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May 8, 2024 15:52
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(partial) EasyBuild log for failed build of /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/files_pr20496/p/PSM2/PSM2-12.0.1-GCCcore-11.2.0.eb (PR(s) #20496)
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vis/jbigkit/2.1-GCCcore-10.3.0 | |
vis/jbigkit/2.1-GCCcore-11.2.0 | |
vis/jbigkit/2.1-GCCcore-11.3.0 | |
vis/jbigkit/2.1-GCCcore-12.2.0 | |
vis/jbigkit/2.1-GCCcore-12.3.0 | |
vis/jbigkit/2.1-GCCcore-13.2.0 | |
vis/libGLU/9.0.1-GCCcore-10.2.0 | |
vis/libGLU/9.0.1-GCCcore-10.3.0 | |
vis/libGLU/9.0.2-GCCcore-11.2.0 | |
vis/libGLU/9.0.2-GCCcore-11.3.0 | |
vis/libGLU/9.0.2-GCCcore-12.2.0 | |
vis/libGLU/9.0.3-GCCcore-12.3.0 | |
vis/libGLU/9.0.3-GCCcore-13.2.0 | |
vis/matplotlib/3.3.3-foss-2020b | |
vis/matplotlib/3.3.3-fosscuda-2020b | |
vis/matplotlib/3.4.2-foss-2021a | |
vis/matplotlib/3.4.3-foss-2021b | |
vis/matplotlib/3.4.3-intel-2021b | |
vis/matplotlib/3.5.2-foss-2022a | |
vis/matplotlib/3.5.2-intel-2022a | |
vis/matplotlib/3.7.0-gfbf-2022b | |
vis/matplotlib/3.7.2-gfbf-2023a | |
vis/matplotlib/3.7.2-iimkl-2023a | |
vis/motif/2.3.8-GCCcore-10.2.0 | |
vis/motif/2.3.8-GCCcore-11.2.0 | |
vis/motif/2.3.8-GCCcore-12.2.0 | |
vis/motif/2.3.8-GCCcore-12.3.0 | |
vis/napari/0.4.18-foss-2023a | |
vis/openslide-python/1.2.0-GCCcore-11.3.0 | |
vis/pixman/0.40.0-GCCcore-10.2.0 | |
vis/pixman/0.40.0-GCCcore-10.3.0 | |
vis/pixman/0.40.0-GCCcore-11.2.0 | |
vis/pixman/0.40.0-GCCcore-11.3.0 | |
vis/pixman/0.42.2-GCCcore-12.2.0 | |
vis/pixman/0.42.2-GCCcore-12.3.0 | |
vis/pixman/0.42.2-GCCcore-13.2.0 | |
vis/plotly.py/5.12.0-GCCcore-11.3.0 | |
vis/pp-sketchlib/2.1.1-foss-2022a | |
vis/pydicom/2.2.2-GCCcore-10.3.0 | |
vis/pydicom/2.3.0-GCCcore-11.3.0 | |
vis/pydot/1.4.2-GCCcore-10.3.0 | |
vis/pydot/1.4.2-GCCcore-11.3.0 | |
vis/pygraphviz/1.7-foss-2021a | |
vis/python-xlib/0.32-GCCcore-10.3.0 | |
vis/pytorch-CycleGAN-pix2pix/20230314-foss-2022a-CUDA-11.7.0 | |
vis/scikit-image/0.18.3-foss-2021a | |
vis/scikit-image/0.19.3-foss-2022a | |
vis/scikit-image/0.22.0-foss-2023a | |
vis/scikit-plot/0.3.7-foss-2022b | |
vis/tensorboardX/2.5.1-foss-2022a | |
vis/tesseract/5.3.0-GCCcore-11.3.0 | |
vis/torchvision/0.11.3-foss-2021a | |
vis/torchvision/0.13.1-foss-2022a-CUDA-11.7.0 | |
vis/torchvision/0.13.1-foss-2022a | |
vis/wxPython/4.1.1-foss-2021a | |
vis/wxPython/4.2.0-foss-2021b | |
vis/wxPython/4.2.1-foss-2022a | |
vis/wxWidgets/3.2.0-GCC-11.2.0 | |
vis/wxWidgets/3.2.1-GCC-11.3.0 | |
vis/x264/20190925-GCCcore-8.3.0 | |
vis/x264/20191217-GCCcore-9.3.0 | |
vis/x264/20201026-GCCcore-10.2.0 | |
vis/x264/20210414-GCCcore-10.3.0 | |
vis/x264/20210613-GCCcore-11.2.0 | |
vis/x264/20220620-GCCcore-11.3.0 | |
vis/x264/20230226-GCCcore-12.2.0 | |
vis/x264/20230226-GCCcore-12.3.0 | |
vis/x264/20231019-GCCcore-13.2.0 | |
vis/x265/3.3-GCCcore-10.2.0 | |
vis/x265/3.5-GCCcore-10.3.0 | |
vis/x265/3.5-GCCcore-11.2.0 | |
vis/x265/3.5-GCCcore-11.3.0 | |
vis/x265/3.5-GCCcore-12.2.0 | |
vis/x265/3.5-GCCcore-12.3.0 | |
vis/x265/3.5-GCCcore-13.2.0 | |
vis/xpdf/4.04-GCCcore-12.3.0 | |
vis/xprop/1.2.5-GCCcore-10.3.0 | |
vis/xprop/1.2.5-GCCcore-11.3.0 | |
/usr/share/modulefiles: | |
mpi/mpich-x86_64 | |
pmi/pmix-x86_64 | |
/usr/share/lmod/lmod/modulefiles/Core: | |
lmod | |
settarg | |
/rds/bear-apps/system/modules: | |
bb-singularity-conf/live | |
bb-variables/live | |
bear-apps-unsupported/2017a/live | |
bear-apps-unsupported/2018a/live | |
bear-apps-unsupported/handbuilt/2016 | |
bear-apps-unsupported/handbuilt/2017 | |
bear-apps-unsupported/handbuilt/2018 | |
bear-apps/2018b/live | |
bear-apps/2019a/live | |
bear-apps/2019b/live | |
bear-apps/2020a/live | |
bear-apps/2020b/live | |
bear-apps/2021a/live | |
bear-apps/2021b/live | |
bear-apps/2022a/live | |
bear-apps/2022b/live | |
bear-apps/auto-load | |
bear-apps/handbuilt/2019 | |
bear-apps/handbuilt/2020 | |
bear-licences/live | |
bear-sysadmin/live | |
beardefault | |
bluebear/live | |
eb-conf/github | |
eb-conf/2018a | |
eb-conf/2018b | |
eb-conf/2019a | |
eb-conf/2019b | |
eb-conf/2020a | |
eb-conf/2020b | |
eb-conf/2021a | |
eb-rds/2018b | |
eb-rds/2019a | |
eb-rds/2019b | |
eb-rds/2020a | |
eb-rds/2020b | |
eb-rds/2021a | |
openmpi-env/live | |
slurm-helpers/live | |
slurm-interactive/live | |
== 2024-05-08 16:52:20,437 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python --terse --show-hidden avail | |
== 2024-05-08 16:52:20,465 modules.py:611 INFO Checking whether CUDA/11.5.2 exists... | |
== 2024-05-08 16:52:20,466 modules.py:616 INFO Module CUDA/11.5.2 exists (found in list of available modules) | |
== 2024-05-08 16:52:20,466 modules.py:639 INFO Result for existence check of CUDA/11.5.2 module: True | |
== 2024-05-08 16:52:20,466 modules.py:611 INFO Checking whether numactl/2.0.14-GCCcore-11.2.0 exists... | |
== 2024-05-08 16:52:20,466 modules.py:616 INFO Module numactl/2.0.14-GCCcore-11.2.0 exists (found in list of available modules) | |
== 2024-05-08 16:52:20,466 modules.py:639 INFO Result for existence check of numactl/2.0.14-GCCcore-11.2.0 module: True | |
== 2024-05-08 16:52:20,466 modules.py:611 INFO Checking whether GCCcore/11.2.0 exists... | |
== 2024-05-08 16:52:20,466 modules.py:619 INFO Module GCCcore/11.2.0 not found in list of available modules, checking via 'module show'... | |
== 2024-05-08 16:52:20,466 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python show GCCcore/11.2.0' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1 | |
== 2024-05-08 16:52:21,495 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
import os | |
os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
os.environ["_ModuleTable001_"] = "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"; | |
os.environ["_ModuleTable002_"] = "bGVzIl0gPSB7CmZuID0gIi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzL2JiLXZhcmlhYmxlcy9saXZlIiwKZnVsbE5hbWUgPSAiYmItdmFyaWFibGVzL2xpdmUiLApsb2FkT3JkZXIgPSAxLApwcm9wVCA9IHt9LApzdGFja0RlcHRoID0gMSwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gImJiLXZhcmlhYmxlcyIsCndWID0gIl5saXZlLip6ZmluYWwiLAp9LApbImJlYXItYXBwcy8yMDE4YiJdID0gewpmbiA9ICIvcmRzL2JlYXItYXBwcy9zeXN0ZW0vbW9kdWxlcy9iZWFyLWFwcHMvMjAxOGIvbGl2ZSIsCmZ1bGxOYW1lID0gImJlYXItYXBwcy8yMDE4Yi9saXZlIiwKbG9hZE9yZGVyID0gNiwKcHJvcFQgPSB7fSwKc3RhY2tEZXB0aCA9IDIsCnN0YXR1cyA9ICJh"; | |
os.environ["_ModuleTable003_"] = "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"; | |
os.environ["_ModuleTable004_"] = "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"; | |
os.environ["_ModuleTable005_"] = "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"; | |
os.environ["_ModuleTable006_"] = "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"; | |
os.environ["_ModuleTable007_"] = "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"; | |
os.environ["_ModuleTable008_"] = "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"; | |
os.environ["_ModuleTable009_"] = "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"; | |
os.environ["_ModuleTable010_"] = "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"; | |
os.environ["_ModuleTable011_"] = "b2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo="; | |
os.environ["_ModuleTable_Sz_"] = "11"; | |
_mlstatus = True | |
== 2024-05-08 16:52:21,495 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/GCCcore/11.2.0.lua: | |
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
help([[ | |
Description | |
=========== | |
The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, | |
as well as libraries for these languages (libstdc++, libgcj,...). | |
More information | |
================ | |
- Homepage: https://gcc.gnu.org/ | |
]]) | |
whatis("Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, | |
as well as libraries for these languages (libstdc++, libgcj,...).") | |
whatis("Homepage: https://gcc.gnu.org/") | |
whatis("URL: https://gcc.gnu.org/") | |
conflict("GCCcore") | |
prepend_path("CMAKE_LIBRARY_PATH","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib64") | |
prepend_path("CMAKE_PREFIX_PATH","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0") | |
prepend_path("LD_LIBRARY_PATH","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib64") | |
prepend_path("MANPATH","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share/man") | |
prepend_path("PATH","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin") | |
prepend_path("XDG_DATA_DIRS","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share") | |
setenv("EBROOTGCCCORE","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0") | |
setenv("EBVERSIONGCCCORE","11.2.0") | |
setenv("EBDEVELGCCCORE","/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/easybuild/GCCcore-11.2.0-easybuild-devel") | |
== 2024-05-08 16:52:21,495 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python show GCCcore/11.2.0 | |
== 2024-05-08 16:52:21,496 modules.py:639 INFO Result for existence check of GCCcore/11.2.0 module: True | |
== 2024-05-08 16:52:21,498 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python --terse list' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1 | |
== 2024-05-08 16:52:21,547 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
import os | |
os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
os.environ["_ModuleTable001_"] = "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"; | |
os.environ["_ModuleTable002_"] = "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"; | |
os.environ["_ModuleTable003_"] = "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"; | |
os.environ["_ModuleTable004_"] = "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"; | |
os.environ["_ModuleTable005_"] = "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"; | |
os.environ["_ModuleTable006_"] = "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"; | |
os.environ["_ModuleTable007_"] = "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"; | |
os.environ["_ModuleTable008_"] = "ZSA9ICJiZWFyLWxpY2VuY2VzIiwKd1YgPSAiXmxpdmUuKnpmaW5hbCIsCn0sCmJsdWViZWFyID0gewpmbiA9ICIvcmRzL2JlYXItYXBwcy9zeXN0ZW0vbW9kdWxlcy9ibHVlYmVhci9saXZlIiwKZnVsbE5hbWUgPSAiYmx1ZWJlYXIvbGl2ZSIsCmxvYWRPcmRlciA9IDE0LApwcm9wVCA9IHt9LApzdGFja0RlcHRoID0gMCwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gImJsdWViZWFyIiwKd1YgPSAiXmxpdmUuKnpmaW5hbCIsCn0sClsib3Blbm1waS1lbnYiXSA9IHsKZm4gPSAiL3Jkcy9iZWFyLWFwcHMvc3lzdGVtL21vZHVsZXMvb3Blbm1waS1lbnYvbGl2ZSIsCmZ1bGxOYW1lID0gIm9wZW5tcGktZW52L2xpdmUiLApsb2FkT3JkZXIgPSAzLApwcm9wVCA9IHt9LApz"; | |
os.environ["_ModuleTable009_"] = "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"; | |
os.environ["_ModuleTable010_"] = "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"; | |
os.environ["_ModuleTable011_"] = "b2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo="; | |
os.environ["_ModuleTable_Sz_"] = "11"; | |
_mlstatus = True | |
== 2024-05-08 16:52:21,547 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
bb-variables/live | |
slurm-helpers/live | |
openmpi-env/live | |
bear-licences/live | |
bb-singularity-conf/live | |
bear-apps/2018b/live | |
bear-apps/2019a/live | |
bear-apps/2019b/live | |
bear-apps/handbuilt/2020 | |
bear-apps/2020a/live | |
bear-apps/2020b/live | |
bear-apps/2021a/live | |
bear-apps/auto-load | |
bluebear/live | |
== 2024-05-08 16:52:21,547 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python --terse list | |
== 2024-05-08 16:52:21,548 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python load GCCcore/11.2.0' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1 | |
== 2024-05-08 16:52:22,613 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
import os | |
os.environ["__LMOD_REF_COUNT_CMAKE_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib64:1"; | |
os.environ["CMAKE_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib64"; | |
os.environ["__LMOD_REF_COUNT_CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0:1"; | |
os.environ["CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0"; | |
os.environ["EBDEVELGCCCORE"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/easybuild/GCCcore-11.2.0-easybuild-devel"; | |
os.environ["EBROOTGCCCORE"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0"; | |
os.environ["EBVERSIONGCCCORE"] = "11.2.0"; | |
os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib64:1"; | |
os.environ["LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib64"; | |
os.environ["LOADEDMODULES"] = "bb-variables/live:slurm-helpers/live:openmpi-env/live:bear-licences/live:bb-singularity-conf/live:bear-apps/2018b/live:bear-apps/2019a/live:bear-apps/2019b/live:bear-apps/handbuilt/2020:bear-apps/2020a/live:bear-apps/2020b/live:bear-apps/2021a/live:bear-apps/auto-load:bluebear/live:GCCcore/11.2.0"; | |
os.environ["__LMOD_REF_COUNT_MANPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share/man:1;/usr/share/lmod/lmod/share/man:1;:1"; | |
os.environ["MANPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share/man:/usr/share/lmod/lmod/share/man::"; | |
os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
os.environ["__LMOD_REF_COUNT_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:1;/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:1;/rds/bear-apps/bin:2;/rds/bear-apps/system/software/slurm-helpers:1;/rds/homes/b/branfosj/.yarn/bin:1;/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:1;/usr/lpp/mmfs/bin:1;/usr/local/bin:1;/usr/bin:1;/usr/local/sbin:1;/usr/sbin:1;/rds/homes/b/branfosj/.local/bin:1;/rds/homes/b/branfosj/bin:1;/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:2;/rds/projects/b/branfosj-bear-apps/apps_scripts:1"; | |
os.environ["PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts"; | |
os.environ["__LMOD_REF_COUNT_XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share:1"; | |
os.environ["XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share"; | |
os.environ["_LMFILES_"] = "/rds/bear-apps/system/modules/bb-variables/live:/rds/bear-apps/system/modules/slurm-helpers/live:/rds/bear-apps/system/modules/openmpi-env/live:/rds/bear-apps/system/modules/bear-licences/live:/rds/bear-apps/system/modules/bb-singularity-conf/live:/rds/bear-apps/system/modules/bear-apps/2018b/live:/rds/bear-apps/system/modules/bear-apps/2019a/live:/rds/bear-apps/system/modules/bear-apps/2019b/live:/rds/bear-apps/system/modules/bear-apps/handbuilt/2020:/rds/bear-apps/system/modules/bear-apps/2020a/live:/rds/bear-apps/system/modules/bear-apps/2020b/live:/rds/bear-apps/system/modules/bear-apps/2021a/live:/rds/bear-apps/system/modules/bear-apps/auto-load:/rds/bear-apps/system/modules/bluebear/live:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/GCCcore/11.2.0.lua"; | |
os.environ["_ModuleTable001_"] = "X01vZHVsZVRhYmxlXyA9IHsKTVR2ZXJzaW9uID0gMywKY19yZWJ1aWxkVGltZSA9IDcyMDAuMCwKY19zaG9ydFRpbWUgPSAwLjI0NTE2ODkyNDMzMTY3LApkZXB0aFQgPSB7fSwKZmFtaWx5ID0ge30sCm1UID0gewpHQ0Njb3JlID0gewpmbiA9ICIvcmRzL3Byb2plY3RzLzIwMTcvYnJhbmZvc2otcnNlL2Vhc3lidWlsZC9FTDgtaWNlL21vZHVsZXMvYWxsL0dDQ2NvcmUvMTEuMi4wLmx1YSIsCmZ1bGxOYW1lID0gIkdDQ2NvcmUvMTEuMi4wIiwKbG9hZE9yZGVyID0gMTUsCnByb3BUID0ge30sCnN0YWNrRGVwdGggPSAwLApzdGF0dXMgPSAiYWN0aXZlIiwKdXNlck5hbWUgPSAiR0NDY29yZS8xMS4yLjAiLAp3ViA9ICIwMDAwMDAwMTEuMDAwMDAwMDAyLip6ZmluYWwiLAp9LApb"; | |
os.environ["_ModuleTable002_"] = "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"; | |
os.environ["_ModuleTable003_"] = "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"; | |
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os.environ["_ModuleTable007_"] = "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"; | |
os.environ["_ModuleTable008_"] = "PSAiYWN0aXZlIiwKdXNlck5hbWUgPSAiYmVhci1hcHBzL2hhbmRidWlsdC8yMDIwIiwKd1YgPSAiMDAwMDAyMDIwLip6ZmluYWwiLAp9LApbImJlYXItbGljZW5jZXMiXSA9IHsKZm4gPSAiL3Jkcy9iZWFyLWFwcHMvc3lzdGVtL21vZHVsZXMvYmVhci1saWNlbmNlcy9saXZlIiwKZnVsbE5hbWUgPSAiYmVhci1saWNlbmNlcy9saXZlIiwKbG9hZE9yZGVyID0gNCwKcHJvcFQgPSB7fSwKc3RhY2tEZXB0aCA9IDEsCnN0YXR1cyA9ICJhY3RpdmUiLAp1c2VyTmFtZSA9ICJiZWFyLWxpY2VuY2VzIiwKd1YgPSAiXmxpdmUuKnpmaW5hbCIsCn0sCmJsdWViZWFyID0gewpmbiA9ICIvcmRzL2JlYXItYXBwcy9zeXN0ZW0vbW9kdWxlcy9ibHVlYmVhci9saXZlIiwKZnVsbE5hbWUgPSAi"; | |
os.environ["_ModuleTable009_"] = "Ymx1ZWJlYXIvbGl2ZSIsCmxvYWRPcmRlciA9IDE0LApwcm9wVCA9IHt9LApzdGFja0RlcHRoID0gMCwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gImJsdWViZWFyIiwKd1YgPSAiXmxpdmUuKnpmaW5hbCIsCn0sClsib3Blbm1waS1lbnYiXSA9IHsKZm4gPSAiL3Jkcy9iZWFyLWFwcHMvc3lzdGVtL21vZHVsZXMvb3Blbm1waS1lbnYvbGl2ZSIsCmZ1bGxOYW1lID0gIm9wZW5tcGktZW52L2xpdmUiLApsb2FkT3JkZXIgPSAzLApwcm9wVCA9IHt9LApzdGFja0RlcHRoID0gMSwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gIm9wZW5tcGktZW52IiwKd1YgPSAiXmxpdmUuKnpmaW5hbCIsCn0sClsic2x1cm0taGVscGVycyJdID0gewpmbiA9ICIvcmRzL2JlYXIt"; | |
os.environ["_ModuleTable010_"] = "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"; | |
os.environ["_ModuleTable011_"] = "cmUvbW9kdWxlZmlsZXMvTGludXgiCiwgIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZSIsICIvdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIiwgIi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfSwKc3lzdGVtQmFzZU1QQVRIID0gIi9ldGMvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4Oi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZTovdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo="; | |
os.environ["_ModuleTable_Sz_"] = "11"; | |
_mlstatus = True | |
== 2024-05-08 16:52:22,613 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
== 2024-05-08 16:52:22,613 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python load GCCcore/11.2.0 | |
== 2024-05-08 16:52:22,614 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python --terse list' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1 | |
== 2024-05-08 16:52:22,666 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
import os | |
os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
os.environ["_ModuleTable001_"] = "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"; | |
os.environ["_ModuleTable002_"] = "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"; | |
os.environ["_ModuleTable003_"] = "LApzdGFja0RlcHRoID0gMSwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gImJiLXZhcmlhYmxlcyIsCndWID0gIl5saXZlLip6ZmluYWwiLAp9LApbImJlYXItYXBwcy8yMDE4YiJdID0gewpmbiA9ICIvcmRzL2JlYXItYXBwcy9zeXN0ZW0vbW9kdWxlcy9iZWFyLWFwcHMvMjAxOGIvbGl2ZSIsCmZ1bGxOYW1lID0gImJlYXItYXBwcy8yMDE4Yi9saXZlIiwKbG9hZE9yZGVyID0gNiwKcHJvcFQgPSB7fSwKc3RhY2tEZXB0aCA9IDIsCnN0YXR1cyA9ICJhY3RpdmUiLAp1c2VyTmFtZSA9ICJiZWFyLWFwcHMvMjAxOGIiLAp3ViA9ICJebGl2ZS4qemZpbmFsIiwKfSwKWyJiZWFyLWFwcHMvMjAxOWEiXSA9IHsKZm4gPSAiL3Jkcy9iZWFyLWFwcHMvc3lzdGVtL21vZHVsZXMv"; | |
os.environ["_ModuleTable004_"] = "YmVhci1hcHBzLzIwMTlhL2xpdmUiLApmdWxsTmFtZSA9ICJiZWFyLWFwcHMvMjAxOWEvbGl2ZSIsCmxvYWRPcmRlciA9IDcsCnByb3BUID0ge30sCnN0YWNrRGVwdGggPSAyLApzdGF0dXMgPSAiYWN0aXZlIiwKdXNlck5hbWUgPSAiYmVhci1hcHBzLzIwMTlhIiwKd1YgPSAiXmxpdmUuKnpmaW5hbCIsCn0sClsiYmVhci1hcHBzLzIwMTliIl0gPSB7CmZuID0gIi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzL2JlYXItYXBwcy8yMDE5Yi9saXZlIiwKZnVsbE5hbWUgPSAiYmVhci1hcHBzLzIwMTliL2xpdmUiLApsb2FkT3JkZXIgPSA4LApwcm9wVCA9IHt9LApzdGFja0RlcHRoID0gMiwKc3RhdHVzID0gImFjdGl2ZSIsCnVzZXJOYW1lID0gImJlYXItYXBwcy8yMDE5YiIs"; | |
os.environ["_ModuleTable005_"] = "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"; | |
os.environ["_ModuleTable006_"] = "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"; | |
os.environ["_ModuleTable007_"] = "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"; | |
os.environ["_ModuleTable008_"] = "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"; | |
os.environ["_ModuleTable009_"] = "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"; | |
os.environ["_ModuleTable010_"] = "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"; | |
os.environ["_ModuleTable011_"] = "cmUvbW9kdWxlZmlsZXMvTGludXgiCiwgIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZSIsICIvdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIiwgIi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfSwKc3lzdGVtQmFzZU1QQVRIID0gIi9ldGMvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4Oi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZTovdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlOi9yZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzIiwKfQo="; | |
os.environ["_ModuleTable_Sz_"] = "11"; | |
_mlstatus = True | |
== 2024-05-08 16:52:22,666 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
bb-variables/live | |
slurm-helpers/live | |
openmpi-env/live | |
bear-licences/live | |
bb-singularity-conf/live | |
bear-apps/2018b/live | |
bear-apps/2019a/live | |
bear-apps/2019b/live | |
bear-apps/handbuilt/2020 | |
bear-apps/2020a/live | |
bear-apps/2020b/live | |
bear-apps/2021a/live | |
bear-apps/auto-load | |
bluebear/live | |
GCCcore/11.2.0 | |
== 2024-05-08 16:52:22,666 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python --terse list | |
== 2024-05-08 16:52:22,667 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python load CUDA/11.5.2' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1 | |
== 2024-05-08 16:52:23,765 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
import os | |
os.environ["__LMOD_REF_COUNT_CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0:1"; | |
os.environ["CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0"; | |
os.environ["__LMOD_REF_COUNT_CPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/include:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/extras/CUPTI/include:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/include:1"; | |
os.environ["CPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/include:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/extras/CUPTI/include:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/include"; | |
os.environ["CUDA_HOME"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2"; | |
os.environ["CUDA_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2"; | |
os.environ["CUDA_ROOT"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2"; | |
os.environ["EBDEVELCUDA"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/easybuild/CUDA-11.5.2-easybuild-devel"; | |
os.environ["EBROOTCUDA"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2"; | |
os.environ["EBVERSIONCUDA"] = "11.5.2"; | |
os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/lib64:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/extras/CUPTI/lib64:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib:1"; | |
os.environ["LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/extras/CUPTI/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib"; | |
os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/stubs/lib64:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib:1"; | |
os.environ["LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/stubs/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib"; | |
os.environ["LOADEDMODULES"] = "bb-variables/live:slurm-helpers/live:openmpi-env/live:bear-licences/live:bb-singularity-conf/live:bear-apps/2018b/live:bear-apps/2019a/live:bear-apps/2019b/live:bear-apps/handbuilt/2020:bear-apps/2020a/live:bear-apps/2020b/live:bear-apps/2021a/live:bear-apps/auto-load:bluebear/live:GCCcore/11.2.0:CUDA/11.5.2"; | |
os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
os.environ["__LMOD_REF_COUNT_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:1;/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:1;/rds/bear-apps/bin:2;/rds/bear-apps/system/software/slurm-helpers:1;/rds/homes/b/branfosj/.yarn/bin:1;/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:1;/usr/lpp/mmfs/bin:1;/usr/local/bin:1;/usr/bin:1;/usr/local/sbin:1;/usr/sbin:1;/rds/homes/b/branfosj/.local/bin:1;/rds/homes/b/branfosj/bin:1;/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:2;/rds/projects/b/branfosj-bear-apps/apps_scripts:1"; | |
os.environ["PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts"; | |
os.environ["__LMOD_REF_COUNT_PKG_CONFIG_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/pkgconfig:1"; | |
os.environ["PKG_CONFIG_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/pkgconfig"; | |
os.environ["__LMOD_REF_COUNT_XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/share:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share:1"; | |
os.environ["XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/share:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share"; | |
os.environ["_LMFILES_"] = "/rds/bear-apps/system/modules/bb-variables/live:/rds/bear-apps/system/modules/slurm-helpers/live:/rds/bear-apps/system/modules/openmpi-env/live:/rds/bear-apps/system/modules/bear-licences/live:/rds/bear-apps/system/modules/bb-singularity-conf/live:/rds/bear-apps/system/modules/bear-apps/2018b/live:/rds/bear-apps/system/modules/bear-apps/2019a/live:/rds/bear-apps/system/modules/bear-apps/2019b/live:/rds/bear-apps/system/modules/bear-apps/handbuilt/2020:/rds/bear-apps/system/modules/bear-apps/2020a/live:/rds/bear-apps/system/modules/bear-apps/2020b/live:/rds/bear-apps/system/modules/bear-apps/2021a/live:/rds/bear-apps/system/modules/bear-apps/auto-load:/rds/bear-apps/system/modules/bluebear/live:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/GCCcore/11.2.0.lua:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/CUDA/11.5.2.lua"; | |
os.environ["_ModuleTable001_"] = "X01vZHVsZVRhYmxlXyA9IHsKTVR2ZXJzaW9uID0gMywKY19yZWJ1aWxkVGltZSA9IDcyMDAuMCwKY19zaG9ydFRpbWUgPSAwLjI0NTE2ODkyNDMzMTY3LApkZXB0aFQgPSB7fSwKZmFtaWx5ID0ge30sCm1UID0gewpDVURBID0gewpmbiA9ICIvcmRzL3Byb2plY3RzLzIwMTcvYnJhbmZvc2otcnNlL2Vhc3lidWlsZC9FTDgtaWNlL21vZHVsZXMvYWxsL0NVREEvMTEuNS4yLmx1YSIsCmZ1bGxOYW1lID0gIkNVREEvMTEuNS4yIiwKbG9hZE9yZGVyID0gMTYsCnByb3BUID0ge30sCnN0YWNrRGVwdGggPSAwLApzdGF0dXMgPSAiYWN0aXZlIiwKdXNlck5hbWUgPSAiQ1VEQS8xMS41LjIiLAp3ViA9ICIwMDAwMDAwMTEuMDAwMDAwMDA1LjAwMDAwMDAwMi4qemZpbmFsIiwKfSwKR0ND"; | |
os.environ["_ModuleTable002_"] = "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"; | |
os.environ["_ModuleTable003_"] = "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"; | |
os.environ["_ModuleTable004_"] = "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"; | |
os.environ["_ModuleTable005_"] = "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"; | |
os.environ["_ModuleTable006_"] = "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"; | |
os.environ["_ModuleTable007_"] = "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"; | |
os.environ["_ModuleTable008_"] = "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"; | |
os.environ["_ModuleTable009_"] = "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"; | |
os.environ["_ModuleTable010_"] = "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"; | |
os.environ["_ModuleTable011_"] = "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"; | |
os.environ["_ModuleTable012_"] = "cyIsCn0sCnN5c3RlbUJhc2VNUEFUSCA9ICIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZTovcmRzL2JlYXItYXBwcy9zeXN0ZW0vbW9kdWxlcyIsCn0K"; | |
os.environ["_ModuleTable_Sz_"] = "12"; | |
_mlstatus = True | |
== 2024-05-08 16:52:23,766 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
== 2024-05-08 16:52:23,766 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python load CUDA/11.5.2 | |
== 2024-05-08 16:52:23,766 environment.py:93 INFO Environment variable LD_LIBRARY_PATH set to /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/extras/CUPTI/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib64 (previous value: '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/extras/CUPTI/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib') | |
== 2024-05-08 16:52:23,767 run.py:396 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python load numactl/2.0.14-GCCcore-11.2.0' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1 | |
== 2024-05-08 16:52:24,781 run.py:496 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
import os | |
os.environ["__LMOD_REF_COUNT_CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0:1"; | |
os.environ["CMAKE_PREFIX_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0"; | |
os.environ["__LMOD_REF_COUNT_CPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/include:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/include:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/extras/CUPTI/include:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/include:1"; | |
os.environ["CPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/include:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/include:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/extras/CUPTI/include:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/include"; | |
os.environ["EBDEVELNUMACTL"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/easybuild/numactl-2.0.14-GCCcore-11.2.0-easybuild-devel"; | |
os.environ["EBROOTNUMACTL"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0"; | |
os.environ["EBVERSIONNUMACTL"] = "2.0.14"; | |
os.environ["__LMOD_REF_COUNT_LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib:1"; | |
os.environ["LD_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib"; | |
os.environ["__LMOD_REF_COUNT_LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/stubs/lib64:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib:1"; | |
os.environ["LIBRARY_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/stubs/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib"; | |
os.environ["LOADEDMODULES"] = "bb-variables/live:slurm-helpers/live:openmpi-env/live:bear-licences/live:bb-singularity-conf/live:bear-apps/2018b/live:bear-apps/2019a/live:bear-apps/2019b/live:bear-apps/handbuilt/2020:bear-apps/2020a/live:bear-apps/2020b/live:bear-apps/2021a/live:bear-apps/auto-load:bluebear/live:GCCcore/11.2.0:CUDA/11.5.2:numactl/2.0.14-GCCcore-11.2.0"; | |
os.environ["__LMOD_REF_COUNT_MANPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/share/man:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share/man:1;/usr/share/lmod/lmod/share/man:1;:1"; | |
os.environ["MANPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/share/man:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share/man:/usr/share/lmod/lmod/share/man::"; | |
os.environ["MODULEPATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core:/rds/bear-apps/system/modules"; | |
os.environ["__LMOD_REF_COUNT_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:1;/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:1;/rds/bear-apps/bin:2;/rds/bear-apps/system/software/slurm-helpers:1;/rds/homes/b/branfosj/.yarn/bin:1;/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:1;/usr/lpp/mmfs/bin:1;/usr/local/bin:1;/usr/bin:1;/usr/local/sbin:1;/usr/sbin:1;/rds/homes/b/branfosj/.local/bin:1;/rds/homes/b/branfosj/bin:1;/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:2;/rds/projects/b/branfosj-bear-apps/apps_scripts:1"; | |
os.environ["PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts"; | |
os.environ["__LMOD_REF_COUNT_PKG_CONFIG_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib/pkgconfig:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/pkgconfig:1"; | |
os.environ["PKG_CONFIG_PATH"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib/pkgconfig:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/pkgconfig"; | |
os.environ["__LMOD_REF_COUNT_XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/share:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/share:1;/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share:1"; | |
os.environ["XDG_DATA_DIRS"] = "/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/share:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/share:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/share"; | |
os.environ["_LMFILES_"] = "/rds/bear-apps/system/modules/bb-variables/live:/rds/bear-apps/system/modules/slurm-helpers/live:/rds/bear-apps/system/modules/openmpi-env/live:/rds/bear-apps/system/modules/bear-licences/live:/rds/bear-apps/system/modules/bb-singularity-conf/live:/rds/bear-apps/system/modules/bear-apps/2018b/live:/rds/bear-apps/system/modules/bear-apps/2019a/live:/rds/bear-apps/system/modules/bear-apps/2019b/live:/rds/bear-apps/system/modules/bear-apps/handbuilt/2020:/rds/bear-apps/system/modules/bear-apps/2020a/live:/rds/bear-apps/system/modules/bear-apps/2020b/live:/rds/bear-apps/system/modules/bear-apps/2021a/live:/rds/bear-apps/system/modules/bear-apps/auto-load:/rds/bear-apps/system/modules/bluebear/live:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/GCCcore/11.2.0.lua:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/CUDA/11.5.2.lua:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/modules/all/numactl/2.0.14-GCCcore-11.2.0.lua"; | |
os.environ["_ModuleTable001_"] = "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"; | |
os.environ["_ModuleTable002_"] = "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"; | |
os.environ["_ModuleTable003_"] = "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"; | |
os.environ["_ModuleTable004_"] = "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"; | |
os.environ["_ModuleTable005_"] = "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"; | |
os.environ["_ModuleTable006_"] = "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"; | |
os.environ["_ModuleTable007_"] = "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"; | |
os.environ["_ModuleTable008_"] = "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"; | |
os.environ["_ModuleTable009_"] = "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"; | |
os.environ["_ModuleTable010_"] = "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"; | |
os.environ["_ModuleTable011_"] = "ZHMvYmVhci1hcHBzL3N5c3RlbS9tb2R1bGVzL29wZW5tcGktZW52L2xpdmUiLApmdWxsTmFtZSA9ICJvcGVubXBpLWVudi9saXZlIiwKbG9hZE9yZGVyID0gMywKcHJvcFQgPSB7fSwKc3RhY2tEZXB0aCA9IDEsCnN0YXR1cyA9ICJhY3RpdmUiLAp1c2VyTmFtZSA9ICJvcGVubXBpLWVudiIsCndWID0gIl5saXZlLip6ZmluYWwiLAp9LApbInNsdXJtLWhlbHBlcnMiXSA9IHsKZm4gPSAiL3Jkcy9iZWFyLWFwcHMvc3lzdGVtL21vZHVsZXMvc2x1cm0taGVscGVycy9saXZlIiwKZnVsbE5hbWUgPSAic2x1cm0taGVscGVycy9saXZlIiwKbG9hZE9yZGVyID0gMiwKcHJvcFQgPSB7fSwKc3RhY2tEZXB0aCA9IDEsCnN0YXR1cyA9ICJhY3RpdmUiLAp1c2VyTmFtZSA9ICJzbHVybS1o"; | |
os.environ["_ModuleTable012_"] = "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"; | |
os.environ["_ModuleTable013_"] = "L21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZTovcmRzL2JlYXItYXBwcy9zeXN0ZW0vbW9kdWxlcyIsCn0K"; | |
os.environ["_ModuleTable_Sz_"] = "13"; | |
_mlstatus = True | |
== 2024-05-08 16:52:24,781 run.py:497 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
== 2024-05-08 16:52:24,781 run.py:502 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python load numactl/2.0.14-GCCcore-11.2.0 | |
== 2024-05-08 16:52:24,782 environment.py:93 INFO Environment variable LD_LIBRARY_PATH set to /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/extras/CUPTI/lib64:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib64 (previous value: '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib') | |
== 2024-05-08 16:52:24,791 modules.py:611 INFO Checking whether GCCcore/11.2.0 exists... | |
== 2024-05-08 16:52:24,791 modules.py:619 INFO Module GCCcore/11.2.0 not found in list of available modules, checking via 'module show'... | |
== 2024-05-08 16:52:24,791 modules.py:639 INFO Result for existence check of GCCcore/11.2.0 module: True | |
== 2024-05-08 16:52:24,792 toolchain.py:746 INFO List of toolchain dependency modules and toolchain definition match! | |
== 2024-05-08 16:52:24,813 compiler.py:354 INFO _set_optimal_architecture: using march=native as optarch for x86_64/Intel. | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable CC set to gcc (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable EBVARCC set to gcc (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable CFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable EBVARCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable CPPFLAGS set to -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/include -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/include (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable EBVARCPPFLAGS set to -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/include -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/include (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable CXX set to g++ (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable EBVARCXX set to g++ (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable CXXFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable EBVARCXXFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable F77 set to gfortran (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable EBVARF77 set to gfortran (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable F90 set to gfortran (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable EBVARF90 set to gfortran (previously undefined) | |
== 2024-05-08 16:52:24,873 environment.py:93 INFO Environment variable F90FLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable EBVARF90FLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable FC set to gfortran (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable EBVARFC set to gfortran (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable FCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable EBVARFCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable FFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable EBVARFFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable FLIBS set to -lgfortran (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable EBVARFLIBS set to -lgfortran (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable LDFLAGS set to -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable EBVARLDFLAGS set to -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/lib -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/lib -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib64 -L/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/lib (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable LIBS set to -lm -lpthread (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable EBVARLIBS set to -lm -lpthread (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable OPTFLAGS set to -O2 -ftree-vectorize -march=native (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable EBVAROPTFLAGS set to -O2 -ftree-vectorize -march=native (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable PRECFLAGS set to -fno-math-errno (previously undefined) | |
== 2024-05-08 16:52:24,874 environment.py:93 INFO Environment variable EBVARPRECFLAGS set to -fno-math-errno (previously undefined) | |
== 2024-05-08 16:52:24,874 toolchain.py:941 INFO Putting RPATH wrappers in place... | |
== 2024-05-08 16:52:24,888 filetools.py:512 INFO Command gcc found at /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin/gcc | |
== 2024-05-08 16:52:24,888 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:24,888 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper/gcc | |
== 2024-05-08 16:52:24,888 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
== 2024-05-08 16:52:24,888 filetools.py:512 INFO Command gcc found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper/gcc | |
== 2024-05-08 16:52:24,888 toolchain.py:1025 INFO RPATH wrapper script for /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin/gcc: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper/gcc (log: /dev/null) | |
== 2024-05-08 16:52:24,901 filetools.py:512 INFO Command g++ found at /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin/g++ | |
== 2024-05-08 16:52:24,902 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:24,902 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper/g++ | |
== 2024-05-08 16:52:24,902 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
== 2024-05-08 16:52:24,902 filetools.py:512 INFO Command g++ found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper/g++ | |
== 2024-05-08 16:52:24,902 toolchain.py:1025 INFO RPATH wrapper script for /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin/g++: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper/g++ (log: /dev/null) | |
== 2024-05-08 16:52:24,909 filetools.py:512 INFO Command gfortran found at /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin/gfortran | |
== 2024-05-08 16:52:24,910 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:24,910 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper/gfortran | |
== 2024-05-08 16:52:24,910 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
== 2024-05-08 16:52:24,910 filetools.py:512 INFO Command gfortran found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper/gfortran | |
== 2024-05-08 16:52:24,910 toolchain.py:1025 INFO RPATH wrapper script for /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin/gfortran: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper/gfortran (log: /dev/null) | |
== 2024-05-08 16:52:24,910 filetools.py:512 INFO Command ld found at /usr/bin/ld | |
== 2024-05-08 16:52:24,910 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:24,910 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld_wrapper/ld | |
== 2024-05-08 16:52:24,910 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
== 2024-05-08 16:52:24,911 filetools.py:512 INFO Command ld found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld_wrapper/ld | |
== 2024-05-08 16:52:24,911 toolchain.py:1025 INFO RPATH wrapper script for /usr/bin/ld: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld_wrapper/ld (log: /dev/null) | |
== 2024-05-08 16:52:24,911 filetools.py:512 INFO Command ld.gold found at /usr/bin/ld.gold | |
== 2024-05-08 16:52:24,911 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.gold_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:24,911 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.gold_wrapper/ld.gold | |
== 2024-05-08 16:52:24,911 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.gold_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
== 2024-05-08 16:52:24,911 filetools.py:512 INFO Command ld.gold found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.gold_wrapper/ld.gold | |
== 2024-05-08 16:52:24,911 toolchain.py:1025 INFO RPATH wrapper script for /usr/bin/ld.gold: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.gold_wrapper/ld.gold (log: /dev/null) | |
== 2024-05-08 16:52:24,911 filetools.py:512 INFO Command ld.bfd found at /usr/bin/ld.bfd | |
== 2024-05-08 16:52:24,911 filetools.py:1897 INFO Creating directory /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.bfd_wrapper (parents: True, set_gid: False, sticky: False) | |
== 2024-05-08 16:52:24,912 filetools.py:1749 INFO Adjusting permissions recursively for /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.bfd_wrapper/ld.bfd | |
== 2024-05-08 16:52:24,912 environment.py:93 INFO Environment variable PATH set to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.bfd_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.gold_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts (previous value: '/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.gold_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gfortran_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gxx_wrapper:/dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/gcc_wrapper:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/numactl/2.0.14-GCCcore-11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/nvvm/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/bin:/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/GCCcore/11.2.0/bin:/rds/projects/2017/branfosj-rse/easybuild/venv-dev-EL8/bin:/rds/bear-apps/bin:/rds/bear-apps/system/software/slurm-helpers:/rds/homes/b/branfosj/.yarn/bin:/rds/homes/b/branfosj/.config/yarn/global/node_modules/.bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/rds/homes/b/branfosj/.local/bin:/rds/homes/b/branfosj/bin:/rds/projects/b/branfosj-bear-apps/apps_scripts/fisbatch:/rds/projects/b/branfosj-bear-apps/apps_scripts') | |
== 2024-05-08 16:52:24,912 filetools.py:512 INFO Command ld.bfd found at /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.bfd_wrapper/ld.bfd | |
== 2024-05-08 16:52:24,912 toolchain.py:1025 INFO RPATH wrapper script for /usr/bin/ld.bfd: /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/tmpq2i882hl/rpath_wrappers/ld.bfd_wrapper/ld.bfd (log: /dev/null) | |
== 2024-05-08 16:52:24,912 easyblock.py:1172 INFO Enabling CUDA PTX cache of size 1024 MiB at /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/eb-cuda-cache | |
== 2024-05-08 16:52:24,912 environment.py:93 INFO Environment variable CUDA_CACHE_DISABLE set to 0 (previously undefined) | |
== 2024-05-08 16:52:24,912 environment.py:93 INFO Environment variable CUDA_CACHE_PATH set to /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/eb-cuda-cache (previously undefined) | |
== 2024-05-08 16:52:24,912 environment.py:93 INFO Environment variable CUDA_CACHE_MAXSIZE set to 1073741824 (previously undefined) | |
== 2024-05-08 16:52:24,912 easyblock.py:2141 INFO Using /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/ as start dir | |
== 2024-05-08 16:52:24,912 hooks.py:215 INFO Found post_prepare_hook hook | |
== 2024-05-08 16:52:24,912 hooks.py:249 INFO Running 'post_prepare_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4cba5908>], keyword args: {})... | |
== 2024-05-08 16:52:24,912 build_log.py:267 INFO ... (took 6 secs) | |
== 2024-05-08 16:52:24,914 easyblock.py:3940 INFO Skipping configure step (skip: None, skipsteps: ['configure']) | |
== 2024-05-08 16:52:24,914 build_log.py:267 INFO configuring [skipped] | |
== 2024-05-08 16:52:24,916 build_log.py:267 INFO building... | |
== 2024-05-08 16:52:24,918 easyblock.py:3979 INFO Starting build step | |
== 2024-05-08 16:52:24,918 easyconfig.py:1680 INFO Generating template values... | |
== 2024-05-08 16:52:24,918 easyconfig.py:1699 INFO Template values: arch='x86_64', bitbucket_account='psm2', builddir='/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0', cuda_cc_cmake='80', cuda_cc_semicolon_sep='8.0', cuda_cc_space_sep='8.0', cuda_compute_capabilities='8.0', cuda_int_comma_sep='80', cuda_int_semicolon_sep='80', cuda_int_space_sep='80', cuda_sm_comma_sep='sm_80', cuda_sm_space_sep='sm_80', cudamajver='11', cudaminver='5', cudashortver='11.5', cudaver='11.5.2', github_account='psm2', installdir='/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/PSM2/12.0.1-GCCcore-11.2.0', module_name='PSM2/12.0.1-GCCcore-11.2.0', name='PSM2', nameletter='P', nameletterlower='p', namelower='psm2', parallel='8', start_dir='/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/', sysroot='', toolchain_name='GCCcore', toolchain_version='11.2.0', version='12.0.1', version_major='12', version_major_minor='12.0', version_minor='0', versionprefix='', versionsuffix='' | |
== 2024-05-08 16:52:24,918 hooks.py:215 INFO Found pre_build_hook hook | |
== 2024-05-08 16:52:24,918 hooks.py:249 INFO Running 'pre_build_hook' hook function (args: [<easybuild.easyblocks.generic.configuremake.ConfigureMake object at 0x7fcc4cba5908>], keyword args: {})... | |
== 2024-05-08 16:52:25,121 easyblock.py:3987 INFO Running method build_step part of step build | |
== 2024-05-08 16:52:25,121 configuremake.py:355 INFO Building target '' | |
== 2024-05-08 16:52:25,121 run.py:339 INFO run_shell_cmd: Output of "sed -i 's|fprintf(stderr,|_HFI_DBG(|' psm_context.c && sed -i 's|/usr|/|' Makefile && make -j 8 arch=x86_64 USE_PSM_UUID=1 PSM_CUDA=1 WERROR=" will be logged to /dev/shm/branfosj/tmp-up-EL8/eb-eb9lbxql/run-shell-cmd-output/sed-l_o47876/out.txt | |
== 2024-05-08 16:52:25,124 run.py:374 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
== 2024-05-08 16:52:25,124 run.py:396 INFO Running shell command 'sed -i 's|fprintf(stderr,|_HFI_DBG(|' psm_context.c && sed -i 's|/usr|/|' Makefile && make -j 8 arch=x86_64 USE_PSM_UUID=1 PSM_CUDA=1 WERROR=' in /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1 | |
== 2024-05-08 16:52:26,651 run.py:499 INFO Output of 'sed ...' shell command (stdout + stderr): | |
mkdir -p /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/build_release | |
# Our buildflags.mak exports all variables, all are propogated to submakes. | |
make[1]: warning: -j2 forced in submake: resetting jobserver mode. | |
make[1]: Entering directory '/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/ptl_self' | |
gcc -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC -pthread -Wall -mavx2 -D_DEFAULT_SOURCE -D_SVID_SOURCE -D_BSD_SOURCE -O3 -g3 -DNVIDIA_GPU_DIRECT -DPSM_CUDA -fpic -fPIC -D_GNU_SOURCE -funwind-tables -Wno-strict-aliasing -Wformat-security -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/include -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/mpspawn -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/include/linux-x86_64 -I/usr/include/uapi -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/include -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1 -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/ptl_ips -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/build_release -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/ptl_self/.. /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/ptl_self/ptl.c -MM -MF /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.d -MQ /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.o | |
gcc -O2 -ftree-vectorize -march=native -fno-math-errno -fPIC -pthread -Wall -mavx2 -D_DEFAULT_SOURCE -D_SVID_SOURCE -D_BSD_SOURCE -O3 -g3 -DNVIDIA_GPU_DIRECT -DPSM_CUDA -fpic -fPIC -D_GNU_SOURCE -funwind-tables -Wno-strict-aliasing -Wformat-security -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/include -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/mpspawn -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/include/linux-x86_64 -I/usr/include/uapi -I/rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/CUDA/11.5.2/include -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1 -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/ptl_ips -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/build_release -I/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/ptl_self/.. -c /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/ptl_self/ptl.c -o /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.o | |
as: unrecognized option '--gdwarf-5' | |
make[1]: *** [Makefile:73: /dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/build_release/ptl_self/ptl.o] Error 1 | |
make[1]: Leaving directory '/dev/shm/branfosj/build-up-EL8/PSM2/12.0.1/GCCcore-11.2.0/opa-psm2-PSM2_12.0.1/ptl_self' | |
make: *** [Makefile:301: all] Error 1 | |
== 2024-05-08 16:52:26,651 run.py:504 WARNING Shell command FAILED (exit code 2, see output above): sed -i 's|fprintf(stderr,|_HFI_DBG(|' psm_context.c && sed -i 's|/usr|/|' Makefile && make -j 8 arch=x86_64 USE_PSM_UUID=1 PSM_CUDA=1 WERROR= | |
== 2024-05-08 16:52:26,836 build_log.py:171 ERROR EasyBuild encountered an error (at easybuild/src/easybuild-framework/easybuild/base/exceptions.py:126 in __init__): shell command 'sed ...' failed in build step for PSM2-12.0.1-GCCcore-11.2.0.eb (at easybuild/src/easybuild-framework/easybuild/framework/easyblock.py:4177 in run_all_steps) | |
== 2024-05-08 16:52:26,836 build_log.py:267 INFO ... (took 1 secs) | |
== 2024-05-08 16:52:26,838 filetools.py:1988 INFO Removing lock /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_PSM2_12.0.1-GCCcore-11.2.0.lock... | |
== 2024-05-08 16:52:26,839 filetools.py:384 INFO Path /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_PSM2_12.0.1-GCCcore-11.2.0.lock successfully removed. | |
== 2024-05-08 16:52:26,839 filetools.py:1992 INFO Lock removed: /rds/projects/2017/branfosj-rse/easybuild/EL8-ice/software/.locks/_rds_projects_2017_branfosj-rse_easybuild_EL8-ice_software_PSM2_12.0.1-GCCcore-11.2.0.lock | |
== 2024-05-08 16:52:26,839 easyblock.py:329 INFO Closing log for application name PSM2 version 12.0.1 |
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