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August 22, 2023 17:30
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(partial) EasyBuild log for failed build of /tmp/eb-g82pvl25/files_pr18615/l/leafcutter/leafcutter-0.2.9-foss-2022b-R-4.2.2.eb (PR(s) #18615)
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| os.environ["EBDEVELLIBUNWIND"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libunwind/1.6.2-GCCcore-12.2.0/easybuild/libunwind-1.6.2-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELLIBVORBIS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libvorbis/1.3.7-GCCcore-12.2.0/easybuild/libvorbis-1.3.7-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELLIBXML2"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libxml2/2.10.3-GCCcore-12.2.0/easybuild/libxml2-2.10.3-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELLIBYAML"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libyaml/0.2.5-GCCcore-12.2.0/easybuild/libyaml-0.2.5-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELLITTLECMS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/LittleCMS/2.14-GCCcore-12.2.0/easybuild/LittleCMS-2.14-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELLLVM"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/LLVM/15.0.5-GCCcore-12.2.0/easybuild/LLVM-15.0.5-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELLZ4"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/lz4/1.9.4-GCCcore-12.2.0/easybuild/lz4-1.9.4-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELMESA"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Mesa/22.2.4-GCCcore-12.2.0/easybuild/Mesa-22.2.4-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELMPFR"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/MPFR/4.2.0-GCCcore-12.2.0/easybuild/MPFR-4.2.0-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELNASM"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/NASM/2.15.05-GCCcore-12.2.0/easybuild/NASM-2.15.05-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELNCURSES"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/ncurses/6.3-GCCcore-12.2.0/easybuild/ncurses-6.3-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELNETCDF"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/netCDF/4.9.0-gompi-2022b/easybuild/netCDF-4.9.0-gompi-2022b-easybuild-devel"; | |
| os.environ["EBDEVELNLOHMANN_JSON"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/nlohmann_json/3.11.2-GCCcore-12.2.0/easybuild/nlohmann_json-3.11.2-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELNLOPT"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/NLopt/2.7.1-GCCcore-12.2.0/easybuild/NLopt-2.7.1-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELNODEJS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/nodejs/18.12.1-GCCcore-12.2.0/easybuild/nodejs-18.12.1-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELNUMACTL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/numactl/2.0.16-GCCcore-12.2.0/easybuild/numactl-2.0.16-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELOPENBLAS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenBLAS/0.3.21-GCC-12.2.0/easybuild/OpenBLAS-0.3.21-GCC-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELOPENEXR"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenEXR/3.1.5-GCCcore-12.2.0/easybuild/OpenEXR-3.1.5-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELOPENJPEG"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenJPEG/2.5.0-GCCcore-12.2.0/easybuild/OpenJPEG-2.5.0-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELOPENMPI"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenMPI/4.1.4-GCC-12.2.0/easybuild/OpenMPI-4.1.4-GCC-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELOPENSSL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenSSL/1.1/easybuild/OpenSSL-1.1-easybuild-devel"; | |
| os.environ["EBDEVELPANGO"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Pango/1.50.12-GCCcore-12.2.0/easybuild/Pango-1.50.12-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELPCRE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/PCRE/8.45-GCCcore-12.2.0/easybuild/PCRE-8.45-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELPCRE2"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/PCRE2/10.40-GCCcore-12.2.0/easybuild/PCRE2-10.40-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELPIXMAN"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/pixman/0.42.2-GCCcore-12.2.0/easybuild/pixman-0.42.2-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELPMIX"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/PMIx/4.2.2-GCCcore-12.2.0/easybuild/PMIx-4.2.2-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELPROJ"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/PROJ/9.1.1-GCCcore-12.2.0/easybuild/PROJ-9.1.1-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELPYBIND11"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/pybind11/2.10.3-GCCcore-12.2.0/easybuild/pybind11-2.10.3-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELPYTHON"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Python/3.10.8-GCCcore-12.2.0/easybuild/Python-3.10.8-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELPYYAML"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/PyYAML/6.0-GCCcore-12.2.0/easybuild/PyYAML-6.0-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELQHULL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Qhull/2020.2-GCCcore-12.2.0/easybuild/Qhull-2020.2-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELR"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/R/4.2.2-foss-2022b/easybuild/R-4.2.2-foss-2022b-easybuild-devel"; | |
| os.environ["EBDEVELRAPIDJSON"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/RapidJSON/1.1.0-GCCcore-12.2.0/easybuild/RapidJSON-1.1.0-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELRE2"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/RE2/2023-03-01-GCCcore-12.2.0/easybuild/RE2-2023-03-01-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELREGTOOLS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/RegTools/1.0.0-foss-2022b/easybuild/RegTools-1.0.0-foss-2022b-easybuild-devel"; | |
| os.environ["EBDEVELRMINBUNDLEMINBIOCONDUCTOR"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/R-bundle-Bioconductor/3.16-foss-2022b-R-4.2.2/easybuild/R-bundle-Bioconductor-3.16-foss-2022b-R-4.2.2-easybuild-devel"; | |
| os.environ["EBDEVELSAMTOOLS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/SAMtools/1.17-GCC-12.2.0/easybuild/SAMtools-1.17-GCC-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELSCALAPACK"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/ScaLAPACK/2.2.0-gompi-2022b-fb/easybuild/ScaLAPACK-2.2.0-gompi-2022b-fb-easybuild-devel"; | |
| os.environ["EBDEVELSCIPYMINBUNDLE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/SciPy-bundle/2023.02-gfbf-2022b/easybuild/SciPy-bundle-2023.02-gfbf-2022b-easybuild-devel"; | |
| os.environ["EBDEVELSNAPPY"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/snappy/1.1.9-GCCcore-12.2.0/easybuild/snappy-1.1.9-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELSQLITE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/SQLite/3.39.4-GCCcore-12.2.0/easybuild/SQLite-3.39.4-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELSZIP"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Szip/2.1.1-GCCcore-12.2.0/easybuild/Szip-2.1.1-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELTCL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Tcl/8.6.12-GCCcore-12.2.0/easybuild/Tcl-8.6.12-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELTK"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Tk/8.6.12-GCCcore-12.2.0/easybuild/Tk-8.6.12-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELUCC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/UCC/1.1.0-GCCcore-12.2.0/easybuild/UCC-1.1.0-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELUCX"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/UCX/1.13.1-GCCcore-12.2.0/easybuild/UCX-1.13.1-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELUDUNITS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/UDUNITS/2.2.28-GCCcore-12.2.0/easybuild/UDUNITS-2.2.28-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELUTF8PROC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/utf8proc/2.8.0-GCCcore-12.2.0/easybuild/utf8proc-2.8.0-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELUTILMINLINUX"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/util-linux/2.38.1-GCCcore-12.2.0/easybuild/util-linux-2.38.1-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELX11"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/X11/20221110-GCCcore-12.2.0/easybuild/X11-20221110-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELXERCESMINCPLUSPLUS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Xerces-C++/3.2.4-GCCcore-12.2.0/easybuild/Xerces-C++-3.2.4-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELXORGMINMACROS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/xorg-macros/1.19.3-GCCcore-12.2.0/easybuild/xorg-macros-1.19.3-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELXZ"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/XZ/5.2.7-GCCcore-12.2.0/easybuild/XZ-5.2.7-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELZLIB"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/zlib/1.2.12-GCCcore-12.2.0/easybuild/zlib-1.2.12-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBDEVELZSTD"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/zstd/1.5.2-GCCcore-12.2.0/easybuild/zstd-1.5.2-GCCcore-12.2.0-easybuild-devel"; | |
| os.environ["EBEXTSLISTPYTHON"] = "wheel-0.38.4,setuptools-63.4.3,pip-22.3.1,blist-1.3.6,pbr-5.11.0,Cython-0.29.32,six-1.16.0,toml-0.10.2,flit_core-3.8.0,tomli-2.0.1,packaging-21.3,setuptools_scm-7.0.5,python-dateutil-2.8.2,decorator-5.1.1,liac-arff-2.5.0,pycryptodome-3.17,ecdsa-0.18.0,ipaddress-1.0.23,asn1crypto-1.5.1,idna-3.4,pycparser-2.21,cffi-1.15.1,semantic_version-2.10.0,typing_extensions-4.4.0,setuptools-rust-1.5.2,cryptography-38.0.3,pyasn1-0.4.8,PyNaCl-1.5.0,bcrypt-4.0.1,paramiko-2.12.0,pyparsing-3.0.9,netifaces-0.11.0,netaddr-0.8.0,mock-4.0.3,pytz-2022.6,bitstring-3.1.9,appdirs-1.4.4,distlib-0.3.6,filelock-3.8.0,zipp-3.10.0,importlib_metadata-5.0.0,backports.entry-points-selectable-1.2.0,pathspec-0.10.1,pluggy-1.0.0,editables-0.3,hatchling-1.11.1,hatch_vcs-0.2.0,platformdirs-2.5.3,scandir-1.10.0,pathlib2-2.3.7.post1,importlib_resources-5.10.0,virtualenv-20.16.6,docopt-0.6.2,joblib-1.2.0,chardet-5.0.0,certifi-2022.9.24,urllib3-1.26.12,charset-normalizer-2.1.1,requests-2.28.1,xlrd-2.0.1,py_expression_eval-0.3.14,tabulate-0.9.0,ujson-5.5.0,atomicwrites-1.4.1,py-1.11.0,more-itertools-9.0.0,attrs-22.1.0,backports.functools_lru_cache-1.6.4,wcwidth-0.2.5,iniconfig-1.1.1,colorama-0.4.6,flit_scm-1.7.0,exceptiongroup-1.0.1,pytest-7.2.0,MarkupSafe-2.1.1,Jinja2-3.1.2,sphinxcontrib-serializinghtml-1.1.5,sphinxcontrib-websupport-1.2.4,Pygments-2.13.0,imagesize-1.4.1,docutils-0.19,snowballstemmer-2.2.0,alabaster-0.7.12,sphinxcontrib-applehelp-1.0.2,sphinxcontrib-devhelp-1.0.2,sphinxcontrib-htmlhelp-2.0.0,sphinxcontrib-jsmath-1.0.1,sphinxcontrib-qthelp-1.0.3,Babel-2.11.0,Sphinx-5.3.0,sphinx-bootstrap-theme-0.8.1,click-8.1.3,psutil-5.9.4,future-0.18.2,sortedcontainers-2.4.0,intervaltree-3.1.0,pytoml-0.1.21,zipfile36-0.1.3,tomli_w-1.0.0,flit-3.8.0,regex-2022.10.31,intreehooks-1.0,pylev-1.4.0,pastel-0.2.1,crashtest-0.3.1,clikit-0.6.2,jeepney-0.8.0,SecretStorage-3.3.3,keyring-23.11.0,jaraco.classes-3.2.3,keyrings.alt-4.2.0,tomlkit-0.11.6,shellingham-1.5.0,requests-toolbelt-0.9.1,pyrsistent-0.19.2,pkginfo-1.8.3,ptyprocess-0.7.0,pexpect-4.8.0,hatch_fancy_pypi_readme-22.8.0,jsonschema-4.17.0,simplejson-3.17.6,webencodings-0.5.1,html5lib-1.1,cleo-1.0.0a5,cachy-0.3.0,msgpack-1.0.4,CacheControl-0.12.11,lockfile-0.12.2,poetry-core-1.3.2,glob2-0.7,dulwich-0.20.50,poetry_plugin_export-1.2.0,poetry-1.2.2,fsspec-2022.11.0,threadpoolctl-3.1.0,simplegeneric-0.8.1,pooch-1.6.0,doit-0.36.0,cloudpickle-2.2.0,pydevtool-0.3.0,rich-13.1.0,rich-click-1.6.0,commonmark-0.9.1,execnet-1.9.0,pytest-xdist-3.1.0"; | |
| os.environ["EBEXTSLISTR"] = 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| |
| os.environ["EBEXTSLISTRMINBUNDLEMINBIOCONDUCTOR"] = "BiocGenerics-0.44.0,Biobase-2.58.0,S4Vectors-0.36.2,IRanges-2.32.0,GenomeInfoDbData-1.2.9,GenomeInfoDb-1.34.9,zlibbioc-1.44.0,XVector-0.38.0,Biostrings-2.66.0,KEGGREST-1.38.0,AnnotationDbi-1.60.2,GenomicRanges-1.50.2,BiocParallel-1.32.5,Rhtslib-2.0.0,Rsamtools-2.14.0,MatrixGenerics-1.10.0,DelayedArray-0.24.0,SummarizedExperiment-1.28.0,GenomicAlignments-1.34.1,ShortRead-1.56.1,graph-1.76.0,affyio-1.68.0,preprocessCore-1.60.2,BiocManager-1.30.20,affy-1.76.0,GO.db-3.16.0,limma-3.54.2,RBGL-1.74.0,org.Hs.eg.db-3.16.0,AnnotationForge-1.40.1,annaffy-1.70.0,gcrma-2.70.0,oligoClasses-1.60.0,edgeR-3.40.2,PFAM.db-3.16.0,perm-1.0-0.2,baySeq-2.31.0,qvalue-2.30.0,impute-1.72.3,shinyFiles-0.9.3,samr-3.0,DEGseq-1.52.0,hgu133plus2.db-3.13.0,illuminaio-0.40.0,BiocIO-1.8.0,restfulr-0.0.15,rtracklayer-1.58.0,filelock-1.0.2,BiocFileCache-2.6.1,biomaRt-2.54.0,GenomicFeatures-1.50.4,bumphunter-1.40.0,multtest-2.54.0,scrime-1.3.5,siggenes-1.72.0,DynDoc-1.76.0,NOISeq-2.42.0,Rgraphviz-2.42.0,RNASeqPower-1.38.0,annotate-1.76.0,GSEABase-1.60.0,genefilter-1.80.3,Category-2.64.0,GOstats-2.64.0,BSgenome-1.66.3,VariantAnnotation-1.44.1,interactiveDisplayBase-1.36.0,BiocVersion-3.16.0,AnnotationHub-3.6.0,AnnotationFilter-1.22.0,ProtGenerics-1.30.0,ensembldb-2.22.0,biovizBase-1.46.0,OrganismDbi-1.40.0,ggbio-1.46.0,geneplotter-1.76.0,DESeq2-1.38.3,ReportingTools-2.38.0,Glimma-2.8.0,affycoretools-1.70.0,TxDb.Hsapiens.UCSC.hg19.knownGene-3.2.2,Homo.sapiens-1.3.1,BSgenome.Hsapiens.UCSC.hg19-1.4.3,AgiMicroRna-2.48.0,geneLenDataBase-1.34.0,goseq-1.50.0,KEGGgraph-1.58.3,GEOquery-2.66.0,rARPACK-0.11-0,mixOmics-6.22.0,Rhdf5lib-1.20.0,rhdf5filters-1.10.0,rhdf5-2.42.0,HDF5Array-1.26.0,sparseMatrixStats-1.10.0,DelayedMatrixStats-1.20.0,minfi-1.44.0,FDb.InfiniumMethylation.hg19-2.2.0,methylumi-2.44.0,lumi-2.50.0,widgetTools-1.76.0,tkWidgets-1.76.0,Mfuzz-2.58.0,venn-1.11,maSigPro-1.70.0,SPIA-2.50.0,Gviz-1.42.1,cummeRbund-2.40.0,GenomicFiles-1.34.0,derfinderHelper-1.32.0,derfinder-1.32.0,polyester-1.34.0,Rsubread-2.12.3,pcaMethods-1.90.0,marray-1.76.0,CGHbase-1.58.0,Wrench-1.16.0,lpsymphony-1.26.3,IHW-1.26.0,metagenomeSeq-1.40.0,gdsfmt-1.34.0,SNPRelate-1.32.2,biomformat-1.26.0,phyloseq-1.42.0,NADA-1.6-1.1,zCompositions-1.4.0-1,RcppZiggurat-0.1.6,Rfast-2.0.7,ALDEx2-1.30.0,dada2-1.26.0,LEA-3.10.2,tximport-1.26.1,SingleCellExperiment-1.20.0,beachmat-2.14.0,RcppAnnoy-0.0.20,RcppHNSW-0.4.1,BiocNeighbors-1.16.0,rsvd-1.0.5,ScaledMatrix-1.6.0,BiocSingular-1.14.0,scuttle-1.8.4,RcppML-0.3.7,sitmo-2.0.2,dqrng-0.3.0,uwot-0.1.14,ggrastr-1.0.1,scater-1.26.1,bluster-1.8.0,metapod-1.6.0,scran-1.26.2,SC3-1.26.2,ComplexHeatmap-2.14.0,GENIE3-1.20.0,dupRadar-1.28.0,DNAcopy-1.72.3,sva-3.46.0,ballgown-2.30.0,DropletUtils-1.18.1,DeconRNASeq-1.40.0,GSVA-1.46.0,PureCN-2.4.0,globaltest-5.52.0,GlobalAncova-4.16.0,vsn-3.66.0,mzID-1.36.0,mzR-2.32.0,MsCoreUtils-1.10.0,MSnbase-2.24.2,MassSpecWavelet-1.64.1,MsFeatures-1.6.0,xcms-3.20.0,CAMERA-1.54.0,fgsea-1.24.0,GWASExactHW-1.01,quantsmooth-1.64.0,GWASTools-1.44.0,SeqArray-1.38.0,SeqVarTools-1.36.0,GENESIS-2.28.0,MLInterfaces-1.78.0,pRoloc-1.38.2,pRolocdata-1.36.0,fresh-0.2.0,waiter-0.2.5,shinydashboardPlus-2.0.3,shinyhelper-0.3.2,anytime-0.3.9,shinyWidgets-0.7.6,pRolocGUI-2.8.0,EBImage-4.40.0,GenomicScores-2.10.0,BSgenome.Mmusculus.UCSC.mm10-1.4.3,TxDb.Mmusculus.UCSC.mm10.knownGene-3.10.0,regioneR-1.30.0,InteractionSet-1.26.1,ChIPpeakAnno-3.32.0,seqLogo-1.64.0,rGADEM-2.46.0,MotifDb-1.40.0,poweRlaw-0.70.6,CNEr-1.34.0,DirichletMultinomial-1.40.0,TFMPvalue-0.0.9,TFBSTools-1.36.0,motifStack-1.42.0,ATACseqQC-1.22.0,ResidualMatrix-1.8.0,batchelor-1.14.1,gsmoothr-0.1.7,Ringo-1.62.0,R.devices-2.17.1,R.filesets-2.15.0,aroma.light-3.28.0,PSCBS-0.66.0,aroma.core-3.3.0,R.huge-0.9.0,aroma.apd-0.6.1,aroma.affymetrix-3.2.1,Repitools-1.44.0,BSgenome.Hsapiens.UCSC.hg38-1.4.5,MEDIPS-1.50.0,RProtoBufLib-2.10.0,cytolib-2.10.1,flowCore-2.10.0,mutoss-0.1-13,qqconf-1.3.1,metap-1.8,scattermore-0.8,SeuratObject-4.1.3,Seurat-4.3.0,ALL-1.40.0,ConsensusClusterPlus-1.62.0,flowViz-1.62.0,ncdfFlow-2.44.0,aws.signature-0.6.0,aws.s3-0.3.21,flowWorkspace-4.10.1,ash-1.0-15,hdrcde-3.4,rainbow-3.7,fds-1.8,fda-6.0.5,flowStats-4.10.0,flowClust-3.36.0,openCyto-2.10.1,ggcyto-1.26.4,CytoML-2.10.0,colorRamps-2.3.1,ggnewscale-0.4.8,ggpointdensity-0.1.0,FlowSOM-2.6.0,HMMcopy-1.40.0,diffcyt-1.18.0,blme-1.0-5,remaCor-0.0.11,variancePartition-1.28.7,muscat-1.12.1,IlluminaHumanMethylation450kmanifest-0.4.0,IlluminaHumanMethylationEPICmanifest-0.3.0,IlluminaHumanMethylation450kanno.ilmn12.hg19-0.6.1,IlluminaHumanMethylationEPICanno.ilm10b2.hg19-0.6.0,IlluminaHumanMethylationEPICanno.ilm10b4.hg19-0.6.0,conumee-1.32.0,BSgenome.Cfamiliaris.UCSC.canFam3-1.4.0,ExperimentHub-2.6.0,SingleR-2.0.0,FlowSorted.Blood.EPIC-2.2.0,FlowSorted.CordBloodCombined.450k-1.14.0,DRIMSeq-1.26.0,stageR-1.20.0,isva-1.9,org.Mm.eg.db-3.16.0,org.Rn.eg.db-3.16.0,ROC-1.74.0,wateRmelon-2.4.0,GLAD-2.62.0,missMethyl-1.32.0,MethylSeekR-1.38.0,affxparser-1.70.0,ccdata-1.24.0,lsa-0.73.3,ccmap-1.24.0,oligo-1.62.2,SMVar-1.3.4,metaMA-3.1.3,randomcoloR-1.1.0.1,shinyBS-0.61.1,shinypanel-0.1.5,crossmeta-1.24.0,snpStats-1.48.0,mixsqp-0.3-48,susieR-0.12.35,coloc-5.1.0.1,SCANVIS-1.12.0,EnsDb.Hsapiens.v86-2.99.0,agricolae-1.3-5,bookdown-0.33,BiocStyle-2.26.0,estimability-1.4.1,emmeans-1.8.5,ggdendro-0.1.23,pmp-1.10.0,MultiDataSet-1.26.0,BiocBaseUtils-1.0.0,MultiAssayExperiment-1.24.0,ropls-1.30.0,ontologyIndex-2.10,rols-2.26.0,struct-1.10.0,ggthemes-4.2.4,structToolbox-1.10.1,EnsDb.Hsapiens.v75-2.99.0,ggseqlogo-0.1,sparsesvd-0.2-2,docopt-0.7.1,qlcMatrix-0.9.7,Signac-1.9.0,motifmatchr-1.20.0,extraDistr-1.9.1,PRROC-1.3.1,TSP-1.2-3,qap-0.1-2,ca-0.71.1,seriation-1.4.2,egg-0.4.5,heatmaply-1.4.2,OUTRIDER-1.16.3,FRASER-1.10.2,JASPAR2020-0.99.10,AUCell-1.20.2,RcisTarget-1.18.2,NMF-0.25,densEstBayes-1.0-2.1,reldist-1.7-2,M3Drop-1.24.0,bsseq-1.34.0,DSS-2.46.0,pathview-1.38.0,chromVAR-1.20.2,EnsDb.Hsapiens.v79-2.99.0,WGCNA-1.72-1,DNABarcodes-1.28.0,CAGEr-2.4.0,SPOTlight-1.2.0,CGHcall-2.60.0,QDNAseq-1.34.0,HiCcompare-1.20.0,ROntoTools-2.26.0,scDblFinder-1.12.0,treeio-1.22.0,ggtree-3.6.2,scistreer-1.1.0,numbat-1.2.2,HiCBricks-1.16.0,dir.expiry-1.6.0,basilisk.utils-1.10.0,basilisk-1.10.2,zellkonverter-1.8.0,DO.db-2.9,GOSemSim-2.24.0,HDO.db-0.99.1,DOSE-3.24.2,enrichplot-1.18.3,gson-0.1.0,clusterProfiler-4.6.2,reactome.db-1.82.0,graphite-1.44.0,ReactomePA-1.42.0,flowClean-1.36.0,flowAI-1.28.0,flowFP-1.56.3,simplifyEnrichment-1.8.0,RPMG-2.2-3,Rwave-2.6-5,RSEIS-4.1-4,splancs-2.01-43,MBA-0.1-0,GEOmap-2.5-0,RFOC-3.4-6,flowDensity-1.32.0,flowPeaks-1.44.0,SamSPECTRAL-1.52.0,ddPCRclust-1.18.0,feature-1.2.15,flowMerge-2.46.0,SpatialExperiment-1.8.1,TrajectoryUtils-1.6.0,slingshot-2.6.0,TreeSummarizedExperiment-2.6.0,decontam-1.18.0,DECIPHER-2.26.0,mia-1.6.0,ANCOMBC-2.0.2,decoupleR-2.4.0,UCell-2.2.0,intervals-0.15.4,oompaBase-3.2.9,oompaData-3.1.3,TailRank-3.2.2"; | |
| os.environ["EBEXTSLISTSCIPYMINBUNDLE"] = "numpy-1.24.2,ply-3.11,gast-0.5.3,beniget-0.4.1,pythran-0.12.1,scipy-1.10.1,numexpr-2.8.4,Bottleneck-1.3.5,pandas-1.5.3,mpmath-1.2.1,deap-1.3.3"; | |
| os.environ["EBROOTARMADILLO"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Armadillo/11.4.3-foss-2022b"; | |
| os.environ["EBROOTARPACKMINNG"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/arpack-ng/3.8.0-foss-2022b"; | |
| os.environ["EBROOTARROW"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Arrow/11.0.0-gfbf-2022b"; | |
| os.environ["EBROOTARROWMINR"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/arrow-R/11.0.0.3-foss-2022b-R-4.2.2"; | |
| os.environ["EBROOTATK"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/ATK/2.38.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTATMINSPI2MINATK"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/at-spi2-atk/2.38.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTATMINSPI2MINCORE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/at-spi2-core/2.46.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTBINUTILS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/binutils/2.39-GCCcore-12.2.0"; | |
| os.environ["EBROOTBOOST"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Boost/1.81.0-GCC-12.2.0"; | |
| os.environ["EBROOTBROTLI"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Brotli/1.0.9-GCCcore-12.2.0"; | |
| os.environ["EBROOTBRUNSLI"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Brunsli/0.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTBZIP2"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/bzip2/1.0.8-GCCcore-12.2.0"; | |
| os.environ["EBROOTCAIRO"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/cairo/1.17.4-GCCcore-12.2.0"; | |
| os.environ["EBROOTCFITSIO"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/CFITSIO/4.2.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTCURL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/cURL/7.86.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTDBUS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/DBus/1.15.2-GCCcore-12.2.0"; | |
| os.environ["EBROOTEXPAT"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/expat/2.4.9-GCCcore-12.2.0"; | |
| os.environ["EBROOTFFTW"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/FFTW/3.3.10-GCC-12.2.0"; | |
| os.environ["EBROOTFFTWMPI"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/FFTW.MPI/3.3.10-gompi-2022b"; | |
| os.environ["EBROOTFLAC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/FLAC/1.4.2-GCCcore-12.2.0"; | |
| os.environ["EBROOTFLEXIBLAS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/FlexiBLAS/3.2.1-GCC-12.2.0"; | |
| os.environ["EBROOTFONTCONFIG"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/fontconfig/2.14.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTFOSS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/foss/2022b"; | |
| os.environ["EBROOTFREETYPE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/freetype/2.12.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTFRIBIDI"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/FriBidi/1.0.12-GCCcore-12.2.0"; | |
| os.environ["EBROOTGCC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/GCCcore/12.2.0"; | |
| os.environ["EBROOTGCCCORE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/GCCcore/12.2.0"; | |
| os.environ["EBROOTGDAL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/GDAL/3.6.2-foss-2022b"; | |
| os.environ["EBROOTGDKMINPIXBUF"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Gdk-Pixbuf/2.42.10-GCCcore-12.2.0"; | |
| os.environ["EBROOTGEOS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/GEOS/3.11.1-GCC-12.2.0"; | |
| os.environ["EBROOTGETTEXT"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/gettext/0.21.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTGFBF"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/gfbf/2022b"; | |
| os.environ["EBROOTGHOSTSCRIPT"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Ghostscript/10.0.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTGIFLIB"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/giflib/5.2.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTGLIB"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/GLib/2.75.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTGLPK"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/GLPK/5.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTGMP"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/GMP/6.2.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTGOMPI"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/gompi/2022b"; | |
| os.environ["EBROOTGSL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/GSL/2.7-GCC-12.2.0"; | |
| os.environ["EBROOTGTK3"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/GTK3/3.24.35-GCCcore-12.2.0"; | |
| os.environ["EBROOTGZIP"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/gzip/1.12-GCCcore-12.2.0"; | |
| os.environ["EBROOTHARFBUZZ"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/HarfBuzz/5.3.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTHDF"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/HDF/4.2.15-GCCcore-12.2.0"; | |
| os.environ["EBROOTHDF5"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/HDF5/1.14.0-gompi-2022b"; | |
| os.environ["EBROOTHIGHWAY"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Highway/1.0.3-GCCcore-12.2.0"; | |
| os.environ["EBROOTHWLOC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/hwloc/2.8.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTICU"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/ICU/72.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTIMAGEMAGICK"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/ImageMagick/7.1.0-53-GCCcore-12.2.0"; | |
| os.environ["EBROOTIMATH"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Imath/3.1.6-GCCcore-12.2.0"; | |
| os.environ["EBROOTJASPER"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/JasPer/4.0.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTJAVA"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Java/11.0.20"; | |
| os.environ["EBROOTJBIGKIT"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/jbigkit/2.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTJSONMINC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/json-c/0.16-GCCcore-12.2.0"; | |
| os.environ["EBROOTLAME"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/LAME/3.100-GCCcore-12.2.0"; | |
| os.environ["EBROOTLEAFCUTTER"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/leafcutter/0.2.9-foss-2022b-R-4.2.2"; | |
| os.environ["EBROOTLERC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/LERC/4.0.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBDEFLATE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libdeflate/1.15-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBDRM"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libdrm/2.4.114-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBEPOXY"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libepoxy/1.5.10-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBEVENT"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libevent/2.1.12-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBFABRIC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libfabric/1.16.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBFFI"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libffi/3.4.4-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBGEOTIFF"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libgeotiff/1.7.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBGIT2"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libgit2/1.5.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBGLU"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libGLU/9.0.2-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBGLVND"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libglvnd/1.6.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBJPEGMINTURBO"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBOGG"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libogg/1.3.5-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBOPUS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libopus/1.3.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBPCIACCESS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libpciaccess/0.17-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBPNG"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libpng/1.6.38-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBREADLINE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libreadline/8.2-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBSNDFILE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libsndfile/1.2.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBTIFF"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/LibTIFF/4.4.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBTIRPC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libtirpc/1.3.3-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBUNWIND"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libunwind/1.6.2-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBVORBIS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libvorbis/1.3.7-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBXML2"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libxml2/2.10.3-GCCcore-12.2.0"; | |
| os.environ["EBROOTLIBYAML"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/libyaml/0.2.5-GCCcore-12.2.0"; | |
| os.environ["EBROOTLITTLECMS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/LittleCMS/2.14-GCCcore-12.2.0"; | |
| os.environ["EBROOTLLVM"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/LLVM/15.0.5-GCCcore-12.2.0"; | |
| os.environ["EBROOTLZ4"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/lz4/1.9.4-GCCcore-12.2.0"; | |
| os.environ["EBROOTMESA"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Mesa/22.2.4-GCCcore-12.2.0"; | |
| os.environ["EBROOTMPFR"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/MPFR/4.2.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTNASM"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/NASM/2.15.05-GCCcore-12.2.0"; | |
| os.environ["EBROOTNCURSES"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/ncurses/6.3-GCCcore-12.2.0"; | |
| os.environ["EBROOTNETCDF"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/netCDF/4.9.0-gompi-2022b"; | |
| os.environ["EBROOTNLOHMANN_JSON"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/nlohmann_json/3.11.2-GCCcore-12.2.0"; | |
| os.environ["EBROOTNLOPT"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/NLopt/2.7.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTNODEJS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/nodejs/18.12.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTNUMACTL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/numactl/2.0.16-GCCcore-12.2.0"; | |
| os.environ["EBROOTOPENBLAS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenBLAS/0.3.21-GCC-12.2.0"; | |
| os.environ["EBROOTOPENEXR"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenEXR/3.1.5-GCCcore-12.2.0"; | |
| os.environ["EBROOTOPENJPEG"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenJPEG/2.5.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTOPENMPI"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenMPI/4.1.4-GCC-12.2.0"; | |
| os.environ["EBROOTOPENSSL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenSSL/1.1"; | |
| os.environ["EBROOTPANGO"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Pango/1.50.12-GCCcore-12.2.0"; | |
| os.environ["EBROOTPCRE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/PCRE/8.45-GCCcore-12.2.0"; | |
| os.environ["EBROOTPCRE2"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/PCRE2/10.40-GCCcore-12.2.0"; | |
| os.environ["EBROOTPIXMAN"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/pixman/0.42.2-GCCcore-12.2.0"; | |
| os.environ["EBROOTPMIX"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/PMIx/4.2.2-GCCcore-12.2.0"; | |
| os.environ["EBROOTPROJ"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/PROJ/9.1.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTPYBIND11"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/pybind11/2.10.3-GCCcore-12.2.0"; | |
| os.environ["EBROOTPYTHON"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Python/3.10.8-GCCcore-12.2.0"; | |
| os.environ["EBROOTPYYAML"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/PyYAML/6.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTQHULL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Qhull/2020.2-GCCcore-12.2.0"; | |
| os.environ["EBROOTR"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/R/4.2.2-foss-2022b"; | |
| os.environ["EBROOTRAPIDJSON"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/RapidJSON/1.1.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTRE2"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/RE2/2023-03-01-GCCcore-12.2.0"; | |
| os.environ["EBROOTREGTOOLS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/RegTools/1.0.0-foss-2022b"; | |
| os.environ["EBROOTRMINBUNDLEMINBIOCONDUCTOR"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/R-bundle-Bioconductor/3.16-foss-2022b-R-4.2.2"; | |
| os.environ["EBROOTSAMTOOLS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/SAMtools/1.17-GCC-12.2.0"; | |
| os.environ["EBROOTSCALAPACK"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/ScaLAPACK/2.2.0-gompi-2022b-fb"; | |
| os.environ["EBROOTSCIPYMINBUNDLE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/SciPy-bundle/2023.02-gfbf-2022b"; | |
| os.environ["EBROOTSNAPPY"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/snappy/1.1.9-GCCcore-12.2.0"; | |
| os.environ["EBROOTSQLITE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/SQLite/3.39.4-GCCcore-12.2.0"; | |
| os.environ["EBROOTSZIP"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Szip/2.1.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTTCL"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Tcl/8.6.12-GCCcore-12.2.0"; | |
| os.environ["EBROOTTK"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Tk/8.6.12-GCCcore-12.2.0"; | |
| os.environ["EBROOTUCC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/UCC/1.1.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTUCX"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/UCX/1.13.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTUDUNITS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/UDUNITS/2.2.28-GCCcore-12.2.0"; | |
| os.environ["EBROOTUTF8PROC"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/utf8proc/2.8.0-GCCcore-12.2.0"; | |
| os.environ["EBROOTUTILMINLINUX"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/util-linux/2.38.1-GCCcore-12.2.0"; | |
| os.environ["EBROOTX11"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/X11/20221110-GCCcore-12.2.0"; | |
| os.environ["EBROOTXERCESMINCPLUSPLUS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Xerces-C++/3.2.4-GCCcore-12.2.0"; | |
| os.environ["EBROOTXORGMINMACROS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/xorg-macros/1.19.3-GCCcore-12.2.0"; | |
| os.environ["EBROOTXZ"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/XZ/5.2.7-GCCcore-12.2.0"; | |
| os.environ["EBROOTZLIB"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/zlib/1.2.12-GCCcore-12.2.0"; | |
| os.environ["EBROOTZSTD"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/zstd/1.5.2-GCCcore-12.2.0"; | |
| os.environ["EBVERSIONARMADILLO"] = "11.4.3"; | |
| os.environ["EBVERSIONARPACKMINNG"] = "3.8.0"; | |
| os.environ["EBVERSIONARROW"] = "11.0.0"; | |
| os.environ["EBVERSIONARROWMINR"] = "11.0.0.3"; | |
| os.environ["EBVERSIONATK"] = "2.38.0"; | |
| os.environ["EBVERSIONATMINSPI2MINATK"] = "2.38.0"; | |
| os.environ["EBVERSIONATMINSPI2MINCORE"] = "2.46.0"; | |
| os.environ["EBVERSIONBINUTILS"] = "2.39"; | |
| os.environ["EBVERSIONBOOST"] = "1.81.0"; | |
| os.environ["EBVERSIONBROTLI"] = "1.0.9"; | |
| os.environ["EBVERSIONBRUNSLI"] = "0.1"; | |
| os.environ["EBVERSIONBZIP2"] = "1.0.8"; | |
| os.environ["EBVERSIONCAIRO"] = "1.17.4"; | |
| os.environ["EBVERSIONCFITSIO"] = "4.2.0"; | |
| os.environ["EBVERSIONCURL"] = "7.86.0"; | |
| os.environ["EBVERSIONDBUS"] = "1.15.2"; | |
| os.environ["EBVERSIONEXPAT"] = "2.4.9"; | |
| os.environ["EBVERSIONFFTW"] = "3.3.10"; | |
| os.environ["EBVERSIONFFTWMPI"] = "3.3.10"; | |
| os.environ["EBVERSIONFLAC"] = "1.4.2"; | |
| os.environ["EBVERSIONFLEXIBLAS"] = "3.2.1"; | |
| os.environ["EBVERSIONFONTCONFIG"] = "2.14.1"; | |
| os.environ["EBVERSIONFOSS"] = "2022b"; | |
| os.environ["EBVERSIONFREETYPE"] = "2.12.1"; | |
| os.environ["EBVERSIONFRIBIDI"] = "1.0.12"; | |
| os.environ["EBVERSIONGCC"] = "12.2.0"; | |
| os.environ["EBVERSIONGCCCORE"] = "12.2.0"; | |
| os.environ["EBVERSIONGDAL"] = "3.6.2"; | |
| os.environ["EBVERSIONGDKMINPIXBUF"] = "2.42.10"; | |
| os.environ["EBVERSIONGEOS"] = "3.11.1"; | |
| os.environ["EBVERSIONGETTEXT"] = "0.21.1"; | |
| os.environ["EBVERSIONGFBF"] = "2022b"; | |
| os.environ["EBVERSIONGHOSTSCRIPT"] = "10.0.0"; | |
| os.environ["EBVERSIONGIFLIB"] = "5.2.1"; | |
| os.environ["EBVERSIONGLIB"] = "2.75.0"; | |
| os.environ["EBVERSIONGLPK"] = "5.0"; | |
| os.environ["EBVERSIONGMP"] = "6.2.1"; | |
| os.environ["EBVERSIONGOMPI"] = "2022b"; | |
| os.environ["EBVERSIONGSL"] = "2.7"; | |
| os.environ["EBVERSIONGTK3"] = "3.24.35"; | |
| os.environ["EBVERSIONGZIP"] = "1.12"; | |
| os.environ["EBVERSIONHARFBUZZ"] = "5.3.1"; | |
| os.environ["EBVERSIONHDF"] = "4.2.15"; | |
| os.environ["EBVERSIONHDF5"] = "1.14.0"; | |
| os.environ["EBVERSIONHIGHWAY"] = "1.0.3"; | |
| os.environ["EBVERSIONHWLOC"] = "2.8.0"; | |
| os.environ["EBVERSIONICU"] = "72.1"; | |
| os.environ["EBVERSIONIMAGEMAGICK"] = "7.1.0-53"; | |
| os.environ["EBVERSIONIMATH"] = "3.1.6"; | |
| os.environ["EBVERSIONJASPER"] = "4.0.0"; | |
| os.environ["EBVERSIONJAVA"] = "11.0.20"; | |
| os.environ["EBVERSIONJBIGKIT"] = "2.1"; | |
| os.environ["EBVERSIONJSONMINC"] = "0.16"; | |
| os.environ["EBVERSIONLAME"] = "3.100"; | |
| os.environ["EBVERSIONLEAFCUTTER"] = "0.2.9"; | |
| os.environ["EBVERSIONLERC"] = "4.0.0"; | |
| os.environ["EBVERSIONLIBDEFLATE"] = "1.15"; | |
| os.environ["EBVERSIONLIBDRM"] = "2.4.114"; | |
| os.environ["EBVERSIONLIBEPOXY"] = "1.5.10"; | |
| os.environ["EBVERSIONLIBEVENT"] = "2.1.12"; | |
| os.environ["EBVERSIONLIBFABRIC"] = "1.16.1"; | |
| os.environ["EBVERSIONLIBFFI"] = "3.4.4"; | |
| os.environ["EBVERSIONLIBGEOTIFF"] = "1.7.1"; | |
| os.environ["EBVERSIONLIBGIT2"] = "1.5.0"; | |
| os.environ["EBVERSIONLIBGLU"] = "9.0.2"; | |
| os.environ["EBVERSIONLIBGLVND"] = "1.6.0"; | |
| os.environ["EBVERSIONLIBJPEGMINTURBO"] = "2.1.4"; | |
| os.environ["EBVERSIONLIBOGG"] = "1.3.5"; | |
| os.environ["EBVERSIONLIBOPUS"] = "1.3.1"; | |
| os.environ["EBVERSIONLIBPCIACCESS"] = "0.17"; | |
| os.environ["EBVERSIONLIBPNG"] = "1.6.38"; | |
| os.environ["EBVERSIONLIBREADLINE"] = "8.2"; | |
| os.environ["EBVERSIONLIBSNDFILE"] = "1.2.0"; | |
| os.environ["EBVERSIONLIBTIFF"] = "4.4.0"; | |
| os.environ["EBVERSIONLIBTIRPC"] = "1.3.3"; | |
| os.environ["EBVERSIONLIBUNWIND"] = "1.6.2"; | |
| os.environ["EBVERSIONLIBVORBIS"] = "1.3.7"; | |
| os.environ["EBVERSIONLIBXML2"] = "2.10.3"; | |
| os.environ["EBVERSIONLIBYAML"] = "0.2.5"; | |
| os.environ["EBVERSIONLITTLECMS"] = "2.14"; | |
| os.environ["EBVERSIONLLVM"] = "15.0.5"; | |
| os.environ["EBVERSIONLZ4"] = "1.9.4"; | |
| os.environ["EBVERSIONMESA"] = "22.2.4"; | |
| os.environ["EBVERSIONMPFR"] = "4.2.0"; | |
| os.environ["EBVERSIONNASM"] = "2.15.05"; | |
| os.environ["EBVERSIONNCURSES"] = "6.3"; | |
| os.environ["EBVERSIONNETCDF"] = "4.9.0"; | |
| os.environ["EBVERSIONNLOHMANN_JSON"] = "3.11.2"; | |
| os.environ["EBVERSIONNLOPT"] = "2.7.1"; | |
| os.environ["EBVERSIONNODEJS"] = "18.12.1"; | |
| os.environ["EBVERSIONNUMACTL"] = "2.0.16"; | |
| os.environ["EBVERSIONOPENBLAS"] = "0.3.21"; | |
| os.environ["EBVERSIONOPENEXR"] = "3.1.5"; | |
| os.environ["EBVERSIONOPENJPEG"] = "2.5.0"; | |
| os.environ["EBVERSIONOPENMPI"] = "4.1.4"; | |
| os.environ["EBVERSIONOPENSSL"] = "1.1"; | |
| os.environ["EBVERSIONPANGO"] = "1.50.12"; | |
| os.environ["EBVERSIONPCRE"] = "8.45"; | |
| os.environ["EBVERSIONPCRE2"] = "10.40"; | |
| os.environ["EBVERSIONPIXMAN"] = "0.42.2"; | |
| os.environ["EBVERSIONPMIX"] = "4.2.2"; | |
| os.environ["EBVERSIONPROJ"] = "9.1.1"; | |
| os.environ["EBVERSIONPYBIND11"] = "2.10.3"; | |
| os.environ["EBVERSIONPYTHON"] = "3.10.8"; | |
| os.environ["EBVERSIONPYYAML"] = "6.0"; | |
| os.environ["EBVERSIONQHULL"] = "2020.2"; | |
| os.environ["EBVERSIONR"] = "4.2.2"; | |
| os.environ["EBVERSIONRAPIDJSON"] = "1.1.0"; | |
| os.environ["EBVERSIONRE2"] = "2023-03-01"; | |
| os.environ["EBVERSIONREGTOOLS"] = "1.0.0"; | |
| os.environ["EBVERSIONRMINBUNDLEMINBIOCONDUCTOR"] = "3.16"; | |
| os.environ["EBVERSIONSAMTOOLS"] = "1.17"; | |
| os.environ["EBVERSIONSCALAPACK"] = "2.2.0"; | |
| os.environ["EBVERSIONSCIPYMINBUNDLE"] = "2023.02"; | |
| os.environ["EBVERSIONSNAPPY"] = "1.1.9"; | |
| os.environ["EBVERSIONSQLITE"] = "3.39.4"; | |
| os.environ["EBVERSIONSZIP"] = "2.1.1"; | |
| os.environ["EBVERSIONTCL"] = "8.6.12"; | |
| os.environ["EBVERSIONTK"] = "8.6.12"; | |
| os.environ["EBVERSIONUCC"] = "1.1.0"; | |
| os.environ["EBVERSIONUCX"] = "1.13.1"; | |
| os.environ["EBVERSIONUDUNITS"] = "2.2.28"; | |
| os.environ["EBVERSIONUTF8PROC"] = "2.8.0"; | |
| os.environ["EBVERSIONUTILMINLINUX"] = "2.38.1"; | |
| os.environ["EBVERSIONX11"] = "20221110"; | |
| os.environ["EBVERSIONXERCESMINCPLUSPLUS"] = "3.2.4"; | |
| os.environ["EBVERSIONXORGMINMACROS"] = "1.19.3"; | |
| os.environ["EBVERSIONXZ"] = "5.2.7"; | |
| os.environ["EBVERSIONZLIB"] = "1.2.12"; | |
| os.environ["EBVERSIONZSTD"] = "1.5.2"; | |
| os.environ["GI_TYPELIB_PATH"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/GTK3/3.24.35-GCCcore-12.2.0/lib/girepository-1.0:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Pango/1.50.12-GCCcore-12.2.0/lib/girepository-1.0:/project/def-maintainers/boegelbot/Rocky8/zen2/software/HarfBuzz/5.3.1-GCCcore-12.2.0/lib/girepository-1.0:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Gdk-Pixbuf/2.42.10-GCCcore-12.2.0/lib/girepository-1.0:/project/def-maintainers/boegelbot/Rocky8/zen2/software/at-spi2-core/2.46.0-GCCcore-12.2.0/lib/girepository-1.0:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ATK/2.38.0-GCCcore-12.2.0/lib/girepository-1.0"; | |
| os.environ["HDF5_DIR"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/HDF5/1.14.0-gompi-2022b"; | |
| os.environ["JAVA_HOME"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Java/11.0.20"; | |
| os.environ["LD_LIBRARY_PATH"] = 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| |
| os.environ["LIBRARY_PATH"] = 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| |
| os.environ["LOADEDMODULES"] = "GCCcore/12.2.0:zlib/1.2.12-GCCcore-12.2.0:binutils/2.39-GCCcore-12.2.0:GCC/12.2.0:numactl/2.0.16-GCCcore-12.2.0:XZ/5.2.7-GCCcore-12.2.0:libxml2/2.10.3-GCCcore-12.2.0:libpciaccess/0.17-GCCcore-12.2.0:hwloc/2.8.0-GCCcore-12.2.0:OpenSSL/1.1:libevent/2.1.12-GCCcore-12.2.0:UCX/1.13.1-GCCcore-12.2.0:libfabric/1.16.1-GCCcore-12.2.0:PMIx/4.2.2-GCCcore-12.2.0:UCC/1.1.0-GCCcore-12.2.0:OpenMPI/4.1.4-GCC-12.2.0:OpenBLAS/0.3.21-GCC-12.2.0:FlexiBLAS/3.2.1-GCC-12.2.0:FFTW/3.3.10-GCC-12.2.0:gompi/2022b:FFTW.MPI/3.3.10-gompi-2022b:ScaLAPACK/2.2.0-gompi-2022b-fb:foss/2022b:ncurses/6.3-GCCcore-12.2.0:bzip2/1.0.8-GCCcore-12.2.0:cURL/7.86.0-GCCcore-12.2.0:SAMtools/1.17-GCC-12.2.0:libreadline/8.2-GCCcore-12.2.0:Tcl/8.6.12-GCCcore-12.2.0:SQLite/3.39.4-GCCcore-12.2.0:GMP/6.2.1-GCCcore-12.2.0:libffi/3.4.4-GCCcore-12.2.0:Python/3.10.8-GCCcore-12.2.0:libyaml/0.2.5-GCCcore-12.2.0:PyYAML/6.0-GCCcore-12.2.0:expat/2.4.9-GCCcore-12.2.0:libpng/1.6.38-GCCcore-12.2.0:Brotli/1.0.9-GCCcore-12.2.0:freetype/2.12.1-GCCcore-12.2.0:util-linux/2.38.1-GCCcore-12.2.0:fontconfig/2.14.1-GCCcore-12.2.0:xorg-macros/1.19.3-GCCcore-12.2.0:X11/20221110-GCCcore-12.2.0:gzip/1.12-GCCcore-12.2.0:lz4/1.9.4-GCCcore-12.2.0:zstd/1.5.2-GCCcore-12.2.0:libdrm/2.4.114-GCCcore-12.2.0:libglvnd/1.6.0-GCCcore-12.2.0:libunwind/1.6.2-GCCcore-12.2.0:LLVM/15.0.5-GCCcore-12.2.0:Mesa/22.2.4-GCCcore-12.2.0:libGLU/9.0.2-GCCcore-12.2.0:pixman/0.42.2-GCCcore-12.2.0:gettext/0.21.1-GCCcore-12.2.0:PCRE2/10.40-GCCcore-12.2.0:GLib/2.75.0-GCCcore-12.2.0:cairo/1.17.4-GCCcore-12.2.0:NASM/2.15.05-GCCcore-12.2.0:libjpeg-turbo/2.1.4-GCCcore-12.2.0:jbigkit/2.1-GCCcore-12.2.0:libdeflate/1.15-GCCcore-12.2.0:LibTIFF/4.4.0-GCCcore-12.2.0:Java/11.0.20:Tk/8.6.12-GCCcore-12.2.0:NLopt/2.7.1-GCCcore-12.2.0:libogg/1.3.5-GCCcore-12.2.0:FLAC/1.4.2-GCCcore-12.2.0:libvorbis/1.3.7-GCCcore-12.2.0:libopus/1.3.1-GCCcore-12.2.0:LAME/3.100-GCCcore-12.2.0:libsndfile/1.2.0-GCCcore-12.2.0:ICU/72.1-GCCcore-12.2.0:Szip/2.1.1-GCCcore-12.2.0:HDF5/1.14.0-gompi-2022b:UDUNITS/2.2.28-GCCcore-12.2.0:GSL/2.7-GCC-12.2.0:ATK/2.38.0-GCCcore-12.2.0:DBus/1.15.2-GCCcore-12.2.0:at-spi2-core/2.46.0-GCCcore-12.2.0:at-spi2-atk/2.38.0-GCCcore-12.2.0:Gdk-Pixbuf/2.42.10-GCCcore-12.2.0:HarfBuzz/5.3.1-GCCcore-12.2.0:FriBidi/1.0.12-GCCcore-12.2.0:Pango/1.50.12-GCCcore-12.2.0:libepoxy/1.5.10-GCCcore-12.2.0:GTK3/3.24.35-GCCcore-12.2.0:Ghostscript/10.0.0-GCCcore-12.2.0:JasPer/4.0.0-GCCcore-12.2.0:LittleCMS/2.14-GCCcore-12.2.0:ImageMagick/7.1.0-53-GCCcore-12.2.0:GLPK/5.0-GCCcore-12.2.0:nodejs/18.12.1-GCCcore-12.2.0:netCDF/4.9.0-gompi-2022b:GEOS/3.11.1-GCC-12.2.0:PCRE/8.45-GCCcore-12.2.0:nlohmann_json/3.11.2-GCCcore-12.2.0:PROJ/9.1.1-GCCcore-12.2.0:libgeotiff/1.7.1-GCCcore-12.2.0:gfbf/2022b:pybind11/2.10.3-GCCcore-12.2.0:SciPy-bundle/2023.02-gfbf-2022b:libtirpc/1.3.3-GCCcore-12.2.0:HDF/4.2.15-GCCcore-12.2.0:Boost/1.81.0-GCC-12.2.0:arpack-ng/3.8.0-foss-2022b:Armadillo/11.4.3-foss-2022b:CFITSIO/4.2.0-GCCcore-12.2.0:giflib/5.2.1-GCCcore-12.2.0:json-c/0.16-GCCcore-12.2.0:Xerces-C++/3.2.4-GCCcore-12.2.0:Imath/3.1.6-GCCcore-12.2.0:OpenEXR/3.1.5-GCCcore-12.2.0:Highway/1.0.3-GCCcore-12.2.0:Brunsli/0.1-GCCcore-12.2.0:Qhull/2020.2-GCCcore-12.2.0:LERC/4.0.0-GCCcore-12.2.0:OpenJPEG/2.5.0-GCCcore-12.2.0:GDAL/3.6.2-foss-2022b:MPFR/4.2.0-GCCcore-12.2.0:libgit2/1.5.0-GCCcore-12.2.0:R/4.2.2-foss-2022b:RegTools/1.0.0-foss-2022b:snappy/1.1.9-GCCcore-12.2.0:RapidJSON/1.1.0-GCCcore-12.2.0:RE2/2023-03-01-GCCcore-12.2.0:utf8proc/2.8.0-GCCcore-12.2.0:Arrow/11.0.0-gfbf-2022b:arrow-R/11.0.0.3-foss-2022b-R-4.2.2:R-bundle-Bioconductor/3.16-foss-2022b-R-4.2.2:leafcutter/0.2.9-foss-2022b-R-4.2.2"; | |
| os.environ["MAGICK_HOME"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/ImageMagick/7.1.0-53-GCCcore-12.2.0"; | |
| os.environ["MANPATH"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/R/4.2.2-foss-2022b/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GDAL/3.6.2-foss-2022b/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Qhull/2020.2-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/giflib/5.2.1-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/HDF/4.2.15-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libtirpc/1.3.3-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libgeotiff/1.7.1-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/PROJ/9.1.1-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/PCRE/8.45-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/netCDF/4.9.0-gompi-2022b/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/nodejs/18.12.1-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ImageMagick/7.1.0-53-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/LittleCMS/2.14-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/JasPer/4.0.0-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Ghostscript/10.0.0-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GTK3/3.24.35-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/FriBidi/1.0.12-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GSL/2.7-GCC-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ICU/72.1-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libsndfile/1.2.0-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/LAME/3.100-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/FLAC/1.4.2-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/NLopt/2.7.1-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Tk/8.6.12-GCCcore-12.2.0/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Java/11.0.20/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/LibTIFF/4.4.0-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/NASM/2.15.05-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/PCRE2/10.40-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/gettext/0.21.1-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/zstd/1.5.2-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/lz4/1.9.4-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/gzip/1.12-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/X11/20221110-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/util-linux/2.38.1-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/freetype/2.12.1-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libpng/1.6.38-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Python/3.10.8-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libffi/3.4.4-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/SQLite/3.39.4-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Tcl/8.6.12-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Tcl/8.6.12-GCCcore-12.2.0/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libreadline/8.2-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/SAMtools/1.17-GCC-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/cURL/7.86.0-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/bzip2/1.0.8-GCCcore-12.2.0/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ncurses/6.3-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/FFTW/3.3.10-GCC-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/FlexiBLAS/3.2.1-GCC-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenMPI/4.1.4-GCC-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libfabric/1.16.1-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/hwloc/2.8.0-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libxml2/2.10.3-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/XZ/5.2.7-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/numactl/2.0.16-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/binutils/2.39-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/zlib/1.2.12-GCCcore-12.2.0/share/man:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GCCcore/12.2.0/share/man:/cvmfs/soft.computecanada.ca/custom/software/lmod/lmod/share/man::/opt/puppetlabs/puppet/share/man"; | |
| os.environ["MODULEPATH"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/modules/all"; | |
| os.environ["PATH"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Arrow/11.0.0-gfbf-2022b/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/RegTools/1.0.0-foss-2022b/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/R/4.2.2-foss-2022b/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libgit2/1.5.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GDAL/3.6.2-foss-2022b/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenJPEG/2.5.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Qhull/2020.2-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Brunsli/0.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenEXR/3.1.5-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Xerces-C++/3.2.4-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/giflib/5.2.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/CFITSIO/4.2.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/HDF/4.2.15-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/SciPy-bundle/2023.02-gfbf-2022b/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/pybind11/2.10.3-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libgeotiff/1.7.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/PROJ/9.1.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/PCRE/8.45-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GEOS/3.11.1-GCC-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/netCDF/4.9.0-gompi-2022b/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/nodejs/18.12.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GLPK/5.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ImageMagick/7.1.0-53-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/LittleCMS/2.14-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/JasPer/4.0.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Ghostscript/10.0.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GTK3/3.24.35-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Pango/1.50.12-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/FriBidi/1.0.12-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/HarfBuzz/5.3.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Gdk-Pixbuf/2.42.10-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/DBus/1.15.2-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GSL/2.7-GCC-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/UDUNITS/2.2.28-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/HDF5/1.14.0-gompi-2022b/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ICU/72.1-GCCcore-12.2.0/sbin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ICU/72.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libsndfile/1.2.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/LAME/3.100-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/FLAC/1.4.2-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Tk/8.6.12-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Java/11.0.20:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Java/11.0.20/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/LibTIFF/4.4.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libdeflate/1.15-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/jbigkit/2.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libjpeg-turbo/2.1.4-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/NASM/2.15.05-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/cairo/1.17.4-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GLib/2.75.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/PCRE2/10.40-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/gettext/0.21.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/LLVM/15.0.5-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/zstd/1.5.2-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/lz4/1.9.4-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/gzip/1.12-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/X11/20221110-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/fontconfig/2.14.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/util-linux/2.38.1-GCCcore-12.2.0/sbin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/util-linux/2.38.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/freetype/2.12.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Brotli/1.0.9-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libpng/1.6.38-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/expat/2.4.9-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Python/3.10.8-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/SQLite/3.39.4-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Tcl/8.6.12-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/SAMtools/1.17-GCC-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/cURL/7.86.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/bzip2/1.0.8-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ncurses/6.3-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/FFTW/3.3.10-GCC-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/FlexiBLAS/3.2.1-GCC-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenMPI/4.1.4-GCC-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/UCC/1.1.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/PMIx/4.2.2-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libfabric/1.16.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/UCX/1.13.1-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libevent/2.1.12-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenSSL/1.1/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/hwloc/2.8.0-GCCcore-12.2.0/sbin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/hwloc/2.8.0-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libxml2/2.10.3-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/XZ/5.2.7-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/numactl/2.0.16-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/binutils/2.39-GCCcore-12.2.0/bin:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GCCcore/12.2.0/bin:/home/boegelbot/easybuild/easybuild-framework:/home/boegelbot/.local/bin:/home/boegelbot/.yarn/bin:/home/boegelbot/.config/yarn/global/node_modules/.bin:/home/boegelbot/.local/bin:/home/boegelbot/bin:/opt/software/slurm/bin:/home/boegelbot/easybuild/easybuild-framework:/home/boegelbot/.local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/opt/puppetlabs/bin"; | |
| os.environ["PKG_CONFIG_PATH"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Arrow/11.0.0-gfbf-2022b/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/utf8proc/2.8.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/RE2/2023-03-01-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/RapidJSON/1.1.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/R/4.2.2-foss-2022b/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libgit2/1.5.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/MPFR/4.2.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GDAL/3.6.2-foss-2022b/lib64/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenJPEG/2.5.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/LERC/4.0.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Qhull/2020.2-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Highway/1.0.3-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/OpenEXR/3.1.5-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Imath/3.1.6-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Xerces-C++/3.2.4-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/json-c/0.16-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/CFITSIO/4.2.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Armadillo/11.4.3-foss-2022b/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/arpack-ng/3.8.0-foss-2022b/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libtirpc/1.3.3-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/pybind11/2.10.3-GCCcore-12.2.0/share/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/PROJ/9.1.1-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/nlohmann_json/3.11.2-GCCcore-12.2.0/share/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/PCRE/8.45-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GEOS/3.11.1-GCC-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/netCDF/4.9.0-gompi-2022b/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ImageMagick/7.1.0-53-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/LittleCMS/2.14-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/JasPer/4.0.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GTK3/3.24.35-GCCcore-12.2.0/share/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GTK3/3.24.35-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libepoxy/1.5.10-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Pango/1.50.12-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/FriBidi/1.0.12-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/HarfBuzz/5.3.1-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Gdk-Pixbuf/2.42.10-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/at-spi2-atk/2.38.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/at-spi2-core/2.46.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/DBus/1.15.2-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ATK/2.38.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GSL/2.7-GCC-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/HDF5/1.14.0-gompi-2022b/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/ICU/72.1-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libsndfile/1.2.0-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libopus/1.3.1-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libvorbis/1.3.7-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/FLAC/1.4.2-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/libogg/1.3.5-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/NLopt/2.7.1-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Tk/8.6.12-GCCcore-12.2.0/lib/pkgconfig:/project/def-maintainers/boegelbot/Rocky8/zen2/software/LibTIFF/4.4.0-GCCcore-12.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| |
| os.environ["PYTHONPATH"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Arrow/11.0.0-gfbf-2022b/lib/python3.10/site-packages:/project/def-maintainers/boegelbot/Rocky8/zen2/software/GDAL/3.6.2-foss-2022b/lib/python3.10/site-packages:/project/def-maintainers/boegelbot/Rocky8/zen2/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages:/project/def-maintainers/boegelbot/Rocky8/zen2/software/pybind11/2.10.3-GCCcore-12.2.0/lib/python3.10/site-packages:/project/def-maintainers/boegelbot/Rocky8/zen2/software/PyYAML/6.0-GCCcore-12.2.0/lib/python3.10/site-packages:/project/def-maintainers/boegelbot/Rocky8/zen2/software/Python/3.10.8-GCCcore-12.2.0/easybuild/python"; | |
| os.environ["R_LIBS_SITE"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/leafcutter/0.2.9-foss-2022b-R-4.2.2:/project/def-maintainers/boegelbot/Rocky8/zen2/software/R-bundle-Bioconductor/3.16-foss-2022b-R-4.2.2:/project/def-maintainers/boegelbot/Rocky8/zen2/software/arrow-R/11.0.0.3-foss-2022b-R-4.2.2"; | |
| os.environ["XDG_DATA_DIRS"] = 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| |
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| |
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| os.environ["_ModuleTable113_"] = "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"; | |
| os.environ["_ModuleTable114_"] = "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"; | |
| os.environ["_ModuleTable115_"] = "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"; | |
| os.environ["_ModuleTable_Sz_"] = "115"; | |
| os.environ["__EGL_VENDOR_LIBRARY_DIRS"] = "/project/def-maintainers/boegelbot/Rocky8/zen2/software/Mesa/22.2.4-GCCcore-12.2.0/share/glvnd/egl_vendor.d:/etc/glvnd/egl_vendor.d:/usr/share/glvnd/egl_vendor.d"; | |
| _mlstatus = True | |
| ; stderr: | |
| == 2023-08-22 17:30:20,371 modules.py:1375 DEBUG Output found in stdout, seems like '/cvmfs/soft.computecanada.ca/custom/software/lmod/lmod/libexec/lmod python load leafcutter/0.2.9-foss-2022b-R-4.2.2' ran fine | |
| == 2023-08-22 17:30:20,379 environment.py:93 INFO Environment variable OMPI_MCA_rmaps_base_oversubscribe set to 1 (previously undefined) | |
| == 2023-08-22 17:30:20,380 easyblock.py:3204 INFO Checking for banned/required linked shared libraries... | |
| == 2023-08-22 17:30:20,380 run.py:220 DEBUG run_cmd: running cmd flexiblas list (in /project/60006/boegelbot/Rocky8/zen2/software/leafcutter/0.2.9-foss-2022b-R-4.2.2) | |
| == 2023-08-22 17:30:20,380 run.py:246 INFO running cmd: flexiblas list | |
| == 2023-08-22 17:30:20,436 run.py:688 DEBUG cmd "flexiblas list" exited with exit code 0 and output: | |
| System-wide: | |
| System-wide (config directory): | |
| OPENBLAS | |
| library = libflexiblas_openblas.so | |
| comment = | |
| BLIS | |
| library = libflexiblas_blis.so | |
| comment = | |
| NETLIB | |
| library = libflexiblas_netlib.so | |
| comment = | |
| IMKL | |
| library = libflexiblas_imkl_gnu_thread.so | |
| comment = | |
| IMKL_SEQ | |
| library = libflexiblas_imkl_sequential.so | |
| comment = | |
| User config: | |
| Host config: | |
| Enviroment config: | |
| == 2023-08-22 17:30:20,436 run.py:724 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2023-08-22 17:30:20,436 easyblock.py:3226 INFO Banned libraries to check for: libopenblas.so, libblis.so, libnetlib.so, libimkl_gnu_thread.so, libimkl_sequential.so | |
| == 2023-08-22 17:30:20,436 easyblock.py:3250 DEBUG Regular expressions to check for banned libraries: '(/|\s)libopenblas\.so' | |
| '(/|\s)libblis\.so' | |
| '(/|\s)libnetlib\.so' | |
| '(/|\s)libimkl_gnu_thread\.so' | |
| '(/|\s)libimkl_sequential\.so' | |
| == 2023-08-22 17:30:20,436 easyblock.py:3266 INFO Using default subdirectories to check for banned/required linked shared libraries: ('bin', 'lib', 'lib64') | |
| == 2023-08-22 17:30:20,436 easyblock.py:3635 DEBUG Skipping RPATH sanity check | |
| == 2023-08-22 17:30:20,532 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/easybuild-framework/easybuild/base/exceptions.py:126 in __init__): Sanity check failed: command "R -q --no-save" (stdin: "library(leafcutter)") failed; output: | |
| /bin/bash: R: command not found (at easybuild/easybuild-framework/easybuild/framework/easyblock.py:3639 in _sanity_check_step) | |
| == 2023-08-22 17:30:20,532 build_log.py:267 INFO ... (took 6 secs) | |
| == 2023-08-22 17:30:20,532 config.py:694 DEBUG software install path as specified by 'installpath' and 'subdir_software': /project/def-maintainers/boegelbot/Rocky8/zen2/software | |
| == 2023-08-22 17:30:20,533 filetools.py:2014 INFO Removing lock /project/def-maintainers/boegelbot/Rocky8/zen2/software/.locks/_project_def-maintainers_boegelbot_Rocky8_zen2_software_leafcutter_0.2.9-foss-2022b-R-4.2.2.lock... | |
| == 2023-08-22 17:30:20,533 filetools.py:383 INFO Path /project/def-maintainers/boegelbot/Rocky8/zen2/software/.locks/_project_def-maintainers_boegelbot_Rocky8_zen2_software_leafcutter_0.2.9-foss-2022b-R-4.2.2.lock successfully removed. | |
| == 2023-08-22 17:30:20,533 filetools.py:2018 INFO Lock removed: /project/def-maintainers/boegelbot/Rocky8/zen2/software/.locks/_project_def-maintainers_boegelbot_Rocky8_zen2_software_leafcutter_0.2.9-foss-2022b-R-4.2.2.lock | |
| == 2023-08-22 17:30:20,533 easyblock.py:4261 WARNING build failed (first 300 chars): Sanity check failed: command "R -q --no-save" (stdin: "library(leafcutter)") failed; output: | |
| /bin/bash: R: command not found | |
| == 2023-08-22 17:30:20,533 easyblock.py:328 INFO Closing log for application name leafcutter version 0.2.9 |
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