boegelbot/WRF-4.5.1-foss-2023a-dmpar_partial.log

## WRF-4.5.1-foss-2023a-dmpar_partial.log
== 2024-06-13 13:05:36,641 easyblock.py:313 INFO This is EasyBuild 4.9.3.dev0-rd4098ba35371823fd3b92f5732e2227b66092fa8 (framework: 4.9.3.dev0-rd4098ba35371823fd3b92f5732e2227b66092fa8, easyblocks: 4.9.3.dev0-rd0211e805fb53102cbf915f6d12646d01e81ef07) on host cns2.
== 2024-06-13 13:05:36,641 easyblock.py:319 INFO This is easyblock EB_WRF from module easybuild.easyblocks.wrf (/home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyblocks/w/wrf.py)
== 2024-06-13 13:05:36,641 easyblock.py:1056 INFO Build dir set to /tmp/boegelbot/WRF/4.5.1/foss-2023a-dmpar
== 2024-06-13 13:05:36,641 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/boegelbot/Rocky8/haswell/software
== 2024-06-13 13:05:36,641 easyconfig.py:2655 DEBUG Determining software installation subdir for WRF EasyConfig @ /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1-foss-2023a-dmpar.eb
== 2024-06-13 13:05:36,641 easyconfig.py:2658 DEBUG Using fixed naming software installation subdir: WRF/4.5.1-foss-2023a-dmpar
== 2024-06-13 13:05:36,642 easyblock.py:1113 INFO Software install dir set to /project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar
== 2024-06-13 13:05:36,642 config.py:700 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /project/boegelbot/Rocky8/haswell/modules
== 2024-06-13 13:05:36,642 easyblock.py:1118 INFO Module install dir set to /project/boegelbot/Rocky8/haswell/modules/all
== 2024-06-13 13:05:36,642 easyblock.py:288 INFO Init completed for application name WRF version 4.5.1
== 2024-06-13 13:05:36,642 easyblock.py:4228 INFO Obtained application instance of for WRF (easyblock: None)
== 2024-06-13 13:05:36,642 easyblock.py:4241 DEBUG Skip set to False
== 2024-06-13 13:05:36,642 easyconfig.py:1702 INFO Generating template values...
== 2024-06-13 13:05:36,643 templates.py:201 DEBUG config: WRF EasyConfig @ /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1-foss-2023a-dmpar.eb
== 2024-06-13 13:05:36,643 templates.py:231 DEBUG version found in easyconfig is 4.5.1
== 2024-06-13 13:05:36,643 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s
== 2024-06-13 13:05:36,643 templates.py:333 DEBUG name: github_account, config: wrf-model
== 2024-06-13 13:05:36,643 templates.py:333 DEBUG name: name, config: WRF
== 2024-06-13 13:05:36,643 templates.py:333 DEBUG name: parallel, config: None
== 2024-06-13 13:05:36,643 templates.py:333 DEBUG name: version, config: 4.5.1
== 2024-06-13 13:05:36,643 templates.py:333 DEBUG name: versionsuffix, config: -dmpar
== 2024-06-13 13:05:36,643 templates.py:333 DEBUG name: versionprefix, config:
== 2024-06-13 13:05:36,644 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-06-13 13:05:36,644 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-06-13 13:05:36,644 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='wrf', cuda_cc_cmake='70', cuda_cc_semicolon_sep='7.0', cuda_cc_space_sep='7.0', cuda_compute_capabilities='7.0', cuda_sm_comma_sep='sm_70', cuda_sm_space_sep='sm_70', github_account='wrf-model', module_name='WRF/4.5.1-foss-2023a-dmpar', mpi_cmd_prefix='mpirun -n 1', name='WRF', nameletter='W', nameletterlower='w', namelower='wrf', perlmajver='5', perlminver='36', perlshortver='5.36', perlver='5.36.1', sysroot='', toolchain_name='foss', toolchain_version='2023a', version='4.5.1', version_major='4', version_major_minor='4.5', version_minor='5', versionprefix='', versionsuffix='-dmpar'
== 2024-06-13 13:05:36,644 one.py:150 DEBUG Not copying '__builtins__' variable from parsed easyconfig
== 2024-06-13 13:05:36,645 one.py:529 DEBUG Extracted comments:
{'above': {'builddependencies': ['# csh is used by WRF install scripts'],
           'maxparallel': ['# limit parallel build to 20']},
 'header': [],
 'inline': {'toolchainopts': "  # don't use agressive optimization, stick to -O2"},
 'iterabove': {},
 'iterinline': {},
 'tail': []}
== 2024-06-13 13:05:36,645 one.py:180 INFO Skipping reformatting value for parameter 'toolchain'
== 2024-06-13 13:05:36,646 one.py:180 INFO Skipping reformatting value for parameter 'toolchainopts'
== 2024-06-13 13:05:36,647 easyconfig.py:1265 DEBUG Dumped easyconfig: name = 'WRF'
version = '4.5.1'
versionsuffix = '-dmpar'

homepage = 'https://www.wrf-model.org'
description = """The Weather Research and Forecasting (WRF) Model is a next-generation mesoscale
 numerical weather prediction system designed to serve both operational forecasting and atmospheric
 research needs."""

toolchain = {'name': 'foss', 'version': '2023a'}
toolchainopts = {'opt': False}  # don't use agressive optimization, stick to -O2

source_urls = [GITHUB_RELEASE]
sources = ['v%(version)s.tar.gz']
patches = ['%(name)s-%(version_major_minor)s.1_netCDF-Fortran_separate_path.patch']
checksums = [
    {'v4.5.1.tar.gz': '9d557c34c105db4d41e727843ecb19199233c7cf82c5369b34a2ce8efe65e2d1'},
    {'%(name)s-%(version_major_minor)s.1_netCDF-Fortran_separate_path.patch': '951bff9a3fc651482b287cc03a9f3197979b7800d515fe61cc9c932d9e0dc62e'},
]

# csh is used by WRF install scripts
builddependencies = [
    ('Autotools', '20220317', '', ('GCCcore', '12.3.0')),
    ('tcsh', '6.24.10', '', ('GCCcore', '12.3.0')),
    ('time', '1.9', '', ('GCCcore', '12.3.0')),
    ('Perl', '5.36.1', '', ('GCCcore', '12.3.0')),
]
dependencies = [
    ('JasPer', '4.0.0', '', ('GCCcore', '12.3.0')),
    ('netCDF', '4.9.2', '', ('gompi', '2023a')),
    ('netCDF-Fortran', '4.6.1', '', ('gompi', '2023a')),
]

# limit parallel build to 20
maxparallel = 20

github_account = '%(namelower)s-model'
buildtype = 'dmpar'

moduleclass = 'geo'

== 2024-06-13 13:05:36,647 filetools.py:1912 INFO Creating directory /tmp/eb-91hs2cy9/reprod_20240613130536_402092 (parents: True, set_gid: False, sticky: False)
== 2024-06-13 13:05:36,648 easyblock.py:4482 INFO Dumped easyconfig instance to /tmp/eb-91hs2cy9/reprod_20240613130536_402092/WRF-4.5.1-foss-2023a-dmpar.eb
== 2024-06-13 13:05:36,648 filetools.py:1912 INFO Creating directory /tmp/eb-91hs2cy9/reprod_20240613130536_402092/easyblocks (parents: True, set_gid: False, sticky: False)
== 2024-06-13 13:05:36,649 filetools.py:2425 INFO /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyblocks/w/wrf.py copied to /tmp/eb-91hs2cy9/reprod_20240613130536_402092/easyblocks/wrf.py
== 2024-06-13 13:05:36,649 easyblock.py:4462 INFO Dumped easyblock wrf.py required for reproduction to /tmp/eb-91hs2cy9/reprod_20240613130536_402092/easyblocks
== 2024-06-13 13:05:36,650 filetools.py:1912 INFO Creating directory /tmp/eb-91hs2cy9/reprod_20240613130536_402092/hooks (parents: True, set_gid: False, sticky: False)
== 2024-06-13 13:05:36,651 filetools.py:2425 INFO /home/boegelbot/boegelbot/eb_hooks.py copied to /tmp/eb-91hs2cy9/reprod_20240613130536_402092/hooks/eb_hooks.py
== 2024-06-13 13:05:36,651 easyblock.py:4494 INFO Dumped hooks file /home/boegelbot/boegelbot/eb_hooks.py which is (potentially) required for reproduction to /tmp/eb-91hs2cy9/reprod_20240613130536_402092/hooks/eb_hooks.py
== 2024-06-13 13:05:36,652 easyblock.py:2236 INFO Number of iterations to perform for central part of installation procedure: 1
== 2024-06-13 13:05:36,652 build_log.py:267 INFO building and installing WRF/4.5.1-foss-2023a-dmpar...
== 2024-06-13 13:05:36,652 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/boegelbot/Rocky8/haswell/software
== 2024-06-13 13:05:36,653 filetools.py:2005 INFO Lock /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_WRF_4.5.1-foss-2023a-dmpar.lock does not exist
== 2024-06-13 13:05:36,653 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/boegelbot/Rocky8/haswell/software
== 2024-06-13 13:05:36,653 filetools.py:1946 INFO Creating lock at /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_WRF_4.5.1-foss-2023a-dmpar.lock...
== 2024-06-13 13:05:36,653 filetools.py:1912 INFO Creating directory /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_WRF_4.5.1-foss-2023a-dmpar.lock (parents: True, set_gid: False, sticky: False)
== 2024-06-13 13:05:36,654 filetools.py:1955 INFO Lock created: /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_WRF_4.5.1-foss-2023a-dmpar.lock
== 2024-06-13 13:05:36,654 easyblock.py:297 INFO Changing build dir to /project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar
== 2024-06-13 13:05:36,654 easyblock.py:3942 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False)
== 2024-06-13 13:05:36,654 build_log.py:267 INFO fetching files...
== 2024-06-13 13:05:36,654 easyblock.py:3950 INFO Starting fetch step
== 2024-06-13 13:05:36,655 easyconfig.py:1702 INFO Generating template values...
== 2024-06-13 13:05:36,655 templates.py:201 DEBUG config: WRF EasyConfig @ /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1-foss-2023a-dmpar.eb
== 2024-06-13 13:05:36,655 templates.py:231 DEBUG version found in easyconfig is 4.5.1
== 2024-06-13 13:05:36,655 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s
== 2024-06-13 13:05:36,655 templates.py:333 DEBUG name: github_account, config: wrf-model
== 2024-06-13 13:05:36,655 templates.py:333 DEBUG name: name, config: WRF
== 2024-06-13 13:05:36,655 templates.py:333 DEBUG name: parallel, config: None
== 2024-06-13 13:05:36,655 templates.py:333 DEBUG name: version, config: 4.5.1
== 2024-06-13 13:05:36,655 templates.py:333 DEBUG name: versionsuffix, config: -dmpar
== 2024-06-13 13:05:36,655 templates.py:333 DEBUG name: versionprefix, config:
== 2024-06-13 13:05:36,656 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-06-13 13:05:36,656 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-06-13 13:05:36,656 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='wrf', builddir='/project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar', cuda_cc_cmake='70', cuda_cc_semicolon_sep='7.0', cuda_cc_space_sep='7.0', cuda_compute_capabilities='7.0', cuda_sm_comma_sep='sm_70', cuda_sm_space_sep='sm_70', github_account='wrf-model', installdir='/project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar', module_name='WRF/4.5.1-foss-2023a-dmpar', mpi_cmd_prefix='mpirun -n 1', name='WRF', nameletter='W', nameletterlower='w', namelower='wrf', perlmajver='5', perlminver='36', perlshortver='5.36', perlver='5.36.1', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2023a', version='4.5.1', version_major='4', version_major_minor='4.5', version_minor='5', versionprefix='', versionsuffix='-dmpar'
== 2024-06-13 13:05:36,656 easyblock.py:3958 INFO Running method fetch_step part of step fetch
== 2024-06-13 13:05:36,656 easyblock.py:2358 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
== 2024-06-13 13:05:36,657 easyblock.py:810 INFO Considering directory in which easyconfig file is located when searching for v4.5.1.tar.gz: /tmp/eb-91hs2cy9/files_pr18741/w/WRF
== 2024-06-13 13:05:36,657 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/boegelbot/easybuild/easybuild-framework/eb
== 2024-06-13 13:05:36,657 tools.py:290 INFO Not considering /home/boegelbot/easybuild (no easybuild/easyconfigs subdir found)
== 2024-06-13 13:05:36,657 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs
== 2024-06-13 13:05:36,657 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-91hs2cy9/files_pr18741/easybuild/easyconfigs
== 2024-06-13 13:05:36,657 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-91hs2cy9/fake_vsc_g0a50r08/easybuild/easyconfigs
== 2024-06-13 13:05:36,658 tools.py:303 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs
== 2024-06-13 13:05:36,658 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.6/site-packages/git/ext/gitdb/easybuild/easyconfigs
== 2024-06-13 13:05:36,658 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-framework/easybuild/easyconfigs
== 2024-06-13 13:05:36,659 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyconfigs
== 2024-06-13 13:05:36,659 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs
== 2024-06-13 13:05:36,659 tools.py:307 DEBUG Added /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2024-06-13 13:05:36,659 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python36.zip/easybuild/easyconfigs
== 2024-06-13 13:05:36,659 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.6/easybuild/easyconfigs
== 2024-06-13 13:05:36,659 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.6/lib-dynload/easybuild/easyconfigs
== 2024-06-13 13:05:36,659 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.6/site-packages/easybuild/easyconfigs
== 2024-06-13 13:05:36,659 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.6/site-packages/easybuild/easyconfigs
== 2024-06-13 13:05:36,659 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.6/site-packages/easybuild/easyconfigs
== 2024-06-13 13:05:36,659 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs
== 2024-06-13 13:05:36,789 easyblock.py:851 INFO Found file v4.5.1.tar.gz at /project/boegelbot/sources/w/WRF/v4.5.1.tar.gz
== 2024-06-13 13:05:36,789 easyblock.py:452 DEBUG File /project/boegelbot/sources/w/WRF/v4.5.1.tar.gz found for source v4.5.1.tar.gz
== 2024-06-13 13:05:36,790 easyblock.py:496 INFO Added sources: [{'name': 'v4.5.1.tar.gz', 'path': '/project/boegelbot/sources/w/WRF/v4.5.1.tar.gz', 'cmd': None, 'checksum': {'v4.5.1.tar.gz': '9d557c34c105db4d41e727843ecb19199233c7cf82c5369b34a2ce8efe65e2d1'}, 'finalpath': '/project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar'}]
== 2024-06-13 13:05:36,790 easyblock.py:810 INFO Considering directory in which easyconfig file is located when searching for WRF-4.5.1_netCDF-Fortran_separate_path.patch: /tmp/eb-91hs2cy9/files_pr18741/w/WRF
== 2024-06-13 13:05:36,790 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/boegelbot/easybuild/easybuild-framework/eb
== 2024-06-13 13:05:36,790 tools.py:290 INFO Not considering /home/boegelbot/easybuild (no easybuild/easyconfigs subdir found)
== 2024-06-13 13:05:36,790 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs
== 2024-06-13 13:05:36,791 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-91hs2cy9/files_pr18741/easybuild/easyconfigs
== 2024-06-13 13:05:36,791 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-91hs2cy9/fake_vsc_g0a50r08/easybuild/easyconfigs
== 2024-06-13 13:05:36,791 tools.py:303 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs
== 2024-06-13 13:05:36,791 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.6/site-packages/git/ext/gitdb/easybuild/easyconfigs
== 2024-06-13 13:05:36,791 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-framework/easybuild/easyconfigs
== 2024-06-13 13:05:36,791 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyblocks/easybuild/easyconfigs
== 2024-06-13 13:05:36,791 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs
== 2024-06-13 13:05:36,791 tools.py:307 DEBUG Added /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2024-06-13 13:05:36,791 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python36.zip/easybuild/easyconfigs
== 2024-06-13 13:05:36,792 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.6/easybuild/easyconfigs
== 2024-06-13 13:05:36,792 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.6/lib-dynload/easybuild/easyconfigs
== 2024-06-13 13:05:36,792 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.6/site-packages/easybuild/easyconfigs
== 2024-06-13 13:05:36,792 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.6/site-packages/easybuild/easyconfigs
== 2024-06-13 13:05:36,792 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.6/site-packages/easybuild/easyconfigs
== 2024-06-13 13:05:36,792 tools.py:303 DEBUG Checking for easybuild/easyconfigs at /home/boegelbot/.local/lib/python3.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs
== 2024-06-13 13:05:36,792 easyblock.py:851 INFO Found file WRF-4.5.1_netCDF-Fortran_separate_path.patch at /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1_netCDF-Fortran_separate_path.patch
== 2024-06-13 13:05:36,792 easyblock.py:520 DEBUG File /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1_netCDF-Fortran_separate_path.patch found for patch WRF-4.5.1_netCDF-Fortran_separate_path.patch
== 2024-06-13 13:05:36,792 easyblock.py:535 INFO Added patches: [{'name': 'WRF-4.5.1_netCDF-Fortran_separate_path.patch', 'postinstall': False, 'path': '/tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1_netCDF-Fortran_separate_path.patch', 'checksum': {'WRF-4.5.1_netCDF-Fortran_separate_path.patch': '951bff9a3fc651482b287cc03a9f3197979b7800d515fe61cc9c932d9e0dc62e'}}]
== 2024-06-13 13:05:36,793 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum
== 2024-06-13 13:05:37,573 easyblock.py:2411 INFO md5 checksum for /project/boegelbot/sources/w/WRF/v4.5.1.tar.gz: b0f6d48d2271fb1391b28b7092920736
== 2024-06-13 13:05:37,574 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum
== 2024-06-13 13:05:37,855 easyblock.py:2411 INFO sha256 checksum for /project/boegelbot/sources/w/WRF/v4.5.1.tar.gz: 44e41a92f548ea5130930b8ea3a77c9fd3dba5e3bd9fdf782197f90e497545dc
== 2024-06-13 13:05:37,855 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum
== 2024-06-13 13:05:37,855 easyblock.py:2411 INFO md5 checksum for /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1_netCDF-Fortran_separate_path.patch: b773bfee632fa921cc225ef72d3ec682
== 2024-06-13 13:05:37,856 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum
== 2024-06-13 13:05:37,856 easyblock.py:2411 INFO sha256 checksum for /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1_netCDF-Fortran_separate_path.patch: 951bff9a3fc651482b287cc03a9f3197979b7800d515fe61cc9c932d9e0dc62e
== 2024-06-13 13:05:37,856 easyconfig.py:2642 DEBUG Determining full module name for WRF EasyConfig @ /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1-foss-2023a-dmpar.eb (force_visible: False)
== 2024-06-13 13:05:37,856 easyconfig.py:2619 DEBUG No alternative software name specified to determine module name with
== 2024-06-13 13:05:37,856 utilities.py:115 DEBUG Module name WRF/4.5.1-foss-2023a-dmpar validated
== 2024-06-13 13:05:37,856 easyconfig.py:2650 DEBUG Obtained valid full module name WRF/4.5.1-foss-2023a-dmpar
== 2024-06-13 13:05:37,856 config.py:700 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /project/boegelbot/Rocky8/haswell/modules
== 2024-06-13 13:05:37,857 easyblock.py:2446 INFO Checking dirs that need to be created: ['/project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar', '/project/boegelbot/Rocky8/haswell/modules/all/WRF', '/project/boegelbot/Rocky8/haswell/modules/geo/WRF']
== 2024-06-13 13:05:37,857 filetools.py:1931 DEBUG Not creating existing path /project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar
== 2024-06-13 13:05:37,857 filetools.py:1931 DEBUG Not creating existing path /project/boegelbot/Rocky8/haswell/modules/all/WRF
== 2024-06-13 13:05:37,858 filetools.py:1931 DEBUG Not creating existing path /project/boegelbot/Rocky8/haswell/modules/geo/WRF
== 2024-06-13 13:05:37,858 build_log.py:267 INFO ... (took 1 secs)
== 2024-06-13 13:05:37,858 easyblock.py:3942 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False)
== 2024-06-13 13:05:37,858 build_log.py:267 INFO creating build dir, resetting environment...
== 2024-06-13 13:05:37,858 easyblock.py:3950 INFO Starting ready step
== 2024-06-13 13:05:37,859 easyconfig.py:1702 INFO Generating template values...
== 2024-06-13 13:05:37,859 templates.py:201 DEBUG config: WRF EasyConfig @ /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1-foss-2023a-dmpar.eb
== 2024-06-13 13:05:37,859 templates.py:231 DEBUG version found in easyconfig is 4.5.1
== 2024-06-13 13:05:37,859 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s
== 2024-06-13 13:05:37,859 templates.py:333 DEBUG name: github_account, config: wrf-model
== 2024-06-13 13:05:37,859 templates.py:333 DEBUG name: name, config: WRF
== 2024-06-13 13:05:37,859 templates.py:333 DEBUG name: parallel, config: None
== 2024-06-13 13:05:37,859 templates.py:333 DEBUG name: version, config: 4.5.1
== 2024-06-13 13:05:37,859 templates.py:333 DEBUG name: versionsuffix, config: -dmpar
== 2024-06-13 13:05:37,860 templates.py:333 DEBUG name: versionprefix, config:
== 2024-06-13 13:05:37,860 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-06-13 13:05:37,860 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-06-13 13:05:37,860 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='wrf', builddir='/project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar', cuda_cc_cmake='70', cuda_cc_semicolon_sep='7.0', cuda_cc_space_sep='7.0', cuda_compute_capabilities='7.0', cuda_sm_comma_sep='sm_70', cuda_sm_space_sep='sm_70', github_account='wrf-model', installdir='/project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar', module_name='WRF/4.5.1-foss-2023a-dmpar', mpi_cmd_prefix='mpirun -n 1', name='WRF', nameletter='W', nameletterlower='w', namelower='wrf', perlmajver='5', perlminver='36', perlshortver='5.36', perlver='5.36.1', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2023a', version='4.5.1', version_major='4', version_major_minor='4.5', version_minor='5', versionprefix='', versionsuffix='-dmpar'
== 2024-06-13 13:05:37,860 easyblock.py:3958 INFO Running method check_readiness_step part of step ready
== 2024-06-13 13:05:37,860 easyblock.py:2246 DEBUG Desired parallelism specified via 'parallel' build option: None
== 2024-06-13 13:05:37,867 systemtools.py:247 DEBUG sched_getaffinity for pid 402092 successful
== 2024-06-13 13:05:37,867 run.py:221 DEBUG run_cmd: running cmd ulimit -u (in /home/boegelbot/boegelbot)
== 2024-06-13 13:05:37,868 run.py:247 INFO running cmd: ulimit -u
== 2024-06-13 13:05:37,872 run.py:689 DEBUG cmd "ulimit -u" exited with exit code 0 and output:
63694

== 2024-06-13 13:05:37,872 run.py:725 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w)
== 2024-06-13 13:05:37,873 easyblock.py:2255 INFO Setting parallelism: 4
== 2024-06-13 13:05:37,873 modules.py:814 DEBUG Current MODULEPATH: /project/boegelbot/Rocky8/haswell/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
== 2024-06-13 13:05:37,873 modules.py:824 DEBUG Changing LD_LIBRARY_PATH from '/opt/software/slurm/lib64' to '/opt/software/slurm/lib64:/opt/software/slurm/lib64' in environment for module command
== 2024-06-13 13:05:37,873 modules.py:828 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python --terse list' from /home/boegelbot/boegelbot
== 2024-06-13 13:05:37,911 modules.py:835 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python --terse list': stdout: import os
os.environ["MODULEPATH"] = "/project/boegelbot/Rocky8/haswell/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "czovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4Oi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZTovdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIiwKfQo=";
os.environ["_ModuleTable_Sz_"] = "2";
_mlstatus = True
; stderr: No modules loaded

== 2024-06-13 13:05:37,911 modules.py:1471 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python --terse list' ran fine
== 2024-06-13 13:05:37,912 easyblock.py:3958 INFO Running method make_builddir part of step ready
== 2024-06-13 13:05:37,912 easyblock.py:1068 INFO Overriding 'cleanupoldinstall' (to False), 'cleanupoldbuild' (to True) and 'keeppreviousinstall' because we're building in the installation directory.
== 2024-06-13 13:05:37,912 easyblock.py:1138 INFO Found old directory /project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar
== 2024-06-13 13:05:42,681 filetools.py:383 INFO Path /project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar successfully removed.
== 2024-06-13 13:05:42,681 easyblock.py:1146 INFO Removed old directory /project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar
== 2024-06-13 13:05:42,682 filetools.py:1912 INFO Creating directory /project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar (parents: True, set_gid: False, sticky: False)
== 2024-06-13 13:05:42,682 easyblock.py:3958 INFO Running method reset_env part of step ready
== 2024-06-13 13:05:42,683 easyblock.py:3958 INFO Running method handle_iterate_opts part of step ready
== 2024-06-13 13:05:42,683 easyconfig.py:1702 INFO Generating template values...
== 2024-06-13 13:05:42,683 templates.py:201 DEBUG config: WRF EasyConfig @ /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1-foss-2023a-dmpar.eb
== 2024-06-13 13:05:42,683 templates.py:231 DEBUG version found in easyconfig is 4.5.1
== 2024-06-13 13:05:42,683 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s
== 2024-06-13 13:05:42,684 templates.py:333 DEBUG name: github_account, config: wrf-model
== 2024-06-13 13:05:42,684 templates.py:333 DEBUG name: name, config: WRF
== 2024-06-13 13:05:42,684 templates.py:333 DEBUG name: parallel, config: 4
== 2024-06-13 13:05:42,684 templates.py:333 DEBUG name: version, config: 4.5.1
== 2024-06-13 13:05:42,684 templates.py:333 DEBUG name: versionsuffix, config: -dmpar
== 2024-06-13 13:05:42,684 templates.py:333 DEBUG name: versionprefix, config:
== 2024-06-13 13:05:42,684 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-06-13 13:05:42,684 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-06-13 13:05:42,685 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='wrf', builddir='/project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar', cuda_cc_cmake='70', cuda_cc_semicolon_sep='7.0', cuda_cc_space_sep='7.0', cuda_compute_capabilities='7.0', cuda_sm_comma_sep='sm_70', cuda_sm_space_sep='sm_70', github_account='wrf-model', installdir='/project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar', module_name='WRF/4.5.1-foss-2023a-dmpar', mpi_cmd_prefix='mpirun -n 1', name='WRF', nameletter='W', nameletterlower='w', namelower='wrf', parallel='4', perlmajver='5', perlminver='36', perlshortver='5.36', perlver='5.36.1', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2023a', version='4.5.1', version_major='4', version_major_minor='4.5', version_minor='5', versionprefix='', versionsuffix='-dmpar'
== 2024-06-13 13:05:42,685 build_log.py:267 INFO ... (took 4 secs)
== 2024-06-13 13:05:42,685 easyblock.py:3942 DEBUG Not skipping source step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False)
== 2024-06-13 13:05:42,685 build_log.py:267 INFO unpacking...
== 2024-06-13 13:05:42,685 easyblock.py:3950 INFO Starting source step
== 2024-06-13 13:05:42,686 easyconfig.py:1702 INFO Generating template values...
== 2024-06-13 13:05:42,686 templates.py:201 DEBUG config: WRF EasyConfig @ /tmp/eb-91hs2cy9/files_pr18741/w/WRF/WRF-4.5.1-foss-2023a-dmpar.eb
== 2024-06-13 13:05:42,686 templates.py:231 DEBUG version found in easyconfig is 4.5.1
== 2024-06-13 13:05:42,686 templates.py:333 DEBUG name: bitbucket_account, config: %(namelower)s
== 2024-06-13 13:05:42,686 templates.py:333 DEBUG name: github_account, config: wrf-model
== 2024-06-13 13:05:42,686 templates.py:333 DEBUG name: name, config: WRF
== 2024-06-13 13:05:42,686 templates.py:333 DEBUG name: parallel, config: 4
== 2024-06-13 13:05:42,686 templates.py:333 DEBUG name: version, config: 4.5.1
== 2024-06-13 13:05:42,687 templates.py:333 DEBUG name: versionsuffix, config: -dmpar
== 2024-06-13 13:05:42,687 templates.py:333 DEBUG name: versionprefix, config:
== 2024-06-13 13:05:42,687 mpi.py:122 INFO Using template MPI command 'mpirun -n %(nr_ranks)s %(cmd)s' for MPI family 'OpenMPI'
== 2024-06-13 13:05:42,687 mpi.py:307 INFO Using MPI command template 'mpirun -n %(nr_ranks)s %(cmd)s' (params: {'nr_ranks': 1, 'cmd': 'xxx_command_xxx'})
== 2024-06-13 13:05:42,687 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='wrf', builddir='/project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar', cuda_cc_cmake='70', cuda_cc_semicolon_sep='7.0', cuda_cc_space_sep='7.0', cuda_compute_capabilities='7.0', cuda_sm_comma_sep='sm_70', cuda_sm_space_sep='sm_70', github_account='wrf-model', installdir='/project/boegelbot/Rocky8/haswell/software/WRF/4.5.1-foss-2023a-dmpar', module_name='WRF/4.5.1-foss-2023a-dmpar', mpi_cmd_prefix='mpirun -n 1', name='WRF', nameletter='W', nameletterlower='w', namelower='wrf', parallel='4', perlmajver='5', perlminver='36', perlshortver='5.36', perlver='5.36.1', start_dir='None', sysroot='', toolchain_name='foss', toolchain_version='2023a', version='4.5.1', version_major='4', version_major_minor='4.5', version_minor='5', versionprefix='', versionsuffix='-dmpar'
== 2024-06-13 13:05:42,687 easyblock.py:3958 INFO Running method checksum_step part of step source
== 2024-06-13 13:05:42,687 filetools.py:1233 DEBUG Using blocksize 16777216 for calculating the checksum
== 2024-06-13 13:05:42,976 filetools.py:1307 DEBUG Computed sha256 checksum for /project/boegelbot/sources/w/WRF/v4.5.1.tar.gz: 44e41a92f548ea5130930b8ea3a77c9fd3dba5e3bd9fdf782197f90e497545dc (correct checksum: 9d557c34c105db4d41e727843ecb19199233c7cf82c5369b34a2ce8efe65e2d1)
== 2024-06-13 13:05:43,118 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/easybuild-framework/easybuild/base/exceptions.py:126 in __init__): Checksum verification for /project/boegelbot/sources/w/WRF/v4.5.1.tar.gz using {'v4.5.1.tar.gz': '9d557c34c105db4d41e727843ecb19199233c7cf82c5369b34a2ce8efe65e2d1'} failed. (at easybuild/easybuild-framework/easybuild/framework/easyblock.py:2468 in checksum_step)
== 2024-06-13 13:05:43,118 build_log.py:267 INFO ... (took < 1 sec)
== 2024-06-13 13:05:43,118 config.py:700 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/boegelbot/Rocky8/haswell/software
== 2024-06-13 13:05:43,118 filetools.py:2013 INFO Removing lock /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_WRF_4.5.1-foss-2023a-dmpar.lock...
== 2024-06-13 13:05:43,119 filetools.py:383 INFO Path /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_WRF_4.5.1-foss-2023a-dmpar.lock successfully removed.
== 2024-06-13 13:05:43,120 filetools.py:2017 INFO Lock removed: /project/boegelbot/Rocky8/haswell/software/.locks/_project_boegelbot_Rocky8_haswell_software_WRF_4.5.1-foss-2023a-dmpar.lock
== 2024-06-13 13:05:43,120 easyblock.py:4285 WARNING build failed (first 300 chars): Checksum verification for /project/boegelbot/sources/w/WRF/v4.5.1.tar.gz using {'v4.5.1.tar.gz': '9d557c34c105db4d41e727843ecb19199233c7cf82c5369b34a2ce8efe65e2d1'} failed.
== 2024-06-13 13:05:43,120 easyblock.py:328 INFO Closing log for application name WRF version 4.5.1