EasyBuild test report for easybuilders/easybuild-easyconfigs PR(s) #17760

easybuild_test_report_17760_easybuilders_preasybuild-easyconfigs_20232626-UTC-11-26-52.md

Test report for PR(s) easybuilders/easybuild-easyconfigs#17760

Test result

Build succeeded for 10 out of 10 (10 easyconfigs in total)

Overview of tested easyconfigs (in order)

• SUCCESS zlib-1.2.13.eb
• SUCCESS binutils-2.40.eb
• SUCCESS GCCcore-13.1.0.eb
• SUCCESS help2man-1.49.3-GCCcore-13.1.0.eb
• SUCCESS M4-1.4.19-GCCcore-13.1.0.eb
• SUCCESS zlib-1.2.13-GCCcore-13.1.0.eb
• SUCCESS Bison-3.8.2-GCCcore-13.1.0.eb
• SUCCESS flex-2.6.4-GCCcore-13.1.0.eb
• SUCCESS binutils-2.40-GCCcore-13.1.0.eb
• SUCCESS GCC-13.1.0.eb

Time info

• start: Wed, 26 Apr 2023 10:40:37 +0000 (UTC)
• end: Wed, 26 Apr 2023 11:26:52 +0000 (UTC)

EasyBuild info

• easybuild-framework version: 4.7.2.dev0-rf725e611ae331ccb1ded5925253ae60b9212c5ee
• easybuild-easyblocks version: 4.7.2.dev0-r8bf2d9085c26dd59aab4c49066fd1de3f0ba6b46
• command line:

eb --from-pr 17760 -Tur

• full configuration (includes defaults):

--accept-eula-for='Intel-oneAPI,NVHPC'
--accept-eula=''
--allow-loaded-modules='EasyBuild'
--buildpath='/dev/shm/branfosj/build-up-Ubuntu20.04'
--check-ebroot-env-vars='warn'
--cleanup-builddir
--cleanup-easyconfigs
--cleanup-tmpdir
--color='auto'
--container-type='singularity'
--containerpath='/rds/homes/b/branfosj/.local/easybuild/containers'
--default-opt-level='defaultopt'
--detect-loaded-modules='warn'
--disable-add-dummy-to-minimal-toolchains
--disable-add-system-to-minimal-toolchains
--disable-allow-modules-tool-mismatch
--disable-allow-use-as-root-and-accept-consequences
--disable-avail-cfgfile-constants
--disable-avail-easyconfig-constants
--disable-avail-easyconfig-licenses
--disable-avail-easyconfig-params
--disable-avail-easyconfig-templates
--disable-avail-hooks
--disable-avail-module-naming-schemes
--disable-avail-modules-tools
--disable-avail-repositories
--disable-backup-patched-files
--disable-check-conflicts
--disable-check-contrib
--disable-check-eb-deps
--disable-check-github
--disable-check-style
--disable-consider-archived-easyconfigs
--disable-container-build-image
--disable-containerize
--disable-copy-ec
--disable-debug
--disable-debug-lmod
--disable-devel
--disable-dry-run
--disable-dry-run-short
--disable-dump-autopep8
--disable-dump-env-script
--disable-enforce-checksums
--disable-experimental
--disable-extended-dry-run
--disable-fetch
--disable-fix-deprecated-easyconfigs
--disable-force
--disable-group-writable-installdir
--disable-hidden
--disable-ignore-checksums
--disable-ignore-index
--disable-ignore-locks
--disable-ignore-osdeps
--disable-ignore-test-failure
--disable-info
--disable-insecure-download
--disable-install-github-token
--disable-install-latest-eb-release
--disable-job
--disable-last-log
--disable-list-toolchains
--disable-logtostdout
--disable-minimal-toolchains
--disable-missing-modules
--disable-module-depends-on
--disable-module-only
--disable-new-branch-github
--disable-new-pr
--disable-package
--disable-parallel-extensions-install
--disable-pretend
--disable-preview-pr
--disable-quiet
--disable-read-only-installdir
--disable-rebuild
--disable-recursive-module-unload
--disable-regtest
--disable-remove-ghost-install-dirs
--disable-rpath
--disable-sanity-check-only
--disable-sequential
--disable-set-default-module
--disable-set-gid-bit
--disable-show-config
--disable-show-default-configfiles
--disable-show-default-moduleclasses
--disable-show-ec
--disable-show-full-config
--disable-show-system-info
--disable-skip
--disable-skip-extensions
--disable-skip-test-cases
--disable-skip-test-step
--disable-sticky-bit
--disable-terse
--disable-try-ignore-versionsuffixes
--disable-try-update-deps
--disable-unit-testing-mode
--disable-update-modules-tool-cache
--disable-use-existing-modules
--disable-verify-easyconfig-filenames
--download-timeout='10'
--env-for-shebang='/usr/bin/env'
--envvars-user-modules='HOME'
--extended-dry-run-ignore-errors
--filter-rpath-sanity-libs='libcuda.so,libcuda.so.1,libnvidia-ml.so,libnvidia-ml.so.1'
--fixed-installdir-naming-scheme
--from-pr='17760'
--generate-devel-module
--github-user='branfosj'
--hooks='/rds/projects/b/branfosj-bear-apps/apps_scripts/easybuild_hooks.py'
--ignore-dirs='.git,.svn'
--include-easyblocks-from-pr=''
--include-easyblocks=''
--include-module-naming-schemes=''
--include-toolchains=''
--index-max-age='604800'
--installpath='/rds/projects/2017/branfosj-rse/easybuild/U20-cas'
--job-backend='GC3Pie'
--job-eb-cmd='eb'
--job-max-jobs='0'
--job-max-walltime='24'
--job-output-dir='/rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs'
--job-polling-interval='30.0'
--lib-lib64-symlink
--lib64-fallback-sanity-check
--lib64-lib-symlink
--local-var-naming-check='warn'
--logfile-format='easybuild,easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log'
--map-toolchains
--max-fail-ratio-adjust-permissions='0.5'
--minimal-build-env='CC:gcc,CXX:g++'
--module-extensions
--module-naming-scheme='EasyBuildMNS'
--module-syntax='Lua'
--moduleclasses='base,ai,astro,bio,cae,chem,compiler,data,debugger,devel,geo,ide,lang,lib,math,mpi,numlib,perf,quantum,phys,system,toolchain,tools,vis'
--modules-tool-version-check
--modules-tool='Lmod'
--mpi-tests
--output-format='txt'
--output-style='auto'
--package-naming-scheme='EasyBuildPNS'
--package-release='1'
--package-tool-options=''
--package-tool='fpm'
--package-type='rpm'
--packagepath='/rds/homes/b/branfosj/.local/easybuild/packages'
--pr-target-account='easybuilders'
--pr-target-branch='develop'
--pre-create-installdir
--repository='FileRepository'
--repositorypath='/rds/homes/b/branfosj/.local/easybuild/ebfiles_repo'
--robot-paths=''
--robot='/rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs'
--show-progress-bar
--silence-deprecation-warnings=''
--sourcepath='/rds/projects/b/branfosj-bear-apps/sources'
--strict='warn'
--subdir-modules='modules'
--subdir-software='software'
--suffix-modules-path='all'
--test-report-env-filter='^SSH.*|USER|HOSTNAME|UID|.*COOKIE.*|.*LICENSE.*|.*LICENCE.*|ANSYSLI.*|NAG_KUS.*|EB_.*'
--tmpdir='/dev/shm/branfosj/tmp-up-Ubuntu20.04'
--trace
--upload-test-report
--use-ccache='False'
--use-f90cache='False'
--wait-on-lock-interval='60'
--wait-on-lock-limit='0'

System info

• core count: 24
• cpu arch: x86_64
• cpu arch name: cascadelake
• cpu model: Intel(R) Xeon(R) Gold 6248 CPU @ 2.50GHz
• cpu speed: 3900.0
• cpu vendor: Intel
• gcc version: Using built-in specs.; COLLECT_GCC=gcc; COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/9/lto-wrapper; OFFLOAD_TARGET_NAMES=nvptx-none:hsa; OFFLOAD_TARGET_DEFAULT=1; Target: x86_64-linux-gnu; Configured with: ../src/configure -v --with-pkgversion='Ubuntu 9.3.0-17ubuntu120.04' --with-bugurl=file:///usr/share/doc/gcc-9/README.Bugs --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --prefix=/usr --with-gcc-major-version-only --program-suffix=-9 --program-prefix=x86_64-linux-gnu- --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --libdir=/usr/lib --enable-nls --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --with-default-libstdcxx-abi=new --enable-gnu-unique-object --disable-vtable-verify --enable-plugin --enable-default-pie --with-system-zlib --with-target-system-zlib=auto --enable-objc-gc=auto --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --enable-multilib --with-tune=generic --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --without-cuda-driver --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu; Thread model: posix; gcc version 9.3.0 (Ubuntu 9.3.0-17ubuntu120.04) ;
• glibc version: 2.31
• hostname: bear-pg0211u03a.bear.cluster
• os name: Ubuntu
• os type: Linux
• os version: 20.04.2 LTS (Focal Fossa)
• platform name: x86_64-unknown-linux
• python version: 3.8.5 (default, Jan 27 2021, 15:41:15) ; [GCC 9.3.0]
• system gcc path: /usr/bin/gcc
• system python path: /rds/projects/2017/branfosj-rse/easybuild/venv-dev-Ubuntu20.04/bin/python
• total memory: 193101

List of loaded modules

• bb-variables/live
• slurm-helpers/live
• openmpi-env/live
• bear-licences/live
• bb-singularity-conf/live
• bear-apps/2018b/live
• bear-apps/2019a/live
• bear-apps/2019b/live
• bear-apps/handbuilt/2020
• bear-apps/2020a/live
• bear-apps/2020b/live
• bear-apps/2021a/live
• bear-apps/auto-load
• bluebear/live

Environment

APPTAINER_APPNAME = 
APPTAINER_BIND = /rds,/castles,/scratch
APPTAINER_COMMAND = exec
APPTAINER_CONTAINER = /rds/bear-apps/container-images/singularity/x86_64/generic/Ubuntu20.04-BlueBEAR-base-lmod.sif
APPTAINER_ENVIRONMENT = /.singularity.d/env/91-environment.sh
APPTAINER_NAME = Ubuntu20.04-BlueBEAR-base-lmod.sif
BASH_ENV = /usr/share/lmod/lmod/init/bash
BASH_FUNC_ml%% = () {  eval $($LMOD_DIR/ml_cmd "$@")
}
BASH_FUNC_module%% = () {  eval $($LMOD_CMD bash "$@");
 [ $? = 0 ] && eval $(${LMOD_SETTARG_CMD:-:} -s sh)
}
BB_APPS_BASE = U20-cas
BB_APPS_DATA = /rds/bear-apps/apps-data/
BB_CPU = cascadelake
BB_CPU_REAL = cascadelake
BB_EXAMPLES = /rds/bear-apps/EXAMPLES/
BB_FALLBACKCPU = haswell
BB_FALLBACK_APPS_BASE = U20-has
BB_GPGPUS = 0
BB_IB_DETECTED = 0
BB_MACHINE = Metal
BB_OFED = __unknown__
BB_OSBASE = Ubuntu20.04
EASYBUILD_ACCEPT_EULA_FOR = Intel-oneAPI,NVHPC
EASYBUILD_BUILDPATH = /dev/shm/branfosj/build-up-Ubuntu20.04
EASYBUILD_HOOKS = /rds/projects/b/branfosj-bear-apps/apps_scripts/easybuild_hooks.py
EASYBUILD_INSTALLPATH = /rds/projects/2017/branfosj-rse/easybuild/U20-cas
EASYBUILD_MODULES_TOOL = Lmod
EASYBUILD_MODULE_EXTENSIONS = 1
EASYBUILD_SOURCEPATH = /rds/projects/b/branfosj-bear-apps/sources
EASYBUILD_TEST_REPORT_ENV_FILTER = ^SSH.*|USER|HOSTNAME|UID|.*COOKIE.*|.*LICENSE.*|.*LICENCE.*|ANSYSLI.*|NAG_KUS.*|EB_.*
EASYBUILD_TMPDIR = /dev/shm/branfosj/tmp-up-Ubuntu20.04
EDITOR = /usr/bin/vim
FANCYLOGGER_IGNORE_MPI4PY = 1
HOME = /rds/homes/b/branfosj
LANG = C
LC_CTYPE = C.UTF-8
LD_LIBRARY_PATH = /.singularity.d/libs
LMOD_CACHED_LOADS = no
LMOD_CMD = /usr/share/lmod/lmod/libexec/lmod
LMOD_COLORIZE = yes
LMOD_DEFAULT_MODULEPATH = /rds/projects/2017/branfosj-rse/easybuild/U20-cas/modules:/rds/projects/2017/branfosj-rse/easybuild/U20-cas/modules/all:/etc/lmod/modules:/usr/share/lmod/lmod/modulefiles:/rds/bear-apps/system/modules
LMOD_DIR = /usr/share/lmod/lmod/libexec
LMOD_FULL_SETTARG_SUPPORT = no
LMOD_PKG = /usr/share/lmod/lmod
LMOD_PREPEND_BLOCK = normal
LMOD_SETTARG_CMD = :
LMOD_SHORT_TIME = 86400
LMOD_VERSION = 6.6
LMOD_arch = x86_64
LMOD_sys = Linux
LOADEDMODULES = bb-variables/live:slurm-helpers/live:openmpi-env/live:bear-licences/live:bb-singularity-conf/live:bear-apps/2018b/live:bear-apps/2019a/live:bear-apps/2019b/live:bear-apps/handbuilt/2020:bear-apps/2020a/live:bear-apps/2020b/live:bear-apps/2021a/live:bear-apps/auto-load:bluebear/live
MANPATH = /usr/share/lmod/lmod/share/man::
MODULEPATH = /rds/projects/2017/branfosj-rse/easybuild/U20-cas/modules:/rds/projects/2017/branfosj-rse/easybuild/U20-cas/modules/all:/etc/lmod/modules:/usr/share/lmod/lmod/modulefiles:/rds/bear-apps/system/modules
MODULEPATH_ROOT = /usr/modulefiles
MODULESHOME = /usr/share/lmod/lmod
OLDPWD = /rds/projects/2017/branfosj-rse/easybuild/src
OMP_NUM_THREADS = 1
PATH = /rds/projects/2017/branfosj-rse/easybuild/venv-dev-Ubuntu20.04/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers/container-na:/rds/bear-apps/system/software/slurm-helpers:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts/:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch
PWD = /rds/projects/2017/branfosj-rse/easybuild/src/easybuild-easyconfigs/easybuild/easyconfigs
PYTHONOPTIMIZE = 1
SHLVL = 2
SINGULARITY_BIND = /rds,/castles,/scratch
SINGULARITY_CONTAINER = /rds/bear-apps/container-images/singularity/x86_64/generic/Ubuntu20.04-BlueBEAR-base-lmod.sif
SINGULARITY_ENVIRONMENT = /.singularity.d/env/91-environment.sh
SINGULARITY_NAME = Ubuntu20.04-BlueBEAR-base-lmod.sif
SYS_TYPE = cascadelake-Ubuntu20.04
TERM = screen
TMPDIR = /tmp
VIRTUAL_ENV = /rds/projects/2017/branfosj-rse/easybuild/venv-dev-Ubuntu20.04
_ = /rds/projects/2017/branfosj-rse/easybuild/venv-dev-Ubuntu20.04/bin/python
_LMFILES_ = /rds/bear-apps/system/modules/bb-variables/live:/rds/bear-apps/system/modules/slurm-helpers/live:/rds/bear-apps/system/modules/openmpi-env/live:/rds/bear-apps/system/modules/bear-licences/live:/rds/bear-apps/system/modules/bb-singularity-conf/live:/rds/bear-apps/system/modules/bear-apps/2018b/live:/rds/bear-apps/system/modules/bear-apps/2019a/live:/rds/bear-apps/system/modules/bear-apps/2019b/live:/rds/bear-apps/system/modules/bear-apps/handbuilt/2020:/rds/bear-apps/system/modules/bear-apps/2020a/live:/rds/bear-apps/system/modules/bear-apps/2020b/live:/rds/bear-apps/system/modules/bear-apps/2021a/live:/rds/bear-apps/system/modules/bear-apps/auto-load:/rds/bear-apps/system/modules/bluebear/live
_ModuleTable001_ = 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
_ModuleTable002_ = 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
_ModuleTable003_ = 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
_ModuleTable004_ = 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