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(partial) EasyBuild log for failed build of /home/boegelbot/easybuild/easybuild-easyconfigs/easybuild/easyconfigs/s/shovill/shovill-1.1.0-gompi-2021b.eb (PR(s) #18236)
sysbench/1.0.20-GCC-12.2.0
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tantan/40-GCC-11.2.0
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tbl2asn/20220427-linux64
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zlib/1.2.12-GCCcore-9.5.0
zlib/1.2.12-GCCcore-11.3.0
zlib/1.2.12-GCCcore-12.1.0
zlib/1.2.12-GCCcore-12.2.0
zlib/1.2.12
zlib/1.2.13-GCCcore-11.4.0
zlib/1.2.13-GCCcore-12.3.0
zlib/1.2.13-GCCcore-13.1.0
zlib/1.2.13
Zopfli/1.0.3-GCCcore-11.3.0
zsh/5.9
zstd/1.4.4-GCCcore-8.3.0
zstd/1.4.4-GCCcore-9.3.0
zstd/1.4.5-GCCcore-10.2.0
zstd/1.4.9-GCCcore-10.3.0
zstd/1.5.0-GCCcore-11.2.0
zstd/1.5.2-GCCcore-11.3.0
zstd/1.5.2-GCCcore-12.2.0
zstd/1.5.5-GCCcore-12.3.0
== 2023-06-29 17:04:23,584 modules.py:1375 DEBUG Output found in stdout, seems like '/cvmfs/soft.computecanada.ca/custom/software/lmod/lmod/libexec/lmod python --terse --show-hidden avail ' ran fine
== 2023-06-29 17:04:23,597 modules.py:498 DEBUG 'module available ' gave 4038 answers: ['3d-dna/180922-GCCcore-8.2.0-Python-2.7.15', 'ABINIT/9.2.1-foss-2019b', 'ABINIT/9.6.2-foss-2022a', 'ABINIT/9.6.2-intel-2022a', 'ADIOS/1.13.1-foss-2020a-Python-3.8.2', 'ADIOS/20210804-foss-2020a-Python-3.8.2', 'AGAT/1.1.0-GCC-12.2.0', 'AMOS/3.1.0-foss-2021b', 'AMPtk/1.5.4-foss-2021b', 'ANIcalculator/1.0-GCCcore-10.3.0', 'ANIcalculator/1.0-GCCcore-11.3.0', 'ANTLR/2.7.7-GCCcore-10.3.0-Java-11', 'ANTLR/2.7.7-GCCcore-11.3.0-Java-11', 'ANTs/2.3.5-foss-2021a', 'AOCC/3.2.0-GCCcore-11.2.0', 'AOCC/3.2.0-GCCcore-11.3.0', 'AOCC/4.0.0-GCCcore-11.3.0', 'AOCC/4.0.0-GCCcore-12.2.0', 'APR-util/1.6.1-GCCcore-11.3.0', 'APR/1.7.0-GCCcore-11.3.0', 'ARGoS/3.0.0-beta59-GCC-11.2.0', 'ASCAT/3.1.2-foss-2022a-R-4.2.1', 'ASE/3.22.0-foss-2021a', 'ASE/3.22.1-foss-2022a', 'ASE/3.22.1-foss-2022b', 'ASE/3.22.1-intel-2022a', 'ASF-SearchAPI/6.5.0-foss-2022a', 'ATAT/3.36-GCCcore-9.3.0', 'ATK/2.32.0-GCCcore-8.2.0', 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'zarr/2.13.3-foss-2022a', 'zfp/1.0.0-GCCcore-11.3.0', 'zfp/1.0.0-GCCcore-9.3.0', 'zlib-ng/2.0.7-GCCcore-11.3.0', 'zlib/1.2.11', 'zlib/1.2.11-GCCcore-10.1.0', 'zlib/1.2.11-GCCcore-10.2.0', 'zlib/1.2.11-GCCcore-10.3.0', 'zlib/1.2.11-GCCcore-11.2.0', 'zlib/1.2.11-GCCcore-7.3.0', 'zlib/1.2.11-GCCcore-8.2.0', 'zlib/1.2.11-GCCcore-8.3.0', 'zlib/1.2.11-GCCcore-9.3.0', 'zlib/1.2.12', 'zlib/1.2.12-GCCcore-11.3.0', 'zlib/1.2.12-GCCcore-12.1.0', 'zlib/1.2.12-GCCcore-12.2.0', 'zlib/1.2.12-GCCcore-9.5.0', 'zlib/1.2.13', 'zlib/1.2.13-GCCcore-11.4.0', 'zlib/1.2.13-GCCcore-12.3.0', 'zlib/1.2.13-GCCcore-13.1.0', 'zlib/1.2.8', 'zsh/5.9', 'zstd/1.4.4-GCCcore-8.3.0', 'zstd/1.4.4-GCCcore-9.3.0', 'zstd/1.4.5-GCCcore-10.2.0', 'zstd/1.4.9-GCCcore-10.3.0', 'zstd/1.5.0-GCCcore-11.2.0', 'zstd/1.5.2-GCCcore-11.3.0', 'zstd/1.5.2-GCCcore-12.2.0', 'zstd/1.5.5-GCCcore-12.3.0']
== 2023-06-29 17:04:23,597 modules.py:502 DEBUG Cached result for 'module avail' with key '('MODULEPATH=/project/def-maintainers/boegelbot/Rocky8/zen2/modules/all', 'lmod', '--show-hidden')': ['3d-dna/180922-GCCcore-8.2.0-Python-2.7.15', 'ABINIT/9.2.1-foss-2019b', 'ABINIT/9.6.2-foss-2022a', 'ABINIT/9.6.2-intel-2022a', 'ADIOS/1.13.1-foss-2020a-Python-3.8.2', 'ADIOS/20210804-foss-2020a-Python-3.8.2', 'AGAT/1.1.0-GCC-12.2.0', 'AMOS/3.1.0-foss-2021b', 'AMPtk/1.5.4-foss-2021b', 'ANIcalculator/1.0-GCCcore-10.3.0', 'ANIcalculator/1.0-GCCcore-11.3.0', 'ANTLR/2.7.7-GCCcore-10.3.0-Java-11', 'ANTLR/2.7.7-GCCcore-11.3.0-Java-11', 'ANTs/2.3.5-foss-2021a', 'AOCC/3.2.0-GCCcore-11.2.0', 'AOCC/3.2.0-GCCcore-11.3.0', 'AOCC/4.0.0-GCCcore-11.3.0', 'AOCC/4.0.0-GCCcore-12.2.0', 'APR-util/1.6.1-GCCcore-11.3.0', 'APR/1.7.0-GCCcore-11.3.0', 'ARGoS/3.0.0-beta59-GCC-11.2.0', 'ASCAT/3.1.2-foss-2022a-R-4.2.1', 'ASE/3.22.0-foss-2021a', 'ASE/3.22.1-foss-2022a', 'ASE/3.22.1-foss-2022b', 'ASE/3.22.1-intel-2022a', 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'silhouetteRank/1.0.5.13-foss-2022a', 'simint/0.7-GCC-11.2.0-lmax-5-vec-avx-psi4', 'simint/0.7-GCCcore-11.2.0-lmax-5-vec-avx-psi4', 'siscone/3.0.5-GCCcore-11.3.0', 'sklearn-pandas/2.2.0-foss-2021b', 'skorch/0.11.0-foss-2021a-PyTorch-1.10.0', 'skorch/0.11.0-foss-2021a-PyTorch-1.10.0-CUDA-11.3.1', 'slamdunk/0.4.3-foss-2021b', 'slepc4py/3.15.1-foss-2021a', 'smfishHmrf/1.3.3-foss-2022a', 'smithwaterman/20160702-GCCcore-10.3.0', 'smithwaterman/20160702-GCCcore-11.2.0', 'snakemake/6.10.0-foss-2021b', 'snakemake/6.6.1-foss-2021a', 'snakemake/7.18.2-foss-2021b', 'snakemake/7.22.0-foss-2022a', 'snappy/1.1.10-GCCcore-12.3.0', 'snappy/1.1.7-GCCcore-8.3.0', 'snappy/1.1.8-GCCcore-10.2.0', 'snappy/1.1.8-GCCcore-10.3.0', 'snappy/1.1.8-GCCcore-9.3.0', 'snappy/1.1.9-GCCcore-11.2.0', 'snappy/1.1.9-GCCcore-11.3.0', 'snappy/1.1.9-GCCcore-12.2.0', 'snippy/4.6.0-foss-2021b-R-4.1.2', 'snp-sites/2.5.1-GCCcore-11.2.0', 'snpEff/5.0e-GCCcore-11.2.0-Java-11', 'spaCy/3.4.4-foss-2022a', 'spaln/2.4.12-GCC-10.2.0', 'spaln/2.4.12-GCC-11.2.0', 'spaln/2.4.13f-GCC-11.3.0', 'sparse-neighbors-search/0.7-foss-2022a', 'spdlog/1.11.0-GCCcore-12.2.0', 'spdlog/1.11.0-GCCcore-12.3.0', 'spdlog/1.9.2-GCCcore-10.3.0', 'spektral/1.1.0-foss-2021b-CUDA-11.4.1', 'spglib-python/1.16.1-foss-2021a', 'spglib-python/2.0.0-foss-2022a', 'spglib-python/2.0.0-intel-2022a', 'spglib-python/2.0.2-gfbf-2022b', 'spglib/2.0.2-GCCcore-11.3.0', 'spoa/4.0.7-GCC-10.2.0', 'spoa/4.0.7-GCC-10.3.0', 'spoa/4.0.7-GCC-11.2.0', 'spoa/4.0.7-GCC-11.3.0', 'spoa/4.0.7-GCC-12.2.0', 'stardist/0.8.3-foss-2021b', 'statsmodels/0.12.2-foss-2021a', 'statsmodels/0.13.1-foss-2021b', 'statsmodels/0.13.1-foss-2022a', 'statsmodels/0.13.1-intel-2021b', 'statsmodels/0.14.0-gfbf-2022b', 'stitch/16Jan23-foss-2022a', 'stripy/2.1.0-foss-2021a', 'subset-bam/1.1.0-GCCcore-10.3.0', 'sympy/1.10.1-foss-2022a', 'sympy/1.10.1-intel-2022a', 'sympy/1.11.1-foss-2022a', 'sympy/1.11.1-intel-2022a', 'sympy/1.8-foss-2021a', 'sympy/1.9-foss-2021b', 'sympy/1.9-intel-2021b', 'sysbench/1.0.20-GCC-12.2.0', 'tRNAscan-SE/2.0.12-GCC-11.2.0', 'tRNAscan-SE/2.0.12-foss-2022b', 'tabixpp/1.1.0-GCC-10.3.0', 'tabixpp/1.1.0-GCC-11.2.0', 'tantan/40-GCC-11.2.0', 'task-spooler/1.0.2-GCCcore-11.3.0', 'tbb/2020.3-GCCcore-10.2.0', 'tbb/2020.3-GCCcore-10.3.0', 'tbb/2020.3-GCCcore-11.2.0', 'tbb/2021.4.0-GCCcore-10.3.0', 'tbb/2021.4.0-GCCcore-11.2.0', 'tbb/2021.5.0-GCCcore-11.3.0', 'tbl2asn/20220427-linux64', 'tcsh/6.24.01-GCCcore-11.3.0', 'tcsh/6.24.07-GCCcore-12.2.0', 'tensorboard/2.10.0-foss-2022a', 'tensorboard/2.8.0-foss-2021a', 'tensorboardX/2.5.1-foss-2022a', 'tesseract/5.3.0-GCCcore-11.3.0', 'texinfo/6.7-GCCcore-10.2.0', 'texinfo/7.0.2-GCCcore-11.3.0', 'texlive/20230313-GCCcore-12.2.0', 'thirdorder/1.1.1-foss-2022a', 'tidymodels/1.1.0-foss-2022b', 'time/1.9-GCCcore-11.3.0', 'time/1.9-GCCcore-12.2.0', 'tmux/2.3', 'tmux/3.3a', 'tmux/3.3a-GCCcore-11.3.0', 'tmux/3.3a-GCCcore-12.2.0', 'tmux/3.3a-GCCcore-12.3.0', 'toil/5.8.0-foss-2021a', 'tokenizers/0.13.3-GCCcore-12.2.0', 'topaz/0.2.5-foss-2021a', 'torchaudio/0.12.0-foss-2022a-PyTorch-1.12.0', 'torchaudio/0.12.0-foss-2022a-PyTorch-1.12.0-CUDA-11.7.0', 'torchtext/0.14.1-foss-2022a-PyTorch-1.12.0', 'torchvision/0.11.1-foss-2021a-CUDA-11.3.1', 'torchvision/0.11.3-foss-2021a', 'torchvision/0.11.3-foss-2021a-CUDA-11.3.1', 'torchvision/0.13.1-foss-2022a', 'torchvision/0.13.1-foss-2022a-CUDA-11.7.0', 'tqdm/4.41.1-GCCcore-8.3.0', 'tqdm/4.56.2-GCCcore-10.2.0', 'tqdm/4.61.2-GCCcore-10.3.0', 'tqdm/4.62.3-GCCcore-11.2.0', 'tqdm/4.64.0-GCCcore-11.3.0', 'tqdm/4.64.1-GCCcore-12.2.0', 'trimAl/1.4.1-GCCcore-11.2.0', 'trimAl/1.4.1-GCCcore-11.3.0', 'trimesh/3.17.1-foss-2022a', 'trimesh/3.21.5-gfbf-2022b', 'typing-extensions/3.10.0.0-GCCcore-10.3.0', 'typing-extensions/3.10.0.2-GCCcore-11.2.0', 'typing-extensions/3.7.4.3-GCCcore-10.2.0', 'typing-extensions/4.3.0-GCCcore-11.3.0', 'umap-learn/0.4.6-foss-2020b', 'umap-learn/0.5.3-foss-2021a', 'umap-learn/0.5.3-foss-2021b', 'umap-learn/0.5.3-foss-2022a', 'unicore-uftp/1.4.2-Java-11', 'utf8proc/2.7.0-GCCcore-11.3.0', 'utf8proc/2.8.0-GCCcore-12.2.0', 'utf8proc/2.8.0-GCCcore-12.3.0', 'util-linux/2.32-GCCcore-7.3.0', 'util-linux/2.33-GCCcore-8.2.0', 'util-linux/2.34-GCCcore-8.3.0', 'util-linux/2.35-GCCcore-9.3.0', 'util-linux/2.36-GCCcore-10.2.0', 'util-linux/2.36-GCCcore-10.3.0', 'util-linux/2.37-GCCcore-11.2.0', 'util-linux/2.38-GCCcore-11.3.0', 'util-linux/2.38.1-GCCcore-12.2.0', 'util-linux/2.39-GCCcore-12.3.0', 'vConTACT2/0.11.3-foss-2022a', 'vcflib/1.0.3-foss-2021a-R-4.1.0', 'vcflib/1.0.3-foss-2021b-R-4.1.2', 'velocyto/0.17.17-foss-2021a', 'velocyto/0.17.17-foss-2022a', 'visdom/0.2.4-foss-2022a', 'vispr/0.4.14-foss-2022a', 'vitessce-python/20230222-foss-2022a', 'vitessceR/0.99.0-20230110-foss-2022a-R-4.2.1', 'vitessceR/20230110-foss-2022a-R-4.2.1', 'vsc-mympirun/5.2.11', 'vsc-mympirun/5.3.0', 'vt/0.57721-GCC-10.3.0', 'vt/0.57721-GCC-11.2.0', 'wandb/0.13.4-GCCcore-11.3.0', 'wandb/0.13.6-GCC-11.3.0', 'wget/1.20.3-GCCcore-10.2.0', 'wget/1.21.1-GCCcore-10.3.0', 'wget/1.21.2-GCCcore-11.2.0', 'wget/1.21.3-GCCcore-11.3.0', 'wgsim/20111017-GCC-11.2.0', 'wpebackend-fdo/1.13.1-GCCcore-11.2.0', 'wrapt/1.15.0-foss-2022a', 'wrapt/1.15.0-intel-2022a', 'wtdbg2/2.5-GCCcore-11.2.0', 'wtdbg2/2.5-GCCcore-11.3.0', 'wxPython/4.1.1-foss-2021a', 'wxWidgets/3.1.5-GCC-10.3.0', 'wxWidgets/3.2.1-GCC-11.3.0', 'wxWidgets/3.2.2.1-GCCcore-12.2.0', 'x13as/1-1-b59-GCCcore-11.2.0', 'x264/20190925-GCCcore-8.3.0', 'x264/20201026-GCCcore-10.2.0', 'x264/20210414-GCCcore-10.3.0', 'x264/20210613-GCCcore-11.2.0', 'x264/20220620-GCCcore-11.3.0', 'x264/20230226-GCCcore-12.2.0', 'x265/3.2-GCCcore-8.3.0', 'x265/3.3-GCCcore-10.2.0', 'x265/3.5-GCCcore-10.3.0', 'x265/3.5-GCCcore-11.2.0', 'x265/3.5-GCCcore-11.3.0', 'x265/3.5-GCCcore-12.2.0', 'xarray/0.16.1-foss-2020a-Python-3.8.2', 'xarray/0.19.0-foss-2021a', 'xarray/0.20.1-foss-2021b', 'xarray/0.20.1-intel-2021b', 'xarray/2022.6.0-foss-2022a', 'xarray/2023.4.2-gfbf-2022b', 'xclip/0.13-GCCcore-11.3.0', 'xdotool/3.20211022.1-GCCcore-11.3.0', 'xorg-macros/1.19.2-GCCcore-10.2.0', 'xorg-macros/1.19.2-GCCcore-7.3.0', 'xorg-macros/1.19.2-GCCcore-8.2.0', 'xorg-macros/1.19.2-GCCcore-8.3.0', 'xorg-macros/1.19.2-GCCcore-9.3.0', 'xorg-macros/1.19.3-GCCcore-10.3.0', 'xorg-macros/1.19.3-GCCcore-11.2.0', 'xorg-macros/1.19.3-GCCcore-11.3.0', 'xorg-macros/1.19.3-GCCcore-12.2.0', 'xorg-macros/1.20.0-GCCcore-12.3.0', 'xprop/1.2.5-GCCcore-10.2.0', 'xprop/1.2.5-GCCcore-10.3.0', 'xprop/1.2.5-GCCcore-11.3.0', 'xproto/7.0.31-GCCcore-10.2.0', 'xproto/7.0.31-GCCcore-10.3.0', 'xproto/7.0.31-GCCcore-11.3.0', 'xtb/6.4.1-foss-2021b', 'xtb/6.4.1-intel-2021a', 'xtb/6.5.0-foss-2021b', 'xtrans/1.3.5-GCCcore-11.3.0', 'xxHash/0.8.1-GCCcore-12.2.0', 'xxd/8.2.4220-GCCcore-10.2.0', 'xxd/8.2.4220-GCCcore-10.3.0', 'xxd/8.2.4220-GCCcore-11.2.0', 'xxd/8.2.4220-GCCcore-11.3.0', 'yaml-cpp/0.7.0-GCCcore-11.3.0', 'yaml-cpp/0.7.0-GCCcore-12.2.0', 'yaml-cpp/0.7.0-GCCcore-12.3.0', 'zarr/2.10.1-foss-2021a', 'zarr/2.13.3-foss-2021b', 'zarr/2.13.3-foss-2022a', 'zfp/1.0.0-GCCcore-11.3.0', 'zfp/1.0.0-GCCcore-9.3.0', 'zlib-ng/2.0.7-GCCcore-11.3.0', 'zlib/1.2.11', 'zlib/1.2.11-GCCcore-10.1.0', 'zlib/1.2.11-GCCcore-10.2.0', 'zlib/1.2.11-GCCcore-10.3.0', 'zlib/1.2.11-GCCcore-11.2.0', 'zlib/1.2.11-GCCcore-7.3.0', 'zlib/1.2.11-GCCcore-8.2.0', 'zlib/1.2.11-GCCcore-8.3.0', 'zlib/1.2.11-GCCcore-9.3.0', 'zlib/1.2.12', 'zlib/1.2.12-GCCcore-11.3.0', 'zlib/1.2.12-GCCcore-12.1.0', 'zlib/1.2.12-GCCcore-12.2.0', 'zlib/1.2.12-GCCcore-9.5.0', 'zlib/1.2.13', 'zlib/1.2.13-GCCcore-11.4.0', 'zlib/1.2.13-GCCcore-12.3.0', 'zlib/1.2.13-GCCcore-13.1.0', 'zlib/1.2.8', 'zsh/5.9', 'zstd/1.4.4-GCCcore-8.3.0', 'zstd/1.4.4-GCCcore-9.3.0', 'zstd/1.4.5-GCCcore-10.2.0', 'zstd/1.4.9-GCCcore-10.3.0', 'zstd/1.5.0-GCCcore-11.2.0', 'zstd/1.5.2-GCCcore-11.3.0', 'zstd/1.5.2-GCCcore-12.2.0', 'zstd/1.5.5-GCCcore-12.3.0']
== 2023-06-29 17:04:23,600 modules.py:626 INFO Checking whether SAMtools/1.14-GCC-11.2.0 exists...
== 2023-06-29 17:04:23,600 modules.py:631 INFO Module SAMtools/1.14-GCC-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:23,600 modules.py:654 INFO Result for existence check of SAMtools/1.14-GCC-11.2.0 module: True
== 2023-06-29 17:04:23,600 modules.py:626 INFO Checking whether BWA/0.7.17-GCCcore-11.2.0 exists...
== 2023-06-29 17:04:23,600 modules.py:631 INFO Module BWA/0.7.17-GCCcore-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:23,600 modules.py:654 INFO Result for existence check of BWA/0.7.17-GCCcore-11.2.0 module: True
== 2023-06-29 17:04:23,600 modules.py:626 INFO Checking whether Mash/2.3-GCC-11.2.0 exists...
== 2023-06-29 17:04:23,600 modules.py:631 INFO Module Mash/2.3-GCC-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:23,600 modules.py:654 INFO Result for existence check of Mash/2.3-GCC-11.2.0 module: True
== 2023-06-29 17:04:23,600 modules.py:626 INFO Checking whether seqtk/1.3-GCC-11.2.0 exists...
== 2023-06-29 17:04:23,600 modules.py:631 INFO Module seqtk/1.3-GCC-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:23,600 modules.py:654 INFO Result for existence check of seqtk/1.3-GCC-11.2.0 module: True
== 2023-06-29 17:04:23,601 modules.py:626 INFO Checking whether SKESA/2.4.0-gompi-2021b_saute.1.3.0_1 exists...
== 2023-06-29 17:04:23,601 modules.py:631 INFO Module SKESA/2.4.0-gompi-2021b_saute.1.3.0_1 exists (found in list of available modules)
== 2023-06-29 17:04:23,601 modules.py:654 INFO Result for existence check of SKESA/2.4.0-gompi-2021b_saute.1.3.0_1 module: True
== 2023-06-29 17:04:23,601 modules.py:626 INFO Checking whether MEGAHIT/1.2.9-GCCcore-11.2.0 exists...
== 2023-06-29 17:04:23,601 modules.py:631 INFO Module MEGAHIT/1.2.9-GCCcore-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:23,601 modules.py:654 INFO Result for existence check of MEGAHIT/1.2.9-GCCcore-11.2.0 module: True
== 2023-06-29 17:04:23,601 modules.py:626 INFO Checking whether KMC/3.2.1-GCC-11.2.0 exists...
== 2023-06-29 17:04:23,601 modules.py:631 INFO Module KMC/3.2.1-GCC-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:23,601 modules.py:654 INFO Result for existence check of KMC/3.2.1-GCC-11.2.0 module: True
== 2023-06-29 17:04:23,601 modules.py:626 INFO Checking whether Pilon/1.23-Java-11 exists...
== 2023-06-29 17:04:23,601 modules.py:631 INFO Module Pilon/1.23-Java-11 exists (found in list of available modules)
== 2023-06-29 17:04:23,601 modules.py:654 INFO Result for existence check of Pilon/1.23-Java-11 module: True
== 2023-06-29 17:04:23,601 modules.py:626 INFO Checking whether SPAdes/3.15.3-GCC-11.2.0 exists...
== 2023-06-29 17:04:23,601 modules.py:631 INFO Module SPAdes/3.15.3-GCC-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:23,601 modules.py:654 INFO Result for existence check of SPAdes/3.15.3-GCC-11.2.0 module: True
== 2023-06-29 17:04:23,601 modules.py:626 INFO Checking whether Lighter/1.1.2-GCC-11.2.0 exists...
== 2023-06-29 17:04:23,601 modules.py:631 INFO Module Lighter/1.1.2-GCC-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:23,602 modules.py:654 INFO Result for existence check of Lighter/1.1.2-GCC-11.2.0 module: True
== 2023-06-29 17:04:23,602 modules.py:626 INFO Checking whether FLASH/2.2.00-GCC-11.2.0 exists...
== 2023-06-29 17:04:23,602 modules.py:631 INFO Module FLASH/2.2.00-GCC-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:23,602 modules.py:654 INFO Result for existence check of FLASH/2.2.00-GCC-11.2.0 module: True
== 2023-06-29 17:04:23,602 modules.py:626 INFO Checking whether Trimmomatic/0.39-Java-11 exists...
== 2023-06-29 17:04:23,602 modules.py:631 INFO Module Trimmomatic/0.39-Java-11 exists (found in list of available modules)
== 2023-06-29 17:04:23,602 modules.py:654 INFO Result for existence check of Trimmomatic/0.39-Java-11 module: True
== 2023-06-29 17:04:23,602 modules.py:626 INFO Checking whether Velvet/1.2.10-GCC-11.2.0-mt-kmer_191 exists...
== 2023-06-29 17:04:23,602 modules.py:634 INFO Module Velvet/1.2.10-GCC-11.2.0-mt-kmer_191 not found in list of available modules, checking via 'module show'...
== 2023-06-29 17:04:23,602 modules.py:570 DEBUG Checking whether Velvet/1.2.10-GCC-11.2.0-mt-kmer_191 exists based on output of 'module show'
== 2023-06-29 17:04:23,602 modules.py:812 DEBUG Current MODULEPATH: /project/def-maintainers/boegelbot/Rocky8/zen2/modules/all
== 2023-06-29 17:04:23,602 modules.py:826 DEBUG Running module command '/cvmfs/soft.computecanada.ca/custom/software/lmod/lmod/libexec/lmod python show Velvet/1.2.10-GCC-11.2.0-mt-kmer_191' from /tmp/boegelbot/shovill/1.1.0/gompi-2021b/shovill-1.1.0
== 2023-06-29 17:04:24,316 modules.py:833 DEBUG Output of module command '/cvmfs/soft.computecanada.ca/custom/software/lmod/lmod/libexec/lmod python show Velvet/1.2.10-GCC-11.2.0-mt-kmer_191': stdout: import os
os.environ["MODULEPATH"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/modules/all";
os.environ["_ModuleTable001_"] = "X01vZHVsZVRhYmxlXyA9IHsKTVR2ZXJzaW9uID0gMywKY19yZWJ1aWxkVGltZSA9IGZhbHNlLApjX3Nob3J0VGltZSA9IGZhbHNlLApkZXB0aFQgPSB7fSwKZmFtaWx5ID0ge30sCm1UID0ge30sCm1wYXRoQSA9IHsKIi9wcm9qZWN0L2RlZi1tYWludGFpbmVycy9ib2VnZWxib3QvUm9ja3k4L3plbjIvbW9kdWxlcy9hbGwiLAp9LApzeXN0ZW1CYXNlTVBBVEggPSAiL2N2bWZzL3NvZnQuY29tcHV0ZWNhbmFkYS5jYS9jdXN0b20vbW9kdWxlcyIsCn0K";
os.environ["_ModuleTable_Sz_"] = "1";
_mlstatus = True
; stderr:
== 2023-06-29 17:04:24,316 modules.py:721 DEBUG Cached result for 'module show Velvet/1.2.10-GCC-11.2.0-mt-kmer_191' with key '('MODULEPATH=/project/def-maintainers/boegelbot/Rocky8/zen2/modules/all', 'lmod', 'Velvet/1.2.10-GCC-11.2.0-mt-kmer_191')':
== 2023-06-29 17:04:24,316 modules.py:580 DEBUG Checking line '' to determine whether Velvet/1.2.10-GCC-11.2.0-mt-kmer_191 exists...
== 2023-06-29 17:04:24,317 modules.py:584 DEBUG Treating line '' as whitespace, so skipping it
== 2023-06-29 17:04:24,317 modules.py:647 INFO Module Velvet/1.2.10-GCC-11.2.0-mt-kmer_191 not found via module avail/show, checking whether it is a wrapper
== 2023-06-29 17:04:24,318 modules.py:654 INFO Result for existence check of Velvet/1.2.10-GCC-11.2.0-mt-kmer_191 module: False
== 2023-06-29 17:04:24,318 modules.py:626 INFO Checking whether pigz/2.6-GCCcore-11.2.0 exists...
== 2023-06-29 17:04:24,318 modules.py:631 INFO Module pigz/2.6-GCCcore-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:24,318 modules.py:654 INFO Result for existence check of pigz/2.6-GCCcore-11.2.0 module: True
== 2023-06-29 17:04:24,318 modules.py:626 INFO Checking whether samclip/0.4.0-GCCcore-11.2.0 exists...
== 2023-06-29 17:04:24,319 modules.py:631 INFO Module samclip/0.4.0-GCCcore-11.2.0 exists (found in list of available modules)
== 2023-06-29 17:04:24,319 modules.py:654 INFO Result for existence check of samclip/0.4.0-GCCcore-11.2.0 module: True
== 2023-06-29 17:04:24,324 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/easybuild-framework/easybuild/base/exceptions.py:126 in __init__): Missing modules for dependencies (use --robot?): Velvet/1.2.10-GCC-11.2.0-mt-kmer_191 (at easybuild/easybuild-framework/easybuild/tools/toolchain/toolchain.py:559 in _check_dependencies)
== 2023-06-29 17:04:24,324 build_log.py:267 INFO ... (took 2 secs)
== 2023-06-29 17:04:24,324 config.py:694 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/def-maintainers/boegelbot/Rocky8/zen2/software
== 2023-06-29 17:04:24,324 filetools.py:2014 INFO Removing lock /project/def-maintainers/boegelbot/Rocky8/zen2/software/.locks/_project_def-maintainers_boegelbot_Rocky8_zen2_software_shovill_1.1.0-gompi-2021b.lock...
== 2023-06-29 17:04:24,325 filetools.py:383 INFO Path /project/def-maintainers/boegelbot/Rocky8/zen2/software/.locks/_project_def-maintainers_boegelbot_Rocky8_zen2_software_shovill_1.1.0-gompi-2021b.lock successfully removed.
== 2023-06-29 17:04:24,325 filetools.py:2018 INFO Lock removed: /project/def-maintainers/boegelbot/Rocky8/zen2/software/.locks/_project_def-maintainers_boegelbot_Rocky8_zen2_software_shovill_1.1.0-gompi-2021b.lock
== 2023-06-29 17:04:24,325 easyblock.py:4257 WARNING build failed (first 300 chars): Missing modules for dependencies (use --robot?): Velvet/1.2.10-GCC-11.2.0-mt-kmer_191
== 2023-06-29 17:04:24,325 easyblock.py:328 INFO Closing log for application name shovill version 1.1.0
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