Created
June 29, 2023 14:54
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Count 0,1,2,5 per animal genotypes
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| awk 'BEGIN { | |
| OFS = "," | |
| print "ID", 0, 1, 2, 5 | |
| } | |
| { | |
| for (i = 2; i <= NF; i++) { | |
| count[$1,$i]++ | |
| } | |
| vals[$1] = $1 | |
| } | |
| END { | |
| for (id in vals) { | |
| print id, count[id, 0]+0, count[id, 1]+0, count[id, 2]+0, count[id, 5]+0 | |
| } | |
| }' data.txt |
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