Created
July 19, 2024 12:51
-
-
Save boegelbot/2d811a1d4c1d78208754c647eea48275 to your computer and use it in GitHub Desktop.
(partial) EasyBuild log for failed build of /tmp/eb-sqs1coin/files_pr20989/s/spglib/spglib-2.5.0-GCCcore-12.3.0.eb (PR(s) #20989)
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
== 2024-07-19 12:47:01,107 easyblock.py:313 INFO This is EasyBuild 4.9.3.dev0-rc4951c78d62fa5cf8e9f6fe0ead212d2a4d7cb9c (framework: 4.9.3.dev0-r114862506cc904903c368eb224fa6766c80bfca8, easyblocks: 4.9.3.dev0-rc4951c78d62fa5cf8e9f6fe0ead212d2a4d7cb9c) on host cns1. | |
== 2024-07-19 12:47:01,107 easyblock.py:319 INFO This is easyblock CMakeMake from module easybuild.easyblocks.generic.cmakemake (/home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyblocks/generic/cmakemake.py) | |
== 2024-07-19 12:47:01,107 easyblock.py:1063 INFO Build dir set to /tmp/boegelbot/spglib/2.5.0/GCCcore-12.3.0 | |
== 2024-07-19 12:47:01,107 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/boegelbot/Rocky8/haswell/software | |
== 2024-07-19 12:47:01,108 easyconfig.py:2655 DEBUG Determining software installation subdir for spglib EasyConfig @ /tmp/eb-sqs1coin/files_pr20989/s/spglib/spglib-2.5.0-GCCcore-12.3.0.eb | |
== 2024-07-19 12:47:01,108 easyconfig.py:2658 DEBUG Using fixed naming software installation subdir: spglib/2.5.0-GCCcore-12.3.0 | |
== 2024-07-19 12:47:01,108 easyblock.py:1120 INFO Software install dir set to /project/boegelbot/Rocky8/haswell/software/spglib/2.5.0-GCCcore-12.3.0 | |
== 2024-07-19 12:47:01,108 config.py:700 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /project/boegelbot/Rocky8/haswell/modules | |
== 2024-07-19 12:47:01,108 easyblock.py:1125 INFO Module install dir set to /project/boegelbot/Rocky8/haswell/modules/all | |
== 2024-07-19 12:47:01,108 easyblock.py:288 INFO Init completed for application name spglib version 2.5.0 | |
== 2024-07-19 12:47:01,108 easyblock.py:4235 INFO Obtained application instance of for spglib (easyblock: CMakeMake) | |
== 2024-07-19 12:47:01,108 easyblock.py:4248 DEBUG Skip set to False | |
== 2024-07-19 12:47:01,109 easyconfig.py:1702 INFO Generating template values... | |
== 2024-07-19 12:47:01,109 templates.py:201 DEBUG config: spglib EasyConfig @ /tmp/eb-sqs1coin/files_pr20989/s/spglib/spglib-2.5.0-GCCcore-12.3.0.eb | |
== 2024-07-19 12:47:01,109 templates.py:231 DEBUG version found in easyconfig is 2.5.0 | |
== 2024-07-19 12:47:01,109 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-07-19 12:47:01,109 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-07-19 12:47:01,109 templates.py:333 DEBUG name: name, config: spglib | |
== 2024-07-19 12:47:01,110 templates.py:333 DEBUG name: parallel, config: None | |
== 2024-07-19 12:47:01,110 templates.py:333 DEBUG name: version, config: 2.5.0 | |
== 2024-07-19 12:47:01,110 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-07-19 12:47:01,110 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-07-19 12:47:01,110 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='spglib', cuda_cc_cmake='70', cuda_cc_semicolon_sep='7.0', cuda_cc_space_sep='7.0', cuda_compute_capabilities='7.0', cuda_sm_comma_sep='sm_70', cuda_sm_space_sep='sm_70', github_account='spglib', module_name='spglib/2.5.0-GCCcore-12.3.0', name='spglib', nameletter='s', nameletterlower='s', namelower='spglib', sysroot='', toolchain_name='GCCcore', toolchain_version='12.3.0', version='2.5.0', version_major='2', version_major_minor='2.5', version_minor='5', versionprefix='', versionsuffix='' | |
== 2024-07-19 12:47:01,110 one.py:150 DEBUG Not copying '__builtins__' variable from parsed easyconfig | |
== 2024-07-19 12:47:01,111 one.py:529 DEBUG Extracted comments: | |
{'above': {}, | |
'header': ['# with thanks to akesandgren for the easyconfig for 2022a', | |
'# updated for 2022b by BEAR Software team at University of Birmingham', | |
'# update to v2.5.0 for GCC/12.3.0 by Pavel Tománek (Inuits)', | |
''], | |
'inline': {}, | |
'iterabove': {}, | |
'iterinline': {}, | |
'tail': []} | |
== 2024-07-19 12:47:01,111 one.py:180 INFO Skipping reformatting value for parameter 'toolchain' | |
== 2024-07-19 12:47:01,112 easyconfig.py:1265 DEBUG Dumped easyconfig: # with thanks to akesandgren for the easyconfig for 2022a | |
# updated for 2022b by BEAR Software team at University of Birmingham | |
# update to v2.5.0 for GCC/12.3.0 by Pavel Tománek (Inuits) | |
easyblock = 'CMakeMake' | |
name = 'spglib' | |
version = '2.5.0' | |
homepage = 'https://spglib.github.io/spglib/' | |
description = "Spglib is a C library for finding and handling crystal symmetries." | |
toolchain = {'name': 'GCCcore', 'version': '12.3.0'} | |
source_urls = ['https://github.com/%(name)s/%(name)s/archive'] | |
sources = ['v%(version)s.tar.gz'] | |
checksums = ['b6026f5e85106c0c9ee57e54b9399890d0f29982e20e96ede0428b3efbe6b914'] | |
builddependencies = [ | |
('binutils', '2.40'), | |
('CMake', '3.26.3'), | |
] | |
postinstallcmds = ['cd %(installdir)s/include && mkdir %(name)s && ln -s ../%(name)s.h %(name)s/'] | |
sanity_check_paths = { | |
'files': ['include/%(name)s.h', 'lib/libsymspg.so'], | |
'dirs': [], | |
} | |
moduleclass = 'chem' | |
== 2024-07-19 12:47:01,112 filetools.py:1922 INFO Creating directory /tmp/eb-sqs1coin/reprod_20240719124701_185967 (parents: True, set_gid: False, sticky: False) | |
== 2024-07-19 12:47:01,112 easyblock.py:4489 INFO Dumped easyconfig instance to /tmp/eb-sqs1coin/reprod_20240719124701_185967/spglib-2.5.0-GCCcore-12.3.0.eb | |
== 2024-07-19 12:47:01,114 filetools.py:1922 INFO Creating directory /tmp/eb-sqs1coin/reprod_20240719124701_185967/easyblocks (parents: True, set_gid: False, sticky: False) | |
== 2024-07-19 12:47:01,114 filetools.py:2435 INFO /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.py copied to /tmp/eb-sqs1coin/reprod_20240719124701_185967/easyblocks/configuremake.py | |
== 2024-07-19 12:47:01,114 easyblock.py:4469 INFO Dumped easyblock configuremake.py required for reproduction to /tmp/eb-sqs1coin/reprod_20240719124701_185967/easyblocks | |
== 2024-07-19 12:47:01,115 filetools.py:1941 DEBUG Not creating existing path /tmp/eb-sqs1coin/reprod_20240719124701_185967/easyblocks | |
== 2024-07-19 12:47:01,115 filetools.py:2435 INFO /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyblocks/generic/cmakemake.py copied to /tmp/eb-sqs1coin/reprod_20240719124701_185967/easyblocks/cmakemake.py | |
== 2024-07-19 12:47:01,115 easyblock.py:4469 INFO Dumped easyblock cmakemake.py required for reproduction to /tmp/eb-sqs1coin/reprod_20240719124701_185967/easyblocks | |
== 2024-07-19 12:47:01,115 filetools.py:1922 INFO Creating directory /tmp/eb-sqs1coin/reprod_20240719124701_185967/hooks (parents: True, set_gid: False, sticky: False) | |
== 2024-07-19 12:47:01,116 filetools.py:2435 INFO /home/boegelbot/boegelbot/eb_hooks.py copied to /tmp/eb-sqs1coin/reprod_20240719124701_185967/hooks/eb_hooks.py | |
== 2024-07-19 12:47:01,116 easyblock.py:4501 INFO Dumped hooks file /home/boegelbot/boegelbot/eb_hooks.py which is (potentially) required for reproduction to /tmp/eb-sqs1coin/reprod_20240719124701_185967/hooks/eb_hooks.py | |
== 2024-07-19 12:47:01,117 easyblock.py:2243 INFO Number of iterations to perform for central part of installation procedure: 1 | |
== 2024-07-19 12:47:01,117 build_log.py:267 INFO building and installing spglib/2.5.0-GCCcore-12.3.0... | |
== 2024-07-19 12:47:01,117 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/boegelbot/Rocky8/haswell/software | |
== 2024-07-19 12:47:01,118 filetools.py:2015 INFO Lock /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_spglib_2.5.0-GCCcore-12.3.0.lock does not exist | |
== 2024-07-19 12:47:01,118 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/boegelbot/Rocky8/haswell/software | |
== 2024-07-19 12:47:01,118 filetools.py:1956 INFO Creating lock at /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_spglib_2.5.0-GCCcore-12.3.0.lock... | |
== 2024-07-19 12:47:01,118 filetools.py:1922 INFO Creating directory /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_spglib_2.5.0-GCCcore-12.3.0.lock (parents: True, set_gid: False, sticky: False) | |
== 2024-07-19 12:47:01,119 filetools.py:1965 INFO Lock created: /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_spglib_2.5.0-GCCcore-12.3.0.lock | |
== 2024-07-19 12:47:01,119 easyblock.py:3949 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
== 2024-07-19 12:47:01,119 build_log.py:267 INFO fetching files... | |
== 2024-07-19 12:47:01,119 easyblock.py:3957 INFO Starting fetch step | |
== 2024-07-19 12:47:01,119 easyconfig.py:1702 INFO Generating template values... | |
== 2024-07-19 12:47:01,120 templates.py:201 DEBUG config: spglib EasyConfig @ /tmp/eb-sqs1coin/files_pr20989/s/spglib/spglib-2.5.0-GCCcore-12.3.0.eb | |
== 2024-07-19 12:47:01,120 templates.py:231 DEBUG version found in easyconfig is 2.5.0 | |
== 2024-07-19 12:47:01,120 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-07-19 12:47:01,120 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-07-19 12:47:01,120 templates.py:333 DEBUG name: name, config: spglib | |
== 2024-07-19 12:47:01,120 templates.py:333 DEBUG name: parallel, config: None | |
== 2024-07-19 12:47:01,120 templates.py:333 DEBUG name: version, config: 2.5.0 | |
== 2024-07-19 12:47:01,120 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-07-19 12:47:01,120 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-07-19 12:47:01,121 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='spglib', builddir='/tmp/boegelbot/spglib/2.5.0/GCCcore-12.3.0', cuda_cc_cmake='70', cuda_cc_semicolon_sep='7.0', cuda_cc_space_sep='7.0', cuda_compute_capabilities='7.0', cuda_sm_comma_sep='sm_70', cuda_sm_space_sep='sm_70', github_account='spglib', installdir='/project/boegelbot/Rocky8/haswell/software/spglib/2.5.0-GCCcore-12.3.0', module_name='spglib/2.5.0-GCCcore-12.3.0', name='spglib', nameletter='s', nameletterlower='s', namelower='spglib', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='12.3.0', version='2.5.0', version_major='2', version_major_minor='2.5', version_minor='5', versionprefix='', versionsuffix='' | |
== 2024-07-19 12:47:01,121 easyblock.py:3965 INFO Running method fetch_step part of step fetch | |
== 2024-07-19 12:47:01,121 easyblock.py:2365 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
== 2024-07-19 12:47:01,121 easyblock.py:817 INFO Considering directory in which easyconfig file is located when searching for v2.5.0.tar.gz: /tmp/eb-sqs1coin/files_pr20989/s/spglib | |
== 2024-07-19 12:47:01,121 tools.py:282 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/boegelbot/easybuild/easybuild-framework/eb | |
== 2024-07-19 12:47:01,121 tools.py:298 INFO Not considering /home/boegelbot/easybuild (no easybuild/easyconfigs subdir found) | |
== 2024-07-19 12:47:01,122 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,122 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-sqs1coin/files_pr20989/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,122 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-sqs1coin/fake_vsc_8qc3xhn_/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,122 tools.py:311 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs | |
== 2024-07-19 12:47:01,122 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,122 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-framework/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,123 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,123 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,123 tools.py:315 DEBUG Added /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
== 2024-07-19 12:47:01,123 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python36.zip/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,123 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.6/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,123 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.6/lib-dynload/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,123 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.6/site-packages/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,123 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.6/site-packages/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,123 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.6/site-packages/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,124 tools.py:311 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
== 2024-07-19 12:47:01,126 easyblock.py:858 INFO Found file v2.5.0.tar.gz at /project/boegelbot/sources/s/spglib/v2.5.0.tar.gz | |
== 2024-07-19 12:47:01,126 easyblock.py:452 DEBUG File /project/boegelbot/sources/s/spglib/v2.5.0.tar.gz found for source v2.5.0.tar.gz | |
== 2024-07-19 12:47:01,126 easyblock.py:496 INFO Added sources: [{'name': 'v2.5.0.tar.gz', 'path': '/project/boegelbot/sources/s/spglib/v2.5.0.tar.gz', 'cmd': None, 'checksum': 'b6026f5e85106c0c9ee57e54b9399890d0f29982e20e96ede0428b3efbe6b914', 'finalpath': '/tmp/boegelbot/spglib/2.5.0/GCCcore-12.3.0'}] | |
== 2024-07-19 12:47:01,126 easyblock.py:2408 INFO no patches provided | |
== 2024-07-19 12:47:01,127 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-07-19 12:47:01,142 easyblock.py:2418 INFO md5 checksum for /project/boegelbot/sources/s/spglib/v2.5.0.tar.gz: b018e2b644d0a9dd17455a330289950c | |
== 2024-07-19 12:47:01,142 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-07-19 12:47:01,151 easyblock.py:2418 INFO sha256 checksum for /project/boegelbot/sources/s/spglib/v2.5.0.tar.gz: 80c060b1a606a76b15f2cc708e9fdd4a83479924ebff9ac16ed26a87a0eac1a9 | |
== 2024-07-19 12:47:01,151 easyconfig.py:2642 DEBUG Determining full module name for spglib EasyConfig @ /tmp/eb-sqs1coin/files_pr20989/s/spglib/spglib-2.5.0-GCCcore-12.3.0.eb (force_visible: False) | |
== 2024-07-19 12:47:01,151 easyconfig.py:2619 DEBUG No alternative software name specified to determine module name with | |
== 2024-07-19 12:47:01,151 utilities.py:115 DEBUG Module name spglib/2.5.0-GCCcore-12.3.0 validated | |
== 2024-07-19 12:47:01,152 easyconfig.py:2650 DEBUG Obtained valid full module name spglib/2.5.0-GCCcore-12.3.0 | |
== 2024-07-19 12:47:01,152 config.py:700 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /project/boegelbot/Rocky8/haswell/modules | |
== 2024-07-19 12:47:01,152 easyblock.py:2453 INFO Checking dirs that need to be created: ['/project/boegelbot/Rocky8/haswell/software/spglib/2.5.0-GCCcore-12.3.0', '/project/boegelbot/Rocky8/haswell/modules/all/spglib', '/project/boegelbot/Rocky8/haswell/modules/chem/spglib'] | |
== 2024-07-19 12:47:01,152 filetools.py:1941 DEBUG Not creating existing path /project/boegelbot/Rocky8/haswell/software/spglib/2.5.0-GCCcore-12.3.0 | |
== 2024-07-19 12:47:01,152 filetools.py:1941 DEBUG Not creating existing path /project/boegelbot/Rocky8/haswell/modules/all/spglib | |
== 2024-07-19 12:47:01,153 filetools.py:1941 DEBUG Not creating existing path /project/boegelbot/Rocky8/haswell/modules/chem/spglib | |
== 2024-07-19 12:47:01,154 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-07-19 12:47:01,155 configuremake.py:96 INFO config.guess version: 2018-08-29 (last updated: 2024-06-13T07:15:31.420600, SHA256 checksum: c02eb9cc55c86cfd1e9a794e548d25db5c9539e7b2154beb649bc6e2cbffc74c) | |
== 2024-07-19 12:47:01,155 configuremake.py:151 INFO Found config.guess at /project/boegelbot/sources/generic/eb_v4.9.3.dev0/ConfigureMake/config.guess | |
== 2024-07-19 12:47:01,155 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-07-19 12:47:01,155 easyblock.py:3949 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
== 2024-07-19 12:47:01,156 build_log.py:267 INFO creating build dir, resetting environment... | |
== 2024-07-19 12:47:01,156 easyblock.py:3957 INFO Starting ready step | |
== 2024-07-19 12:47:01,156 easyconfig.py:1702 INFO Generating template values... | |
== 2024-07-19 12:47:01,156 templates.py:201 DEBUG config: spglib EasyConfig @ /tmp/eb-sqs1coin/files_pr20989/s/spglib/spglib-2.5.0-GCCcore-12.3.0.eb | |
== 2024-07-19 12:47:01,156 templates.py:231 DEBUG version found in easyconfig is 2.5.0 | |
== 2024-07-19 12:47:01,156 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-07-19 12:47:01,156 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-07-19 12:47:01,156 templates.py:333 DEBUG name: name, config: spglib | |
== 2024-07-19 12:47:01,157 templates.py:333 DEBUG name: parallel, config: None | |
== 2024-07-19 12:47:01,157 templates.py:333 DEBUG name: version, config: 2.5.0 | |
== 2024-07-19 12:47:01,157 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-07-19 12:47:01,157 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-07-19 12:47:01,157 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='spglib', builddir='/tmp/boegelbot/spglib/2.5.0/GCCcore-12.3.0', cuda_cc_cmake='70', cuda_cc_semicolon_sep='7.0', cuda_cc_space_sep='7.0', cuda_compute_capabilities='7.0', cuda_sm_comma_sep='sm_70', cuda_sm_space_sep='sm_70', github_account='spglib', installdir='/project/boegelbot/Rocky8/haswell/software/spglib/2.5.0-GCCcore-12.3.0', module_name='spglib/2.5.0-GCCcore-12.3.0', name='spglib', nameletter='s', nameletterlower='s', namelower='spglib', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='12.3.0', version='2.5.0', version_major='2', version_major_minor='2.5', version_minor='5', versionprefix='', versionsuffix='' | |
== 2024-07-19 12:47:01,157 easyblock.py:3965 INFO Running method check_readiness_step part of step ready | |
== 2024-07-19 12:47:01,157 easyblock.py:2253 DEBUG Desired parallelism specified via 'parallel' build option: None | |
== 2024-07-19 12:47:01,157 easyblock.py:2262 INFO Setting parallelism: 4 | |
== 2024-07-19 12:47:01,158 modules.py:814 DEBUG Current MODULEPATH: /project/boegelbot/Rocky8/haswell/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core | |
== 2024-07-19 12:47:01,158 modules.py:824 DEBUG Changing LD_LIBRARY_PATH from '/opt/software/slurm/lib64' to '/opt/software/slurm/lib64:/opt/software/slurm/lib64' in environment for module command | |
== 2024-07-19 12:47:01,158 modules.py:828 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python --terse list' from /home/boegelbot/boegelbot | |
== 2024-07-19 12:47:01,196 modules.py:835 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python --terse list': stdout: import os | |
os.environ["MODULEPATH"] = "/project/boegelbot/Rocky8/haswell/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core"; | |
os.environ["_ModuleTable001_"] = "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"; | |
os.environ["_ModuleTable002_"] = "czovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4Oi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZTovdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIiwKfQo="; | |
os.environ["_ModuleTable_Sz_"] = "2"; | |
_mlstatus = True | |
; stderr: No modules loaded | |
== 2024-07-19 12:47:01,197 modules.py:1471 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python --terse list' ran fine | |
== 2024-07-19 12:47:01,241 easyblock.py:2287 INFO Removing existing module file /project/boegelbot/Rocky8/haswell/modules/all/spglib/2.5.0-GCCcore-12.3.0.lua | |
== 2024-07-19 12:47:01,242 easyblock.py:3965 INFO Running method make_builddir part of step ready | |
== 2024-07-19 12:47:01,242 easyblock.py:1073 DEBUG Creating the build directory /tmp/boegelbot/spglib/2.5.0/GCCcore-12.3.0 (cleanup: True) | |
== 2024-07-19 12:47:01,243 filetools.py:1922 INFO Creating directory /tmp/boegelbot/spglib/2.5.0/GCCcore-12.3.0 (parents: True, set_gid: False, sticky: False) | |
== 2024-07-19 12:47:01,243 easyblock.py:3965 INFO Running method reset_env part of step ready | |
== 2024-07-19 12:47:01,244 easyblock.py:3965 INFO Running method handle_iterate_opts part of step ready | |
== 2024-07-19 12:47:01,244 easyconfig.py:1702 INFO Generating template values... | |
== 2024-07-19 12:47:01,244 templates.py:201 DEBUG config: spglib EasyConfig @ /tmp/eb-sqs1coin/files_pr20989/s/spglib/spglib-2.5.0-GCCcore-12.3.0.eb | |
== 2024-07-19 12:47:01,244 templates.py:231 DEBUG version found in easyconfig is 2.5.0 | |
== 2024-07-19 12:47:01,245 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-07-19 12:47:01,245 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-07-19 12:47:01,245 templates.py:333 DEBUG name: name, config: spglib | |
== 2024-07-19 12:47:01,245 templates.py:333 DEBUG name: parallel, config: 4 | |
== 2024-07-19 12:47:01,245 templates.py:333 DEBUG name: version, config: 2.5.0 | |
== 2024-07-19 12:47:01,245 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-07-19 12:47:01,245 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-07-19 12:47:01,245 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='spglib', builddir='/tmp/boegelbot/spglib/2.5.0/GCCcore-12.3.0', cuda_cc_cmake='70', cuda_cc_semicolon_sep='7.0', cuda_cc_space_sep='7.0', cuda_compute_capabilities='7.0', cuda_sm_comma_sep='sm_70', cuda_sm_space_sep='sm_70', github_account='spglib', installdir='/project/boegelbot/Rocky8/haswell/software/spglib/2.5.0-GCCcore-12.3.0', module_name='spglib/2.5.0-GCCcore-12.3.0', name='spglib', nameletter='s', nameletterlower='s', namelower='spglib', parallel='4', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='12.3.0', version='2.5.0', version_major='2', version_major_minor='2.5', version_minor='5', versionprefix='', versionsuffix='' | |
== 2024-07-19 12:47:01,246 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-07-19 12:47:01,246 easyblock.py:3949 DEBUG Not skipping source step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
== 2024-07-19 12:47:01,246 build_log.py:267 INFO unpacking... | |
== 2024-07-19 12:47:01,246 easyblock.py:3957 INFO Starting source step | |
== 2024-07-19 12:47:01,246 easyconfig.py:1702 INFO Generating template values... | |
== 2024-07-19 12:47:01,246 templates.py:201 DEBUG config: spglib EasyConfig @ /tmp/eb-sqs1coin/files_pr20989/s/spglib/spglib-2.5.0-GCCcore-12.3.0.eb | |
== 2024-07-19 12:47:01,246 templates.py:231 DEBUG version found in easyconfig is 2.5.0 | |
== 2024-07-19 12:47:01,247 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s | |
== 2024-07-19 12:47:01,247 templates.py:333 DEBUG name: github_account, config: %(namelower)s | |
== 2024-07-19 12:47:01,247 templates.py:333 DEBUG name: name, config: spglib | |
== 2024-07-19 12:47:01,247 templates.py:333 DEBUG name: parallel, config: 4 | |
== 2024-07-19 12:47:01,247 templates.py:333 DEBUG name: version, config: 2.5.0 | |
== 2024-07-19 12:47:01,247 templates.py:333 DEBUG name: versionsuffix, config: | |
== 2024-07-19 12:47:01,247 templates.py:333 DEBUG name: versionprefix, config: | |
== 2024-07-19 12:47:01,248 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='spglib', builddir='/tmp/boegelbot/spglib/2.5.0/GCCcore-12.3.0', cuda_cc_cmake='70', cuda_cc_semicolon_sep='7.0', cuda_cc_space_sep='7.0', cuda_compute_capabilities='7.0', cuda_sm_comma_sep='sm_70', cuda_sm_space_sep='sm_70', github_account='spglib', installdir='/project/boegelbot/Rocky8/haswell/software/spglib/2.5.0-GCCcore-12.3.0', module_name='spglib/2.5.0-GCCcore-12.3.0', name='spglib', nameletter='s', nameletterlower='s', namelower='spglib', parallel='4', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='12.3.0', version='2.5.0', version_major='2', version_major_minor='2.5', version_minor='5', versionprefix='', versionsuffix='' | |
== 2024-07-19 12:47:01,248 easyblock.py:3965 INFO Running method checksum_step part of step source | |
== 2024-07-19 12:47:01,248 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum | |
== 2024-07-19 12:47:01,262 filetools.py:1317 DEBUG Computed sha256 checksum for /project/boegelbot/sources/s/spglib/v2.5.0.tar.gz: 80c060b1a606a76b15f2cc708e9fdd4a83479924ebff9ac16ed26a87a0eac1a9 (correct checksum: b6026f5e85106c0c9ee57e54b9399890d0f29982e20e96ede0428b3efbe6b914) | |
== 2024-07-19 12:47:01,442 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/easybuild-framework/easybuild/base/exceptions.py:126 in __init__): Checksum verification for /project/boegelbot/sources/s/spglib/v2.5.0.tar.gz using b6026f5e85106c0c9ee57e54b9399890d0f29982e20e96ede0428b3efbe6b914 failed. (at easybuild/easybuild-framework/easybuild/framework/easyblock.py:2475 in checksum_step) | |
== 2024-07-19 12:47:01,442 build_log.py:267 INFO ... (took < 1 sec) | |
== 2024-07-19 12:47:01,442 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/boegelbot/Rocky8/haswell/software | |
== 2024-07-19 12:47:01,442 filetools.py:2023 INFO Removing lock /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_spglib_2.5.0-GCCcore-12.3.0.lock... | |
== 2024-07-19 12:47:01,443 filetools.py:383 INFO Path /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_spglib_2.5.0-GCCcore-12.3.0.lock successfully removed. | |
== 2024-07-19 12:47:01,444 filetools.py:2027 INFO Lock removed: /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_spglib_2.5.0-GCCcore-12.3.0.lock | |
== 2024-07-19 12:47:01,444 easyblock.py:4292 WARNING build failed (first 300 chars): Checksum verification for /project/boegelbot/sources/s/spglib/v2.5.0.tar.gz using b6026f5e85106c0c9ee57e54b9399890d0f29982e20e96ede0428b3efbe6b914 failed. | |
== 2024-07-19 12:47:01,444 easyblock.py:328 INFO Closing log for application name spglib version 2.5.0 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment