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boegelbot / pyGenomeTracks-3.9-foss-2023a_partial.log
Created June 25, 2024 14:21
(partial) EasyBuild log for failed build of /tmp/eb-gd90qlrj/files_pr20881/p/pyGenomeTracks/pyGenomeTracks-3.9-foss-2023a.eb (PR(s) #20881)
os.environ["EBDEVELBROTLI"] = "/project/boegelbot/Rocky8/haswell/software/Brotli/1.0.9-GCCcore-12.3.0/easybuild/Brotli-1.0.9-GCCcore-12.3.0-easybuild-devel";
os.environ["EBDEVELBXMINPYTHON"] = "/project/boegelbot/Rocky8/haswell/software/bx-python/0.10.0-foss-2023a/easybuild/bx-python-0.10.0-foss-2023a-easybuild-devel";
os.environ["EBDEVELBZIP2"] = "/project/boegelbot/Rocky8/haswell/software/bzip2/1.0.8-GCCcore-12.3.0/easybuild/bzip2-1.0.8-GCCcore-12.3.0-easybuild-devel";
os.environ["EBDEVELCFFI"] = "/project/boegelbot/Rocky8/haswell/software/cffi/1.15.1-GCCcore-12.3.0/easybuild/cffi-1.15.1-GCCcore-12.3.0-easybuild-devel";
os.environ["EBDEVELCOOLER"] = "/project/boegelbot/Rocky8/haswell/software/cooler/0.10.2-foss-2023a/easybuild/cooler-0.10.2-foss-2023a-easybuild-devel";
os.environ["EBDEVELCRYPTOGRAPHY"] = "/project/boegelbot/Rocky8/haswell/software/cryptography/41.0.1-GCCcore-12.3.0/easybuild/cryptography-41.0.1-GCCcore-12.3.0-easybuild-devel";
os.environ["EBDEVELCURL"] = "/project/boegelbot/Rocky8/haswell/s
@boegelbot
boegelbot / easybuild_test_report_20901_easybuilders_preasybuild-easyconfigs_20241625-UTC-14-16-49.md
Created June 25, 2024 14:16
EasyBuild test report for easybuilders/easybuild-easyconfigs PR(s) #20901

Test report for PR(s) easybuilders/easybuild-easyconfigs#20901

Test result

Build succeeded for 0 out of 3 (3 easyconfigs in total)

Overview of tested easyconfigs (in order)

@boegelbot
boegelbot / GDAL-3.9.0-foss-2023b_partial.log
Created June 25, 2024 14:16
(partial) EasyBuild log for failed build of /tmp/eb-sx9n5wkl/files_pr20901/g/GDAL/GDAL-3.9.0-foss-2023b.eb (PR(s) #20901)
== 2024-06-25 14:15:37,688 environment.py:93 INFO Environment variable EBVAROMPI_CXX set to g++ (previously undefined)
== 2024-06-25 14:15:37,689 toolchain.py:1127 DEBUG _setenv_variables: setting environment variable OMPI_F77 to gfortran
== 2024-06-25 14:15:37,689 environment.py:93 INFO Environment variable OMPI_F77 set to gfortran (previously undefined)
== 2024-06-25 14:15:37,689 environment.py:93 INFO Environment variable EBVAROMPI_F77 set to gfortran (previously undefined)
== 2024-06-25 14:15:37,689 toolchain.py:1127 DEBUG _setenv_variables: setting environment variable OMPI_F90 to gfortran
== 2024-06-25 14:15:37,689 environment.py:93 INFO Environment variable OMPI_F90 set to gfortran (previously undefined)
== 2024-06-25 14:15:37,689 environment.py:93 INFO Environment variable EBVAROMPI_F90 set to gfortran (previously undefined)
== 2024-06-25 14:15:37,689 toolchain.py:1127 DEBUG _setenv_variables: setting environment variable OMPI_FC to gfortran
== 2024-06-25 14:15:37,689 environment.py:93 INFO Environmen
@boegelbot
boegelbot / GDAL-3.7.1-foss-2023a_partial.log
Created June 25, 2024 14:16
(partial) EasyBuild log for failed build of /tmp/eb-sx9n5wkl/files_pr20901/g/GDAL/GDAL-3.7.1-foss-2023a.eb (PR(s) #20901)
== 2024-06-25 14:11:54,960 toolchain.py:1127 DEBUG _setenv_variables: setting environment variable MPI_LIB_DIR to /project/boegelbot/Rocky8/haswell/software/OpenMPI/4.1.5-GCC-12.3.0/lib64
== 2024-06-25 14:11:54,960 environment.py:93 INFO Environment variable MPI_LIB_DIR set to /project/boegelbot/Rocky8/haswell/software/OpenMPI/4.1.5-GCC-12.3.0/lib64 (previously undefined)
== 2024-06-25 14:11:54,960 environment.py:93 INFO Environment variable EBVARMPI_LIB_DIR set to /project/boegelbot/Rocky8/haswell/software/OpenMPI/4.1.5-GCC-12.3.0/lib64 (previously undefined)
== 2024-06-25 14:11:54,960 toolchain.py:1127 DEBUG _setenv_variables: setting environment variable MPI_LIB_SHARED to /project/boegelbot/Rocky8/haswell/software/OpenMPI/4.1.5-GCC-12.3.0/lib64/libmpi.so
== 2024-06-25 14:11:54,960 environment.py:93 INFO Environment variable MPI_LIB_SHARED set to /project/boegelbot/Rocky8/haswell/software/OpenMPI/4.1.5-GCC-12.3.0/lib64/libmpi.so (previously undefined)
== 2024-06-25 14:11:54,960 environment.py:93 INFO Enviro
@boegelbot
boegelbot / GDAL-3.6.2-foss-2022b_partial.log
Created June 25, 2024 14:16
(partial) EasyBuild log for failed build of /tmp/eb-sx9n5wkl/files_pr20901/g/GDAL/GDAL-3.6.2-foss-2022b.eb (PR(s) #20901)
== 2024-06-25 14:08:02,511 environment.py:93 INFO Environment variable EBVARMPI_LIB_SHARED set to /project/boegelbot/Rocky8/haswell/software/OpenMPI/4.1.4-GCC-12.2.0/lib64/libmpi.so (previously undefined)
== 2024-06-25 14:08:02,511 toolchain.py:1127 DEBUG _setenv_variables: setting environment variable MPI_LIB_STATIC to
== 2024-06-25 14:08:02,511 environment.py:93 INFO Environment variable MPI_LIB_STATIC set to (previously undefined)
== 2024-06-25 14:08:02,511 environment.py:93 INFO Environment variable EBVARMPI_LIB_STATIC set to (previously undefined)
== 2024-06-25 14:08:02,511 toolchain.py:1127 DEBUG _setenv_variables: setting environment variable OMPI_CC to gcc
== 2024-06-25 14:08:02,512 environment.py:93 INFO Environment variable OMPI_CC set to gcc (previously undefined)
== 2024-06-25 14:08:02,512 environment.py:93 INFO Environment variable EBVAROMPI_CC set to gcc (previously undefined)
== 2024-06-25 14:08:02,512 toolchain.py:1127 DEBUG _setenv_variables: setting environment variable OMPI_CXX to g++
==
@boegelbot
boegelbot / easybuild_test_report_20891_easybuilders_preasybuild-easyconfigs_20241125-UTC-14-11-42.md
Created June 25, 2024 14:11
EasyBuild test report for easybuilders/easybuild-easyconfigs PR(s) #20891

Test report for PR(s) easybuilders/easybuild-easyconfigs#20891

Test result

Build succeeded for 3 out of 3 (3 easyconfigs in total)

Overview of tested easyconfigs (in order)

  • SUCCESS RapidJSON-1.1.0-20240409-GCCcore-13.2.0.eb
  • SUCCESS utf8proc-2.9.0-GCCcore-13.2.0.eb
  • SUCCESS Arrow-16.1.0-gfbf-2023b.eb
@boegelbot
boegelbot / easybuild_test_report_20881_easybuilders_preasybuild-easyconfigs_20240625-UTC-14-06-08.md
Created June 25, 2024 14:06
EasyBuild test report for easybuilders/easybuild-easyconfigs PR(s) #20881
@boegelbot
boegelbot / TOBIAS-0.16.1-foss-2023a_partial.log
Created June 25, 2024 14:06
(partial) EasyBuild log for failed build of /tmp/eb-7_y6pr_g/files_pr20881/t/TOBIAS/TOBIAS-0.16.1-foss-2023a.eb (PR(s) #20881)
== 2024-06-25 14:06:01,414 modules.py:1471 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python --terse list' ran fine
== 2024-06-25 14:06:01,415 modules.py:814 DEBUG Current MODULEPATH: /tmp/eb-7_y6pr_g/tmp0vaxzp7_/all:/project/def-maintainers/boegelbot/rocky9/zen3/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
== 2024-06-25 14:06:01,415 modules.py:823 DEBUG Changing LD_LIBRARY_PATH from '/opt/software/slurm/lib64' to '/opt/software/slurm/lib64:/opt/software/slurm/lib64' in environment for module command
== 2024-06-25 14:06:01,415 modules.py:828 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python load TOBIAS/0.16.1-foss-2023a' from /tmp/boegelbot/TOBIAS/0.16.1/foss-2023a/tobias/tobias-0.16.1
== 2024-06-25 14:06:02,904 modules.py:835 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python load TOBIAS/0.16.1-foss-2023a': stdout: import os
os.envir
@boegelbot
boegelbot / pyGenomeTracks-3.9-foss-2023a_partial.log
Created June 25, 2024 14:06
(partial) EasyBuild log for failed build of /tmp/eb-7_y6pr_g/files_pr20881/p/pyGenomeTracks/pyGenomeTracks-3.9-foss-2023a.eb (PR(s) #20881)
os.environ["EBDEVELCFFI"] = "/project/def-maintainers/boegelbot/rocky9/zen3/software/cffi/1.15.1-GCCcore-12.3.0/easybuild/cffi-1.15.1-GCCcore-12.3.0-easybuild-devel";
os.environ["EBDEVELCOOLER"] = "/project/def-maintainers/boegelbot/rocky9/zen3/software/cooler/0.10.2-foss-2023a/easybuild/cooler-0.10.2-foss-2023a-easybuild-devel";
os.environ["EBDEVELCRYPTOGRAPHY"] = "/project/def-maintainers/boegelbot/rocky9/zen3/software/cryptography/41.0.1-GCCcore-12.3.0/easybuild/cryptography-41.0.1-GCCcore-12.3.0-easybuild-devel";
os.environ["EBDEVELCURL"] = "/project/def-maintainers/boegelbot/rocky9/zen3/software/cURL/8.0.1-GCCcore-12.3.0/easybuild/cURL-8.0.1-GCCcore-12.3.0-easybuild-devel";
os.environ["EBDEVELEXPAT"] = "/project/def-maintainers/boegelbot/rocky9/zen3/software/expat/2.5.0-GCCcore-12.3.0/easybuild/expat-2.5.0-GCCcore-12.3.0-easybuild-devel";
os.environ["EBDEVELFFTW"] = "/project/def-maintainers/boegelbot/rocky9/zen3/software/FFTW/3.3.10-GCC-12.3.0/easybuild/FFTW-3.3.10-GCC-12.3.0-easybuild-devel";
os.enviro
@boegelbot
boegelbot / easybuild_test_report_20891_easybuilders_preasybuild-easyconfigs_20240225-UTC-14-02-09.md
Created June 25, 2024 14:02
EasyBuild test report for easybuilders/easybuild-easyconfigs PR(s) #20891

Test report for PR(s) easybuilders/easybuild-easyconfigs#20891

Test result

Build succeeded for 3 out of 3 (3 easyconfigs in total)

Overview of tested easyconfigs (in order)

  • SUCCESS RapidJSON-1.1.0-20240409-GCCcore-13.2.0.eb
  • SUCCESS utf8proc-2.9.0-GCCcore-13.2.0.eb
  • SUCCESS Arrow-16.1.0-gfbf-2023b.eb