'options': {}, 'modulename': 'ssms', 'checksums': ['5477025d0c2a6a7f8aa3aa336a1368ff3256d86956f1bb93d7cc507a5651a860']}, 'easyblock': None} | |
== 2024-04-30 15:28:14,103 templates.py:231 DEBUG version found in easyconfig is 0.3.0 | |
== 2024-04-30 15:28:14,103 templates.py:333 DEBUG name: name, config: ssm-simulators | |
== 2024-04-30 15:28:14,103 templates.py:333 DEBUG name: version, config: 0.3.0 | |
== 2024-04-30 15:28:14,103 easyblock.py:809 INFO Considering directory in which easyconfig file is located when searching for ssm-simulators-0.3.0.tar.gz: /tmp/eb-blmk4b4n/files_pr20440/h/HDDM | |
== 2024-04-30 15:28:14,103 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/boegelbot/easybuild/easybuild-framework/eb | |
== 2024-04-30 15:28:14,103 tools.py:290 INFO Not considering /home/boegelbot/easybuild (no easybuild/easyconfigs subdir found) | |
== 2024-04-30 15:28:14,103 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,103 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-blmk4b4n/files_pr20440/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,103 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-blmk4b4n/fake_vsc_p9b7a4n6/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,103 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/boegelbot/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,103 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.9/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,103 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-framework/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,104 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,104 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,104 tools.py:307 DEBUG Added /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2024-04-30 15:28:14,104 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python39.zip/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,104 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,104 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/lib-dynload/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,104 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,104 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,104 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,105 easyblock.py:851 INFO Found file ssm-simulators-0.3.0.tar.gz at /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/ssm-simulators-0.3.0.tar.gz | |
== 2024-04-30 15:28:14,106 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,169 easyblock.py:679 INFO md5 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/ssm-simulators-0.3.0.tar.gz: 983a0fc3d62d76e812630c579de519f2 | |
== 2024-04-30 15:28:14,169 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,170 easyblock.py:679 INFO sha256 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/ssm-simulators-0.3.0.tar.gz: 5477025d0c2a6a7f8aa3aa336a1368ff3256d86956f1bb93d7cc507a5651a860 | |
== 2024-04-30 15:28:14,170 easyblock.py:682 DEBUG Verifying checksums for extension source... | |
== 2024-04-30 15:28:14,170 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,171 filetools.py:1307 DEBUG Computed sha256 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/ssm-simulators-0.3.0.tar.gz: 5477025d0c2a6a7f8aa3aa336a1368ff3256d86956f1bb93d7cc507a5651a860 (correct checksum: 5477025d0c2a6a7f8aa3aa336a1368ff3256d86956f1bb93d7cc507a5651a860) | |
== 2024-04-30 15:28:14,171 easyblock.py:685 INFO Checksum for extension source ssm-simulators-0.3.0.tar.gz verified | |
== 2024-04-30 15:28:14,171 easyblock.py:532 INFO Fetched extension patches: [] | |
== 2024-04-30 15:28:14,171 easyblock.py:726 DEBUG No patches found for extension ssm-simulators. | |
== 2024-04-30 15:28:14,171 templates.py:201 DEBUG config: {'name': 'patsy', 'version': '0.5.6', 'options': {'buildcmd': None, 'check_ldshared': None, 'download_dep_fail': True, 'install_src': None, 'install_target': 'install', 'pip_ignore_installed': True, 'pip_no_index': None, 'pip_verbose': None, 'req_py_majver': None, 'req_py_minver': None, 'sanity_pip_check': True, 'runtest': True, 'testinstall': False, 'unpack_sources': None, 'unversioned_packages': [], 'use_pip': True, 'use_pip_editable': False, 'use_pip_extras': None, 'use_pip_for_deps': False, 'use_pip_requirement': False, 'zipped_egg': False, 'source_urls': ['https://pypi.python.org/packages/source/%(nameletter)s/%(name)s'], 'options': {}, 'checksums': ['95c6d47a7222535f84bff7f63d7303f2e297747a598db89cf5c67f0c0c7d2cdb']}, 'easyblock': None} | |
== 2024-04-30 15:28:14,171 templates.py:231 DEBUG version found in easyconfig is 0.5.6 | |
== 2024-04-30 15:28:14,171 templates.py:333 DEBUG name: name, config: patsy | |
== 2024-04-30 15:28:14,171 templates.py:333 DEBUG name: version, config: 0.5.6 | |
== 2024-04-30 15:28:14,171 easyblock.py:809 INFO Considering directory in which easyconfig file is located when searching for patsy-0.5.6.tar.gz: /tmp/eb-blmk4b4n/files_pr20440/h/HDDM | |
== 2024-04-30 15:28:14,171 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/boegelbot/easybuild/easybuild-framework/eb | |
== 2024-04-30 15:28:14,171 tools.py:290 INFO Not considering /home/boegelbot/easybuild (no easybuild/easyconfigs subdir found) | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-blmk4b4n/files_pr20440/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-blmk4b4n/fake_vsc_p9b7a4n6/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/boegelbot/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.9/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-framework/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:307 DEBUG Added /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python39.zip/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/lib-dynload/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,172 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,174 easyblock.py:851 INFO Found file patsy-0.5.6.tar.gz at /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/patsy-0.5.6.tar.gz | |
== 2024-04-30 15:28:14,174 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,176 easyblock.py:679 INFO md5 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/patsy-0.5.6.tar.gz: 9bc092cff4f71eb4e77ed4ba15e567b1 | |
== 2024-04-30 15:28:14,176 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,176 easyblock.py:679 INFO sha256 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/patsy-0.5.6.tar.gz: 95c6d47a7222535f84bff7f63d7303f2e297747a598db89cf5c67f0c0c7d2cdb | |
== 2024-04-30 15:28:14,176 easyblock.py:682 DEBUG Verifying checksums for extension source... | |
== 2024-04-30 15:28:14,176 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,177 filetools.py:1307 DEBUG Computed sha256 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/patsy-0.5.6.tar.gz: 95c6d47a7222535f84bff7f63d7303f2e297747a598db89cf5c67f0c0c7d2cdb (correct checksum: 95c6d47a7222535f84bff7f63d7303f2e297747a598db89cf5c67f0c0c7d2cdb) | |
== 2024-04-30 15:28:14,177 easyblock.py:685 INFO Checksum for extension source patsy-0.5.6.tar.gz verified | |
== 2024-04-30 15:28:14,177 easyblock.py:532 INFO Fetched extension patches: [] | |
== 2024-04-30 15:28:14,177 easyblock.py:726 DEBUG No patches found for extension patsy. | |
== 2024-04-30 15:28:14,177 templates.py:201 DEBUG config: {'name': 'HDDM', 'version': '0.9.9', 'options': {'buildcmd': None, 'check_ldshared': None, 'download_dep_fail': True, 'install_src': None, 'install_target': 'install', 'pip_ignore_installed': True, 'pip_no_index': None, 'pip_verbose': None, 'req_py_majver': None, 'req_py_minver': None, 'sanity_pip_check': True, 'runtest': True, 'testinstall': False, 'unpack_sources': None, 'unversioned_packages': [], 'use_pip': True, 'use_pip_editable': False, 'use_pip_extras': None, 'use_pip_for_deps': False, 'use_pip_requirement': False, 'zipped_egg': False, 'source_urls': ['https://pypi.python.org/packages/source/%(nameletter)s/%(name)s'], 'options': {}, 'checksums': ['2ed64db2be7acb5ef4c8b07dcf8ea4680fdfd168876be19db9cf885dd490fe5f']}, 'easyblock': None} | |
== 2024-04-30 15:28:14,177 templates.py:231 DEBUG version found in easyconfig is 0.9.9 | |
== 2024-04-30 15:28:14,177 templates.py:333 DEBUG name: name, config: HDDM | |
== 2024-04-30 15:28:14,177 templates.py:333 DEBUG name: version, config: 0.9.9 | |
== 2024-04-30 15:28:14,177 easyblock.py:809 INFO Considering directory in which easyconfig file is located when searching for HDDM-0.9.9.tar.gz: /tmp/eb-blmk4b4n/files_pr20440/h/HDDM | |
== 2024-04-30 15:28:14,178 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/boegelbot/easybuild/easybuild-framework/eb | |
== 2024-04-30 15:28:14,178 tools.py:290 INFO Not considering /home/boegelbot/easybuild (no easybuild/easyconfigs subdir found) | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-blmk4b4n/files_pr20440/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-blmk4b4n/fake_vsc_p9b7a4n6/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/boegelbot/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.9/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-framework/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:307 DEBUG Added /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python39.zip/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/lib-dynload/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,178 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,179 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,179 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.9/site-packages/easybuild/easyconfigs | |
== 2024-04-30 15:28:14,180 easyblock.py:851 INFO Found file HDDM-0.9.9.tar.gz at /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/HDDM-0.9.9.tar.gz | |
== 2024-04-30 15:28:14,180 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,274 easyblock.py:679 INFO md5 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/HDDM-0.9.9.tar.gz: 25224f8d40d06555a83ca533e281f4de | |
== 2024-04-30 15:28:14,275 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,283 easyblock.py:679 INFO sha256 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/HDDM-0.9.9.tar.gz: 2ed64db2be7acb5ef4c8b07dcf8ea4680fdfd168876be19db9cf885dd490fe5f | |
== 2024-04-30 15:28:14,283 easyblock.py:682 DEBUG Verifying checksums for extension source... | |
== 2024-04-30 15:28:14,283 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-04-30 15:28:14,290 filetools.py:1307 DEBUG Computed sha256 checksum for /project/def-maintainers/boegelbot/sources/h/HDDM/extensions/HDDM-0.9.9.tar.gz: 2ed64db2be7acb5ef4c8b07dcf8ea4680fdfd168876be19db9cf885dd490fe5f (correct checksum: 2ed64db2be7acb5ef4c8b07dcf8ea4680fdfd168876be19db9cf885dd490fe5f) | |
== 2024-04-30 15:28:14,290 easyblock.py:685 INFO Checksum for extension source HDDM-0.9.9.tar.gz verified | |
== 2024-04-30 15:28:14,291 easyblock.py:532 INFO Fetched extension patches: [] | |
== 2024-04-30 15:28:14,291 easyblock.py:726 DEBUG No patches found for extension HDDM. | |
== 2024-04-30 15:28:14,291 easyconfig.py:2640 DEBUG Determining full module name for HDDM EasyConfig @ /tmp/eb-blmk4b4n/files_pr20440/h/HDDM/HDDM-0.9.9-foss-2021b.eb (force_visible: False) | |
== 2024-04-30 15:28:14,291 easyconfig.py:2617 DEBUG No alternative software name specified to determine module name with | |
== 2024-04-30 15:28:14,291 utilities.py:115 DEBUG Module name HDDM/0.9.9-foss-2021b validated | |
== 2024-04-30 15:28:14,291 easyconfig.py:2648 DEBUG Obtained valid full module name HDDM/0.9.9-foss-2021b | |
== 2024-04-30 15:28:14,291 config.py:700 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /project/def-maintainers/boegelbot/rocky9/zen3/modules | |
== 2024-04-30 15:28:14,291 easyblock.py:2449 INFO Checking dirs that need to be created: ['/project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b', '/project/def-maintainers/boegelbot/rocky9/zen3/modules/all/HDDM', '/project/def-maintainers/boegelbot/rocky9/zen3/modules/bio/HDDM'] | |
== 2024-04-30 15:28:14,291 filetools.py:1912 INFO Creating directory /project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b (parents: True, set_gid: True, sticky: False) | |
== 2024-04-30 15:28:14,292 filetools.py:1764 INFO Adjusting permissions recursively for /project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b | |
== 2024-04-30 15:28:14,293 filetools.py:1794 DEBUG Current permissions for /project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b: 0o42755 | |
== 2024-04-30 15:28:14,293 filetools.py:1799 DEBUG Adding permissions for /project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b: 0o2000 | |
== 2024-04-30 15:28:14,293 filetools.py:1812 DEBUG Current permissions for /project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b are already OK: 0o42755 | |
== 2024-04-30 15:28:14,294 filetools.py:1931 DEBUG Not creating existing path /project/def-maintainers/boegelbot/rocky9/zen3/modules/all/HDDM | |
== 2024-04-30 15:28:14,311 filetools.py:1931 DEBUG Not creating existing path /project/def-maintainers/boegelbot/rocky9/zen3/modules/bio/HDDM | |
== 2024-04-30 15:28:14,311 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-04-30 15:28:14,311 easyblock.py:3947 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
== 2024-04-30 15:28:14,311 build_log.py:267 INFO creating build dir, resetting environment... | |
== 2024-04-30 15:28:14,311 easyblock.py:3956 INFO Starting ready step | |
== 2024-04-30 15:28:14,311 easyconfig.py:1702 INFO Generating template values... | |
== 2024-04-30 15:28:14,311 templates.py:201 DEBUG config: HDDM EasyConfig @ /tmp/eb-blmk4b4n/files_pr20440/h/HDDM/HDDM-0.9.9-foss-2021b.eb | |
== 2024-04-30 15:28:14,311 templates.py:231 DEBUG version found in easyconfig is 0.9.9 | |
== 2024-04-30 15:28:14,312 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,312 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,312 templates.py:333 DEBUG name: name, config: HDDM | |
== 2024-04-30 15:28:14,312 templates.py:333 DEBUG name: parallel, config: None | |
== 2024-04-30 15:28:14,312 templates.py:333 DEBUG name: version, config: 0.9.9 | |
== 2024-04-30 15:28:14,312 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-04-30 15:28:14,312 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-04-30 15:28:14,312 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2024-04-30 15:28:14,312 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2024-04-30 15:28:14,312 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='hddm', builddir='/tmp/boegelbot/HDDM/0.9.9/foss-2021b', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='hddm', installdir='/project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b', module_name='HDDM/0.9.9-foss-2021b', mpi_cmd_prefix='mpirun -n 1', name='HDDM', nameletter='H', nameletterlower='h', namelower='hddm', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021b', version='0.9.9', version_major='0', version_major_minor='0.9', version_minor='9', versionprefix='', versionsuffix='' | |
== 2024-04-30 15:28:14,312 easyblock.py:3964 INFO Running method check_readiness_step part of step ready | |
== 2024-04-30 15:28:14,312 easyblock.py:2249 DEBUG Desired parallelism specified via 'parallel' build option: None | |
== 2024-04-30 15:28:14,312 easyblock.py:2258 INFO Setting parallelism: 8 | |
== 2024-04-30 15:28:14,313 modules.py:812 DEBUG Current MODULEPATH: /project/def-maintainers/boegelbot/rocky9/zen3/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core | |
== 2024-04-30 15:28:14,313 modules.py:821 DEBUG Changing LD_LIBRARY_PATH from '/opt/software/slurm/lib64' to '/opt/software/slurm/lib64:/opt/software/slurm/lib64' in environment for module command | |
== 2024-04-30 15:28:14,313 modules.py:826 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python --terse list' from /home/boegelbot/boegelbot | |
== 2024-04-30 15:28:14,356 modules.py:833 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python --terse list': stdout: import os | |
os.environ["MODULEPATH"] = "/project/def-maintainers/boegelbot/rocky9/zen3/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core"; | |
os.environ["_ModuleTable001_"] = "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"; | |
os.environ["_ModuleTable002_"] = "cmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsCn0K"; | |
os.environ["_ModuleTable_Sz_"] = "2"; | |
_mlstatus = True | |
; stderr: No modules loaded | |
== 2024-04-30 15:28:14,356 modules.py:1469 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python --terse list' ran fine | |
== 2024-04-30 15:28:14,357 easyblock.py:3964 INFO Running method make_builddir part of step ready | |
== 2024-04-30 15:28:14,357 easyblock.py:1066 DEBUG Creating the build directory /tmp/boegelbot/HDDM/0.9.9/foss-2021b (cleanup: True) | |
== 2024-04-30 15:28:14,357 filetools.py:1912 INFO Creating directory /tmp/boegelbot/HDDM/0.9.9/foss-2021b (parents: True, set_gid: True, sticky: False) | |
== 2024-04-30 15:28:14,358 filetools.py:1764 INFO Adjusting permissions recursively for /tmp/boegelbot/HDDM | |
== 2024-04-30 15:28:14,358 filetools.py:1794 DEBUG Current permissions for /tmp/boegelbot/HDDM: 0o42755 | |
== 2024-04-30 15:28:14,358 filetools.py:1799 DEBUG Adding permissions for /tmp/boegelbot/HDDM: 0o2000 | |
== 2024-04-30 15:28:14,358 filetools.py:1812 DEBUG Current permissions for /tmp/boegelbot/HDDM are already OK: 0o42755 | |
== 2024-04-30 15:28:14,358 filetools.py:1794 DEBUG Current permissions for /tmp/boegelbot/HDDM/0.9.9: 0o42755 | |
== 2024-04-30 15:28:14,358 filetools.py:1799 DEBUG Adding permissions for /tmp/boegelbot/HDDM/0.9.9: 0o2000 | |
== 2024-04-30 15:28:14,358 filetools.py:1812 DEBUG Current permissions for /tmp/boegelbot/HDDM/0.9.9 are already OK: 0o42755 | |
== 2024-04-30 15:28:14,358 filetools.py:1794 DEBUG Current permissions for /tmp/boegelbot/HDDM/0.9.9/foss-2021b: 0o42755 | |
== 2024-04-30 15:28:14,358 filetools.py:1799 DEBUG Adding permissions for /tmp/boegelbot/HDDM/0.9.9/foss-2021b: 0o2000 | |
== 2024-04-30 15:28:14,358 filetools.py:1812 DEBUG Current permissions for /tmp/boegelbot/HDDM/0.9.9/foss-2021b are already OK: 0o42755 | |
== 2024-04-30 15:28:14,358 easyblock.py:3964 INFO Running method reset_env part of step ready | |
== 2024-04-30 15:28:14,359 easyblock.py:3964 INFO Running method handle_iterate_opts part of step ready | |
== 2024-04-30 15:28:14,359 easyconfig.py:1702 INFO Generating template values... | |
== 2024-04-30 15:28:14,359 templates.py:201 DEBUG config: HDDM EasyConfig @ /tmp/eb-blmk4b4n/files_pr20440/h/HDDM/HDDM-0.9.9-foss-2021b.eb | |
== 2024-04-30 15:28:14,359 templates.py:231 DEBUG version found in easyconfig is 0.9.9 | |
== 2024-04-30 15:28:14,359 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,359 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,359 templates.py:333 DEBUG name: name, config: HDDM | |
== 2024-04-30 15:28:14,359 templates.py:333 DEBUG name: parallel, config: 8 | |
== 2024-04-30 15:28:14,359 templates.py:333 DEBUG name: version, config: 0.9.9 | |
== 2024-04-30 15:28:14,359 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-04-30 15:28:14,359 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-04-30 15:28:14,360 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2024-04-30 15:28:14,360 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2024-04-30 15:28:14,360 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='hddm', builddir='/tmp/boegelbot/HDDM/0.9.9/foss-2021b', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='hddm', installdir='/project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b', module_name='HDDM/0.9.9-foss-2021b', mpi_cmd_prefix='mpirun -n 1', name='HDDM', nameletter='H', nameletterlower='h', namelower='hddm', parallel='8', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021b', version='0.9.9', version_major='0', version_major_minor='0.9', version_minor='9', versionprefix='', versionsuffix='' | |
== 2024-04-30 15:28:14,360 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-04-30 15:28:14,360 easyblock.py:3947 DEBUG Not skipping source step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
== 2024-04-30 15:28:14,360 build_log.py:267 INFO unpacking... | |
== 2024-04-30 15:28:14,360 easyblock.py:3956 INFO Starting source step | |
== 2024-04-30 15:28:14,360 easyconfig.py:1702 INFO Generating template values... | |
== 2024-04-30 15:28:14,360 templates.py:201 DEBUG config: HDDM EasyConfig @ /tmp/eb-blmk4b4n/files_pr20440/h/HDDM/HDDM-0.9.9-foss-2021b.eb | |
== 2024-04-30 15:28:14,360 templates.py:231 DEBUG version found in easyconfig is 0.9.9 | |
== 2024-04-30 15:28:14,360 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,361 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,361 templates.py:333 DEBUG name: name, config: HDDM | |
== 2024-04-30 15:28:14,361 templates.py:333 DEBUG name: parallel, config: 8 | |
== 2024-04-30 15:28:14,361 templates.py:333 DEBUG name: version, config: 0.9.9 | |
== 2024-04-30 15:28:14,361 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-04-30 15:28:14,361 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-04-30 15:28:14,361 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2024-04-30 15:28:14,361 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2024-04-30 15:28:14,361 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='hddm', builddir='/tmp/boegelbot/HDDM/0.9.9/foss-2021b', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='hddm', installdir='/project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b', module_name='HDDM/0.9.9-foss-2021b', mpi_cmd_prefix='mpirun -n 1', name='HDDM', nameletter='H', nameletterlower='h', namelower='hddm', parallel='8', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021b', version='0.9.9', version_major='0', version_major_minor='0.9', version_minor='9', versionprefix='', versionsuffix='' | |
== 2024-04-30 15:28:14,361 easyblock.py:3964 INFO Running method checksum_step part of step source | |
== 2024-04-30 15:28:14,361 easyblock.py:3964 INFO Running method extract_step part of step source | |
== 2024-04-30 15:28:14,361 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-04-30 15:28:14,361 easyblock.py:3947 DEBUG Not skipping patch step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
== 2024-04-30 15:28:14,361 build_log.py:267 INFO patching... | |
== 2024-04-30 15:28:14,362 easyblock.py:3956 INFO Starting patch step | |
== 2024-04-30 15:28:14,362 easyconfig.py:1702 INFO Generating template values... | |
== 2024-04-30 15:28:14,362 templates.py:201 DEBUG config: HDDM EasyConfig @ /tmp/eb-blmk4b4n/files_pr20440/h/HDDM/HDDM-0.9.9-foss-2021b.eb | |
== 2024-04-30 15:28:14,362 templates.py:231 DEBUG version found in easyconfig is 0.9.9 | |
== 2024-04-30 15:28:14,362 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,362 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,362 templates.py:333 DEBUG name: name, config: HDDM | |
== 2024-04-30 15:28:14,362 templates.py:333 DEBUG name: parallel, config: 8 | |
== 2024-04-30 15:28:14,362 templates.py:333 DEBUG name: version, config: 0.9.9 | |
== 2024-04-30 15:28:14,362 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-04-30 15:28:14,362 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-04-30 15:28:14,362 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2024-04-30 15:28:14,362 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2024-04-30 15:28:14,363 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='hddm', builddir='/tmp/boegelbot/HDDM/0.9.9/foss-2021b', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='hddm', installdir='/project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b', module_name='HDDM/0.9.9-foss-2021b', mpi_cmd_prefix='mpirun -n 1', name='HDDM', nameletter='H', nameletterlower='h', namelower='hddm', parallel='8', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021b', version='0.9.9', version_major='0', version_major_minor='0.9', version_minor='9', versionprefix='', versionsuffix='' | |
== 2024-04-30 15:28:14,363 easyblock.py:3964 INFO Running method patch_step part of step patch | |
== 2024-04-30 15:28:14,363 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-04-30 15:28:14,363 easyblock.py:3947 DEBUG Not skipping prepare step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
== 2024-04-30 15:28:14,363 build_log.py:267 INFO preparing... | |
== 2024-04-30 15:28:14,363 easyblock.py:3956 INFO Starting prepare step | |
== 2024-04-30 15:28:14,363 easyconfig.py:1702 INFO Generating template values... | |
== 2024-04-30 15:28:14,363 templates.py:201 DEBUG config: HDDM EasyConfig @ /tmp/eb-blmk4b4n/files_pr20440/h/HDDM/HDDM-0.9.9-foss-2021b.eb | |
== 2024-04-30 15:28:14,363 templates.py:231 DEBUG version found in easyconfig is 0.9.9 | |
== 2024-04-30 15:28:14,363 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,363 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-04-30 15:28:14,363 templates.py:333 DEBUG name: name, config: HDDM | |
== 2024-04-30 15:28:14,363 templates.py:333 DEBUG name: parallel, config: 8 | |
== 2024-04-30 15:28:14,363 templates.py:333 DEBUG name: version, config: 0.9.9 | |
== 2024-04-30 15:28:14,363 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-04-30 15:28:14,364 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-04-30 15:28:14,364 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI' | |
== 2024-04-30 15:28:14,364 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'}) | |
== 2024-04-30 15:28:14,364 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='hddm', builddir='/tmp/boegelbot/HDDM/0.9.9/foss-2021b', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', github_account='hddm', installdir='/project/def-maintainers/boegelbot/rocky9/zen3/software/HDDM/0.9.9-foss-2021b', module_name='HDDM/0.9.9-foss-2021b', mpi_cmd_prefix='mpirun -n 1', name='HDDM', nameletter='H', nameletterlower='h', namelower='hddm', parallel='8', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2021b', version='0.9.9', version_major='0', version_major_minor='0.9', version_minor='9', versionprefix='', versionsuffix='' | |
== 2024-04-30 15:28:14,364 easyblock.py:3964 INFO Running method prepare_step part of step prepare | |
== 2024-04-30 15:28:14,364 easyconfig.py:2708 DEBUG Determining initial module paths for HDDM EasyConfig @ /tmp/eb-blmk4b4n/files_pr20440/h/HDDM/HDDM-0.9.9-foss-2021b.eb | |
== 2024-04-30 15:28:14,364 easyconfig.py:2710 DEBUG Obtained initial module paths: [] | |
== 2024-04-30 15:28:14,364 easyconfig.py:1135 DEBUG Dependencies BEFORE filtering: [{'full_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'short_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'name': 'Python', 'version': '3.9.6', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'SciPy-bundle/2021.10-foss-2021b', 'short_mod_name': 'SciPy-bundle/2021.10-foss-2021b', 'name': 'SciPy-bundle', 'version': '2021.10', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'Seaborn/0.11.2-foss-2021b', 'short_mod_name': 'Seaborn/0.11.2-foss-2021b', 'name': 'Seaborn', 'version': '0.11.2', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'statsmodels/0.13.1-foss-2021b', 'short_mod_name': 'statsmodels/0.13.1-foss-2021b', 'name': 'statsmodels', 'version': '0.13.1', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'scikit-learn/1.0.1-foss-2021b', 'short_mod_name': 'scikit-learn/1.0.1-foss-2021b', 'name': 'scikit-learn', 'version': '1.0.1', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'tqdm/4.62.3-GCCcore-11.2.0', 'short_mod_name': 'tqdm/4.62.3-GCCcore-11.2.0', 'name': 'tqdm', 'version': '4.62.3', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'PyMC/2.3.8-foss-2021b', 'short_mod_name': 'PyMC/2.3.8-foss-2021b', 'name': 'PyMC', 'version': '2.3.8', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'ArviZ/0.11.4-foss-2021b', 'short_mod_name': 'ArviZ/0.11.4-foss-2021b', 'name': 'ArviZ', 'version': '0.11.4', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'PyTorch/1.12.1-foss-2021b', 'short_mod_name': 'PyTorch/1.12.1-foss-2021b', 'name': 'PyTorch', 'version': '1.12.1', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}] | |
== 2024-04-30 15:28:14,365 easyconfig.py:1138 DEBUG Dependencies AFTER filtering: [{'full_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'short_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'name': 'Python', 'version': '3.9.6', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'SciPy-bundle/2021.10-foss-2021b', 'short_mod_name': 'SciPy-bundle/2021.10-foss-2021b', 'name': 'SciPy-bundle', 'version': '2021.10', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'Seaborn/0.11.2-foss-2021b', 'short_mod_name': 'Seaborn/0.11.2-foss-2021b', 'name': 'Seaborn', 'version': '0.11.2', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'statsmodels/0.13.1-foss-2021b', 'short_mod_name': 'statsmodels/0.13.1-foss-2021b', 'name': 'statsmodels', 'version': '0.13.1', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'scikit-learn/1.0.1-foss-2021b', 'short_mod_name': 'scikit-learn/1.0.1-foss-2021b', 'name': 'scikit-learn', 'version': '1.0.1', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'tqdm/4.62.3-GCCcore-11.2.0', 'short_mod_name': 'tqdm/4.62.3-GCCcore-11.2.0', 'name': 'tqdm', 'version': '4.62.3', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'PyMC/2.3.8-foss-2021b', 'short_mod_name': 'PyMC/2.3.8-foss-2021b', 'name': 'PyMC', 'version': '2.3.8', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'ArviZ/0.11.4-foss-2021b', 'short_mod_name': 'ArviZ/0.11.4-foss-2021b', 'name': 'ArviZ', 'version': '0.11.4', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'PyTorch/1.12.1-foss-2021b', 'short_mod_name': 'PyTorch/1.12.1-foss-2021b', 'name': 'PyTorch', 'version': '1.12.1', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}] | |
== 2024-04-30 15:28:14,365 toolchain.py:527 DEBUG _check_dependencies: adding toolchain dependencies [{'full_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'short_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'name': 'Python', 'version': '3.9.6', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'SciPy-bundle/2021.10-foss-2021b', 'short_mod_name': 'SciPy-bundle/2021.10-foss-2021b', 'name': 'SciPy-bundle', 'version': '2021.10', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'Seaborn/0.11.2-foss-2021b', 'short_mod_name': 'Seaborn/0.11.2-foss-2021b', 'name': 'Seaborn', 'version': '0.11.2', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'statsmodels/0.13.1-foss-2021b', 'short_mod_name': 'statsmodels/0.13.1-foss-2021b', 'name': 'statsmodels', 'version': '0.13.1', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'scikit-learn/1.0.1-foss-2021b', 'short_mod_name': 'scikit-learn/1.0.1-foss-2021b', 'name': 'scikit-learn', 'version': '1.0.1', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'tqdm/4.62.3-GCCcore-11.2.0', 'short_mod_name': 'tqdm/4.62.3-GCCcore-11.2.0', 'name': 'tqdm', 'version': '4.62.3', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'PyMC/2.3.8-foss-2021b', 'short_mod_name': 'PyMC/2.3.8-foss-2021b', 'name': 'PyMC', 'version': '2.3.8', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'ArviZ/0.11.4-foss-2021b', 'short_mod_name': 'ArviZ/0.11.4-foss-2021b', 'name': 'ArviZ', 'version': '0.11.4', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'PyTorch/1.12.1-foss-2021b', 'short_mod_name': 'PyTorch/1.12.1-foss-2021b', 'name': 'PyTorch', 'version': '1.12.1', 'versionsuffix': '', 'toolchain': {'name': 'foss', 'version': '2021b'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}] | |
== 2024-04-30 15:28:14,365 toolchain.py:537 DEBUG _check_dependencies: MODULEPATH: /project/def-maintainers/boegelbot/rocky9/zen3/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core | |
== 2024-04-30 15:28:14,365 modules.py:490 DEBUG Found cached result for 'module avail' with key '('MODULEPATH=/project/def-maintainers/boegelbot/rocky9/zen3/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core', 'lmod', '--show-hidden')': ['4ti2/1.6.9-GCC-11.3.0', 'ABINIT/9.6.2-foss-2022a', 'ABySS/2.3.7-foss-2023a', 'AFNI/24.0.02-foss-2023a', 'AICSImageIO/4.14.0-foss-2022a', 'AMICA/2024.1.19-intel-2023a', 'AMOS/3.1.0-foss-2021b', 'AMOS/3.1.0-foss-2023a', 'AMPtk/1.5.4-foss-2021b', 'AMRFinderPlus/3.11.18-gompi-2021b', 'ANIcalculator/1.0-GCCcore-11.3.0', 'ANTIC/0.2.5-gfbf-2022a', 'ANTLR/2.7.7-GCCcore-10.3.0-Java-11', 'ANTLR/2.7.7-GCCcore-11.3.0-Java-11', 'AOFlagger/3.4.0-foss-2022a', 'AOFlagger/3.4.0-foss-2023b', 'ASAP3/3.13.2-foss-2023a', 'ASAP3/3.13.3-foss-2023a', 'ASAP3/3.13.3-intel-2023a', 'ASCAT/3.1.2-foss-2022a-R-4.2.1', 'ASE/3.22.1-foss-2022a', 'ASE/3.22.1-gfbf-2023a', 'ASE/3.22.1-iimkl-2023a', 'ASE/3.22.1-intel-2022a', 'ASF-SearchAPI/6.5.0-foss-2022a', 'ATK/2.36.0-GCCcore-10.3.0', 'ATK/2.36.0-GCCcore-11.2.0', 'ATK/2.38.0-GCCcore-11.3.0', 'ATK/2.38.0-GCCcore-12.2.0', 'ATK/2.38.0-GCCcore-12.3.0', 'ATK/2.38.0-GCCcore-13.2.0', 'AUGUSTUS/3.4.0-foss-2021b', 'AUGUSTUS/3.5.0-foss-2022a', 'Abseil/20210324.2-GCCcore-11.2.0', 'Abseil/20230125.2-GCCcore-11.3.0', 'Abseil/20230125.2-GCCcore-12.2.0', 'Abseil/20230125.3-GCCcore-12.3.0', 'Abseil/20240116.1-GCCcore-13.2.0', 'AdapterRemoval/2.3.3-GCC-11.3.0', 'Albumentations/1.3.0-foss-2022a', 'Albumentations/1.3.0-foss-2022a-CUDA-11.7.0', 'AmberTools/22.3-foss-2021b', 'Anaconda2/2019.10', 'Anaconda3/2023.09-0', 'Annocript/2.0-foss-2022a', 'Arb/2.22.1-foss-2021b', 'Arb/2.23.0-gfbf-2022a', 'Arcade-Learning-Environment/0.7.3-foss-2021b', 'Arcade-Learning-Environment/0.8.1-foss-2022a', 'ArchR/1.0.2-foss-2023a-R-4.3.2', 'Archive-Zip/1.68-GCCcore-12.2.0', 'Armadillo/11.4.3-foss-2022a', 'Armadillo/11.4.3-foss-2022b', 'Armadillo/12.6.2-foss-2023a', 'Armadillo/12.8.0-foss-2023b', 'Arrow/11.0.0-gfbf-2022b', 'Arrow/14.0.1-gfbf-2023a', 'Arrow/6.0.0-foss-2021a', 'Arrow/6.0.0-foss-2021b', 'Arrow/6.0.1-foss-2021a', 'Arrow/8.0.0-foss-2021a', 'Arrow/8.0.0-foss-2021b', 'Arrow/8.0.0-foss-2022.05', 'Arrow/8.0.0-foss-2022a', 'ArviZ/0.11.4-foss-2021b', 'ArviZ/0.16.1-foss-2023a', 'AutoDock-Vina/1.2.3-foss-2021b', 'Autoconf/2.69-GCCcore-10.2.0', 'Autoconf/2.69-GCCcore-9.3.0', 'Autoconf/2.71', 'Autoconf/2.71-GCCcore-10.3.0', 'Autoconf/2.71-GCCcore-11.2.0', 'Autoconf/2.71-GCCcore-11.3.0', 'Autoconf/2.71-GCCcore-12.2.0', 'Autoconf/2.71-GCCcore-12.3.0', 'Autoconf/2.71-GCCcore-13.2.0', 'Automake/1.16.1-GCCcore-9.3.0', 'Automake/1.16.2-GCCcore-10.2.0', 'Automake/1.16.3-GCCcore-10.3.0', 'Automake/1.16.4-GCCcore-11.2.0', 'Automake/1.16.5', 'Automake/1.16.5-GCCcore-11.3.0', 'Automake/1.16.5-GCCcore-12.2.0', 'Automake/1.16.5-GCCcore-12.3.0', 'Automake/1.16.5-GCCcore-13.2.0', 'Autotools/20180311-GCCcore-9.3.0', 'Autotools/20200321-GCCcore-10.2.0', 'Autotools/20210128-GCCcore-10.3.0', 'Autotools/20210726-GCCcore-11.2.0', 'Autotools/20220317', 'Autotools/20220317-GCCcore-11.3.0', 'Autotools/20220317-GCCcore-12.2.0', 'Autotools/20220317-GCCcore-12.3.0', 'Autotools/20220317-GCCcore-13.2.0', 'BBMap/39.01-GCC-11.3.0', 'BBMap/39.01-GCC-12.2.0', 'BCFtools/1.12-GCC-10.3.0', 'BCFtools/1.14-GCC-11.2.0', 'BCFtools/1.15.1-GCC-11.3.0', 'BCFtools/1.17-GCC-12.2.0', 'BCFtools/1.18-GCC-12.3.0', 'BCFtools/1.19-GCC-13.2.0', 'BEDOPS/2.4.41-foss-2021b', 'BEDTools/2.30.0-GCC-11.2.0', 'BEDTools/2.30.0-GCC-11.3.0', 'BEDTools/2.30.0-GCC-12.2.0', 'BEDTools/2.31.0-GCC-12.3.0', 'BLAST+/2.11.0-gompi-2021a', 'BLAST+/2.12.0-gompi-2021b', 'BLAST+/2.13.0-gompi-2022a', 'BLAST+/2.14.1-gompi-2023a', 'BLAST+/2.9.0-gompi-2021b', 'BLAT/3.7-GCC-11.2.0', 'BLAT/3.7-GCC-11.3.0', 'BLIS/0.8.1-GCC-10.3.0', 'BLIS/0.8.1-GCC-11.2.0', 'BLIS/0.9.0-GCC-11.3.0', 'BLIS/0.9.0-GCC-12.2.0', 'BLIS/0.9.0-GCC-12.3.0', 'BLIS/0.9.0-GCC-13.2.0', 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'smithwaterman/20160702-GCCcore-11.3.0', 'snakemake/6.10.0-foss-2021b', 'snakemake/7.18.2-foss-2021b', 'snakemake/7.22.0-foss-2022a', 'snakemake/7.32.3-foss-2022b', 'snakemake/8.2.1-foss-2023a', 'snakemake/8.4.2-foss-2023a', 'snappy/1.1.10-GCCcore-12.3.0', 'snappy/1.1.10-GCCcore-13.2.0', 'snappy/1.1.8-GCCcore-10.3.0', 'snappy/1.1.9-GCCcore-11.2.0', 'snappy/1.1.9-GCCcore-11.3.0', 'snappy/1.1.9-GCCcore-12.2.0', 'snippy/4.6.0-foss-2021b-R-4.1.2', 'snp-sites/2.5.1-GCCcore-11.2.0', 'snpEff/5.0e-GCCcore-11.2.0-Java-11', 'sonic/20180202-gfbf-2023a', 'spaCy/3.4.4-foss-2022a', 'spaln/2.4.12-GCC-11.2.0', 'spaln/2.4.13f-GCC-11.3.0', 'sparse-neighbors-search/0.7-foss-2022a', 'sparsehash/2.0.4-GCCcore-11.3.0', 'sparsehash/2.0.4-GCCcore-12.3.0', 'spdlog/1.9.2-GCCcore-10.3.0', 'speech_tools/2.5.0-GCCcore-12.3.0', 'spglib-python/2.0.0-foss-2022a', 'spglib-python/2.0.0-intel-2022a', 'spglib-python/2.0.2-gfbf-2022b', 'spglib-python/2.1.0-gfbf-2023a', 'spglib-python/2.1.0-iimkl-2023a', 'spglib/2.0.2-GCCcore-11.3.0', 'spglib/2.0.2-GCCcore-12.2.0', 'spoa/4.0.7-GCC-10.3.0', 'spoa/4.0.7-GCC-11.2.0', 'spoa/4.0.7-GCC-11.3.0', 'spoa/4.0.7-GCC-12.2.0', 'spoa/4.1.0-GCC-12.3.0', 'starparser/1.49-foss-2022a', 'statsmodels/0.13.1-foss-2021b', 'statsmodels/0.13.1-foss-2022a', 'statsmodels/0.14.0-gfbf-2022b', 'statsmodels/0.14.1-gfbf-2023a', 'stringmagic/1.0.0-foss-2023a-R-4.3.2', 'subunit/1.4.3-GCCcore-12.2.0', 'sympy/1.10.1-foss-2022a', 'sympy/1.10.1-intel-2022a', 'sympy/1.11.1-foss-2022a', 'sympy/1.11.1-intel-2022a', 'sympy/1.12-gfbf-2022b', 'sympy/1.12-gfbf-2023a', 'sympy/1.12-gfbf-2023b', 'sympy/1.9-foss-2021b', 'tabixpp/1.1.0-GCC-10.3.0', 'tabixpp/1.1.0-GCC-11.2.0', 'tabixpp/1.1.2-GCC-11.3.0', 'tbb/2020.1-GCCcore-12.3.0', 'tbb/2020.3-GCCcore-10.3.0', 'tbb/2020.3-GCCcore-11.2.0', 'tbb/2020.3-GCCcore-12.3.0', 'tbb/2021.10.0-GCCcore-12.2.0', 'tbb/2021.11.0-GCCcore-12.3.0', 'tbb/2021.5.0-GCCcore-11.3.0', 'tbl2asn/20220427-linux64', 'tbl2asn/20230713-linux64', 'tcsh/6.24.01-GCCcore-11.3.0', 'tcsh/6.24.07-GCCcore-12.2.0', 'tcsh/6.24.10-GCCcore-12.3.0', 'tensorboard/2.10.0-foss-2022a', 'tensorboard/2.15.1-gfbf-2023a', 'tensorboardX/2.5.1-foss-2022a', 'tensorboardX/2.6.2.2-foss-2023a', 'tensorflow-probability/0.20.0-foss-2023a', 'tesseract/5.3.0-GCCcore-11.3.0', 'thirdorder/1.1.1-foss-2022a', 'tiktoken/0.6.0-GCCcore-12.3.0', 'time/1.9-GCCcore-11.3.0', 'time/1.9-GCCcore-12.2.0', 'tokenizers/0.13.3-GCCcore-12.2.0', 'torchvision/0.13.1-foss-2022a', 'torchvision/0.16.0-foss-2023a', 'tornado/6.3.2-GCCcore-12.3.0', 'tqdm/4.61.2-GCCcore-10.3.0', 'tqdm/4.62.3-GCCcore-11.2.0', 'tqdm/4.64.0-GCCcore-11.3.0', 'tqdm/4.64.1-GCCcore-12.2.0', 'tqdm/4.66.1-GCCcore-12.3.0', 'tqdm/4.66.2-GCCcore-13.2.0', 'trimAl/1.4.1-GCCcore-11.3.0', 'trimAl/1.4.1-GCCcore-12.3.0', 'trimesh/3.17.1-foss-2022a', 'trimesh/3.21.5-gfbf-2022b', 'tseriesEntropy/0.6-0-foss-2022a-R-4.2.1', 'typing-extensions/3.10.0.0-GCCcore-10.3.0', 'typing-extensions/3.10.0.2-GCCcore-11.2.0', 'typing-extensions/4.10.0-GCCcore-13.2.0', 'typing-extensions/4.3.0-GCCcore-11.3.0', 'typing-extensions/4.8.0-GCCcore-12.3.0', 'typing-extensions/4.9.0-GCCcore-12.2.0', 'typing-extensions/4.9.0-GCCcore-12.3.0', 'umap-learn/0.5.3-foss-2021b', 'umap-learn/0.5.3-foss-2022a', 'umap-learn/0.5.5-foss-2023a', 'uncertainties/3.1.7-foss-2021b', 'uncertainties/3.1.7-foss-2023a', 'unifdef/2.12-GCCcore-11.3.0', 'unimap/0.1-GCCcore-11.3.0', 'utf8proc/2.6.1-GCCcore-10.3.0', 'utf8proc/2.6.1-GCCcore-11.2.0', 'utf8proc/2.7.0-GCCcore-11.3.0', 'utf8proc/2.8.0-GCCcore-12.2.0', 'utf8proc/2.8.0-GCCcore-12.3.0', 'util-linux/2.35-GCCcore-9.3.0', 'util-linux/2.36-GCCcore-10.2.0', 'util-linux/2.36-GCCcore-10.3.0', 'util-linux/2.37-GCCcore-11.2.0', 'util-linux/2.38-GCCcore-11.3.0', 'util-linux/2.38.1-GCCcore-12.2.0', 'util-linux/2.39-GCCcore-12.3.0', 'util-linux/2.39-GCCcore-13.2.0', 'vConTACT2/0.11.3-foss-2022a', 'vcflib/1.0.3-foss-2021b-R-4.1.2', 'vcflib/1.0.9-foss-2022a-R-4.2.1', 'velocyto/0.17.17-foss-2022a', 'virtualenv/20.23.1-GCCcore-12.3.0', 'virtualenv/20.24.6-GCCcore-13.2.0', 'visdom/0.2.4-foss-2022a', 'vispr/0.4.14-foss-2022a', 'vitessce-python/20230222-foss-2022a', 'vitessceR/0.99.0-20230110-foss-2022a-R-4.2.1', 'vt/0.57721-GCC-11.2.0', 'waLBerla/6.1-foss-2022b', 'wandb/0.13.4-GCCcore-11.3.0', 'wandb/0.16.1-GCC-12.3.0', 'wget/1.21.1-GCCcore-10.3.0', 'wget/1.21.2-GCCcore-11.2.0', 'wget/1.21.3-GCCcore-11.3.0', 'wget/1.21.4-GCCcore-13.2.0', 'wgsim/20111017-GCC-11.2.0', 'wpebackend-fdo/1.13.1-GCCcore-11.2.0', 'wpebackend-fdo/1.14.1-GCCcore-11.3.0', 'wrapt/1.15.0-foss-2022a', 'wrapt/1.15.0-gfbf-2022b', 'wrapt/1.15.0-gfbf-2023a', 'wrapt/1.15.0-intel-2022a', 'wxPython/4.2.1-foss-2022a', 'wxWidgets/3.1.5-GCC-10.3.0', 'wxWidgets/3.2.0-GCC-11.2.0', 'wxWidgets/3.2.1-GCC-11.3.0', 'wxWidgets/3.2.2.1-GCC-12.2.0', 'wxWidgets/3.2.2.1-GCC-12.3.0', 'x264/20210414-GCCcore-10.3.0', 'x264/20210613-GCCcore-11.2.0', 'x264/20220620-GCCcore-11.3.0', 'x264/20230226-GCCcore-12.2.0', 'x264/20230226-GCCcore-12.3.0', 'x264/20231019-GCCcore-13.2.0', 'x265/3.5-GCCcore-10.3.0', 'x265/3.5-GCCcore-11.2.0', 'x265/3.5-GCCcore-11.3.0', 'x265/3.5-GCCcore-12.2.0', 'x265/3.5-GCCcore-12.3.0', 'x265/3.5-GCCcore-13.2.0', 'xarray/0.20.1-foss-2021b', 'xarray/2022.6.0-foss-2022a', 'xarray/2023.4.2-gfbf-2022b', 'xarray/2023.8.0-gfbf-2023a', 'xarray/2023.9.0-gfbf-2023a', 'xorg-macros/1.19.2-GCCcore-10.2.0', 'xorg-macros/1.19.2-GCCcore-9.3.0', 'xorg-macros/1.19.3-GCCcore-10.3.0', 'xorg-macros/1.19.3-GCCcore-11.2.0', 'xorg-macros/1.19.3-GCCcore-11.3.0', 'xorg-macros/1.19.3-GCCcore-12.2.0', 'xorg-macros/1.20.0-GCCcore-12.3.0', 'xorg-macros/1.20.0-GCCcore-13.2.0', 'xpdf/4.04-GCCcore-12.3.0', 'xprop/1.2.5-GCCcore-10.3.0', 'xprop/1.2.5-GCCcore-11.3.0', 'xprop/1.2.6-GCCcore-12.3.0', 'xtb/6.4.1-foss-2021b', 'xtb/6.4.1-intel-2021a', 'xtb/6.5.0-foss-2021b', 'xtb/6.6.0-foss-2022a', 'xtb/6.6.1-gfbf-2023a', 'xtb/6.7.0-gfbf-2023a', 'xtensor/0.24.0-foss-2021b', 'xxHash/0.8.2-GCCcore-12.3.0', 'xxd/8.2.4220-GCCcore-10.3.0', 'xxd/8.2.4220-GCCcore-11.2.0', 'xxd/8.2.4220-GCCcore-11.3.0', 'xxd/9.0.1696-GCCcore-12.2.0', 'xxd/9.0.2112-GCCcore-12.3.0', 'xxd/9.1.0307-GCCcore-13.2.0', 'yaff/1.6.0-foss-2023a', 'yaml-cpp/0.7.0-GCCcore-11.3.0', 'yaml-cpp/0.7.0-GCCcore-12.3.0', 'yt/4.3.0-foss-2022a', 'zUMIs/2.9.7-foss-2023a-R-4.3.2', 'zarr/2.13.3-foss-2021b', 'zarr/2.13.3-foss-2022a', 'zarr/2.17.1-foss-2023a', 'zfp/1.0.0-GCCcore-11.3.0', 'zlib-ng/2.0.7-GCCcore-11.3.0', 'zlib/1.2.11', 'zlib/1.2.11-GCCcore-10.2.0', 'zlib/1.2.11-GCCcore-10.3.0', 'zlib/1.2.11-GCCcore-11.2.0', 'zlib/1.2.11-GCCcore-9.3.0', 'zlib/1.2.12', 'zlib/1.2.12-GCCcore-11.3.0', 'zlib/1.2.12-GCCcore-12.2.0', 'zlib/1.2.13', 'zlib/1.2.13-GCCcore-12.3.0', 'zlib/1.2.13-GCCcore-13.1.0', 'zlib/1.2.13-GCCcore-13.2.0', 'zstd/1.4.4-GCCcore-9.3.0', 'zstd/1.4.5-GCCcore-10.2.0', 'zstd/1.4.9-GCCcore-10.3.0', 'zstd/1.5.0-GCCcore-11.2.0', 'zstd/1.5.2-GCCcore-11.3.0', 'zstd/1.5.2-GCCcore-12.2.0', 'zstd/1.5.5-GCCcore-12.3.0', 'zstd/1.5.5-GCCcore-13.2.0'] | |
== 2024-04-30 15:28:14,368 modules.py:626 INFO Checking whether Python/3.9.6-GCCcore-11.2.0 exists... | |
== 2024-04-30 15:28:14,368 modules.py:631 INFO Module Python/3.9.6-GCCcore-11.2.0 exists (found in list of available modules) | |
== 2024-04-30 15:28:14,368 modules.py:654 INFO Result for existence check of Python/3.9.6-GCCcore-11.2.0 module: True | |
== 2024-04-30 15:28:14,368 modules.py:626 INFO Checking whether SciPy-bundle/2021.10-foss-2021b exists... | |
== 2024-04-30 15:28:14,368 modules.py:631 INFO Module SciPy-bundle/2021.10-foss-2021b exists (found in list of available modules) | |
== 2024-04-30 15:28:14,368 modules.py:654 INFO Result for existence check of SciPy-bundle/2021.10-foss-2021b module: True | |
== 2024-04-30 15:28:14,368 modules.py:626 INFO Checking whether Seaborn/0.11.2-foss-2021b exists... | |
== 2024-04-30 15:28:14,368 modules.py:631 INFO Module Seaborn/0.11.2-foss-2021b exists (found in list of available modules) | |
== 2024-04-30 15:28:14,368 modules.py:654 INFO Result for existence check of Seaborn/0.11.2-foss-2021b module: True | |
== 2024-04-30 15:28:14,368 modules.py:626 INFO Checking whether statsmodels/0.13.1-foss-2021b exists... | |
== 2024-04-30 15:28:14,368 modules.py:631 INFO Module statsmodels/0.13.1-foss-2021b exists (found in list of available modules) | |
== 2024-04-30 15:28:14,369 modules.py:654 INFO Result for existence check of statsmodels/0.13.1-foss-2021b module: True | |
== 2024-04-30 15:28:14,369 modules.py:626 INFO Checking whether scikit-learn/1.0.1-foss-2021b exists... | |
== 2024-04-30 15:28:14,369 modules.py:631 INFO Module scikit-learn/1.0.1-foss-2021b exists (found in list of available modules) | |
== 2024-04-30 15:28:14,369 modules.py:654 INFO Result for existence check of scikit-learn/1.0.1-foss-2021b module: True | |
== 2024-04-30 15:28:14,369 modules.py:626 INFO Checking whether tqdm/4.62.3-GCCcore-11.2.0 exists... | |
== 2024-04-30 15:28:14,369 modules.py:631 INFO Module tqdm/4.62.3-GCCcore-11.2.0 exists (found in list of available modules) | |
== 2024-04-30 15:28:14,369 modules.py:654 INFO Result for existence check of tqdm/4.62.3-GCCcore-11.2.0 module: True | |
== 2024-04-30 15:28:14,369 modules.py:626 INFO Checking whether PyMC/2.3.8-foss-2021b exists... | |
== 2024-04-30 15:28:14,369 modules.py:631 INFO Module PyMC/2.3.8-foss-2021b exists (found in list of available modules) | |
== 2024-04-30 15:28:14,369 modules.py:654 INFO Result for existence check of PyMC/2.3.8-foss-2021b module: True | |
== 2024-04-30 15:28:14,369 modules.py:626 INFO Checking whether ArviZ/0.11.4-foss-2021b exists... | |
== 2024-04-30 15:28:14,369 modules.py:631 INFO Module ArviZ/0.11.4-foss-2021b exists (found in list of available modules) | |
== 2024-04-30 15:28:14,369 modules.py:654 INFO Result for existence check of ArviZ/0.11.4-foss-2021b module: True | |
== 2024-04-30 15:28:14,369 modules.py:626 INFO Checking whether PyTorch/1.12.1-foss-2021b exists... | |
== 2024-04-30 15:28:14,369 modules.py:633 INFO Module PyTorch/1.12.1-foss-2021b not found in list of available modules, checking via 'module show'... | |
== 2024-04-30 15:28:14,369 modules.py:570 DEBUG Checking whether PyTorch/1.12.1-foss-2021b exists based on output of 'module show' | |
== 2024-04-30 15:28:14,370 modules.py:812 DEBUG Current MODULEPATH: /project/def-maintainers/boegelbot/rocky9/zen3/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core | |
== 2024-04-30 15:28:14,370 modules.py:821 DEBUG Changing LD_LIBRARY_PATH from '/opt/software/slurm/lib64' to '/opt/software/slurm/lib64:/opt/software/slurm/lib64' in environment for module command | |
== 2024-04-30 15:28:14,370 modules.py:826 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python show PyTorch/1.12.1-foss-2021b' from /home/boegelbot/boegelbot | |
== 2024-04-30 15:28:16,287 modules.py:833 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python show PyTorch/1.12.1-foss-2021b': stdout: import os | |
os.environ["MODULEPATH"] = "/project/def-maintainers/boegelbot/rocky9/zen3/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core"; | |
os.environ["_ModuleTable001_"] = "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"; | |
os.environ["_ModuleTable002_"] = "cmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsCn0K"; | |
os.environ["_ModuleTable_Sz_"] = "2"; | |
_mlstatus = True | |
; stderr: | |
== 2024-04-30 15:28:16,287 modules.py:721 DEBUG Cached result for 'module show PyTorch/1.12.1-foss-2021b' with key '('MODULEPATH=/project/def-maintainers/boegelbot/rocky9/zen3/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core', 'lmod', 'PyTorch/1.12.1-foss-2021b')': | |
== 2024-04-30 15:28:16,287 modules.py:580 DEBUG Checking line '' to determine whether PyTorch/1.12.1-foss-2021b exists... | |
== 2024-04-30 15:28:16,287 modules.py:584 DEBUG Treating line '' as whitespace, so skipping it | |
== 2024-04-30 15:28:16,288 modules.py:647 INFO Module PyTorch/1.12.1-foss-2021b not found via module avail/show, checking whether it is a wrapper | |
== 2024-04-30 15:28:16,288 modules.py:654 INFO Result for existence check of PyTorch/1.12.1-foss-2021b module: False | |
== 2024-04-30 15:28:16,294 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/easybuild-framework/easybuild/base/exceptions.py:126 in __init__): Missing modules for dependencies (use --robot?): PyTorch/1.12.1-foss-2021b (at easybuild/easybuild-framework/easybuild/tools/toolchain/toolchain.py:563 in _check_dependencies) | |
== 2024-04-30 15:28:16,294 build_log.py:267 INFO ... (took 1 secs) | |
== 2024-04-30 15:28:16,294 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/def-maintainers/boegelbot/rocky9/zen3/software | |
== 2024-04-30 15:28:16,294 filetools.py:2013 INFO Removing lock /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock... | |
== 2024-04-30 15:28:16,296 filetools.py:383 INFO Path /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock successfully removed. | |
== 2024-04-30 15:28:16,296 filetools.py:2017 INFO Lock removed: /project/def-maintainers/boegelbot/rocky9/zen3/software/.locks/_project_def-maintainers_boegelbot_rocky9_zen3_software_HDDM_0.9.9-foss-2021b.lock | |
== 2024-04-30 15:28:16,296 easyblock.py:4291 WARNING build failed (first 300 chars): Missing modules for dependencies (use --robot?): PyTorch/1.12.1-foss-2021b | |
== 2024-04-30 15:28:16,296 easyblock.py:328 INFO Closing log for application name HDDM version 0.9.9 |
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